• Title/Summary/Keyword: signal sequence

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Novel Synchronization Scheme for Ubiquitous Home Network Systems (유비쿼터스 홈 네트워크 시스템을 위한 동기화 기법)

  • Kim, Yoon Hyun;Lee, Sung Hun;Hwang, Yu Min;Shin, Dong Soo;Rho, Jung Kyu;Kim, Jin Young
    • Journal of Satellite, Information and Communications
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    • v.9 no.3
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    • pp.80-85
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    • 2014
  • In this paper, we propose and analyze a novel synchronization scheme for ubiquitous home network system. In ubiquitous home network system, synchronization method is very important because many consumer electronic devices send the data simultaneously to each other through infrastructure such as access point. We employ digital watermarking sequence to improve synchronization performance without system overhead. The performance of proposed scheme is analyzed in terms of correlation performance. The results of the paper can be applied to design of various applications for ubiquitous home network systems.

Purification and Characterization of a Recombinant Pea Chloroplastic Fructose-1, 6-bisphosphatase

  • Shin, Eun-Hye;Yoo, Yong-Cheol;Lee, Sang-Won;Hahn, Tae-Ryong
    • Journal of Applied Biological Chemistry
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    • v.44 no.4
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    • pp.167-172
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    • 2001
  • A cDNA fragment encoding the chloroplastic fructose-1, 6-bisphosphatase (FBPase) was cloned via PCR from the cDNA library of pea leaves. The cloned cDNA, about 1.05 kbp without signal sequence, was introduced into a pET-28a vector for expression in E. coli strain BL21(DE3)pLysS. The recombinant FBPase was purified through $Ni^+-NTA$ affinity chromatography and characterized. Molecular mass of the monomer was about 42,000. Enzymatic activity of the purified enzyme as the native pea chloroplastic FBPase was the highest at alkaline pH (pH 9.0). The recombinant enzyme was activated by a reducing agent DTT and was insensitive to AMP. The activation energy (Ea) and Arrehenius frequency factor were 42.67 kcal/mol and $2.65{\times}10^{14}/s$, respectively, slightly higher than those of the native enzyme. $K_M$ and $V_{max}$ were $99.98{\mu}M$ and $52.9{\mu}M/min$, respectively, which were comparable with the native enzyme.

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Effects Of Site-mutagenesis of $^{123}Arginine$ residue in $M_1$ Muscarinic Receptor on the Signal Transduction System ($M_1$ Muscarine성 수용체에서 $^{123}Arginine$ 잔기의 Site-mutagenesis가 신호전달계에 미치는 영향)

  • 이석용
    • YAKHAK HOEJI
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    • v.44 no.1
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    • pp.52-59
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    • 2000
  • An exceptionally conserved sequence that is shared among most G protein-coupled neurotransmitter receptors is an aspartate-arginine-tyrosine triplet that is located at the second cytoplasmic domain. Using the ml subtype of muscarinic acetylcholine receptors as an example, a point mutation of the arginine residue at position 123 into asparagine was induced. This mutation resulted in a complete blockade of the carbachol-induced increases of PI hydrolysis and intracellular $Ca^2$$^{+}$ level, in spite of the expression of the wild-type and mutant receptors at similar concentrations in Chinese hamster ovary cells. In marked contrast, the muscarinic agonist carbachol induced concentration-dependent enhancement of the activity of NO synthase at mutant ml receptors although the enhancement was significantly smaller than at wild-type ml receptors. These data suggest that this highly conserved arginine residue plays an important role in coupling of muscarinic receptors to the second messenger systems and the presence of alternate mechanisms of activation of neuronal NO synthase which might be operative in the absence of large changes in the concentration of cellular $Ca^{2+}$.2+/.

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Real-Time Implementation of the Navigation Parameter Extraction from the Aerial Image Sequence (항공영상을 이용한 항법변수 추출 알고리듬의 실시간 구현)

  • 박인준;신상윤;전동욱;김관석;오영석;이민규;김인철;박래홍;이상욱
    • Proceedings of the IEEK Conference
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    • 2000.09a
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    • pp.489-492
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    • 2000
  • 본 논문에서는 영상 항법 변수 추출 알고리듬의 실시간 구현에 관해 연구하였다. 영상 항법 변수 추출 알고리듬은 이전 위치를 기준으로 현재 위치를 추정해내는 상대위치 추정 알고리듬과 상대위치 추정에 의해 누적되는 오차를 보정하기 위한 절대위치 보정 알고리듬으로 구성된다. 절대위치 보정 알고리듬은 고해상도 영상과 IRS (Indian Remote Sensing) 위성영상을 기준영상으로 이용하는 방법 및 DEM (Digital Elevation Model) 을 이용하는 방법으로 구성된다. 하이브리드 영상 항법 변수 추출 알고리듬을 실시간으로 구현하기 위해 MVP (Multimedia Video Processor)로 명명된 TMS320C80 DSP (Digital Signal Processor) 칩을 사용하였다. 구현된 시스템은 MVP의 부동 소수점 프로세서인 MP (Master Processor) 를 고정 소수점 프로세서인 PP (Parallel Processor) 를 제어하거나 삼각함수 계산과 같은 부동 소수점 함수를 계산하는데 사용하였고, 대부분의 연산은 PP를 사용하여 수행하였다. 처리시간이 많이 필요한 모듈에 대해서는 고속 알고리듬을 개발하였고, 4개의 PP를 효율적으로 사용하기 위한 영상분할 방법에 대해 제안하였다. 비행체에서 캡코더를 이용해 촬영한 연속 항공 영상과 비행체의 자세정보를 입력으로 실시간 시뮬레이션 하였다. 실험결과는 하이브리드 항법 변수 추출 알고리듬의 실시간 구현이 효과적으로 구현되었음을 나타내고 있다.

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The phosphoinositide-specific phospholipase C gene, MPLCl, of Magnaporthe grisea is required for fungal development and plant colonization

  • Park, Hee-Sool;Lee, Yong-Hwan
    • Proceedings of the Korean Society of Plant Pathology Conference
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    • 2003.10a
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    • pp.84.1-84
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    • 2003
  • Magnaporthe grisea, the casual agent of rice blast, forms an appressorium to penetrate its host. Much has been learned about environmental cues and signal transduction pathways, especially those involving CAMP and MAP kinases, on appressorium formation during the last decade. More recently, pharmacological data suggest that calcium/calmodulin-dependent signaling system is involved in its appressorium formation. To determine the role of phosphoinositide-specific phospholipase C (PI-PLC) on appressorium formation, a gene (WPLCl) encoding PI-PLC was cloned and characterized from M. grisea strain 70-15. Sequence analysis showed that MPLCl has alt five conserved domains present in other phospholipase C genes from several filamentous fungi and mammals. Null mutants (mplcl) generated by targeted gene disruption exhibited pleiotropic effects on conidial morphology, appressorium formation, fertility and pathogenicity. mplcl mutants developed nonfunctional appressoria and are also defective in infectious growth in host tissues. Defects in appressorium formation and pathogenicity in mplcl mutants were complemented by a mouse PLCdelta-1 cDNA under the control of the MPLCl promoter. These results suggest that cellular signaling mediated by MPLCl plays crucial and diverse roles in development and pathogenicity of M. grisea, and functional conservation between fungal and mammalian Pl-PLCs.

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Purification and Characterization of an Insect Antibacterial Peptide, Defensin, Expressed in Saccharomyces cerevisiae (Saccharomyces cerevisiae에서 발현한 곤충 항균펩티드, defensin의 정제 및 특성 조사)

  • 강대욱;이준원;김보연;안종석
    • Journal of Life Science
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    • v.12 no.4
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    • pp.483-489
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    • 2002
  • We investigated the biochemical properties of insect defensin expressed and secreted from Saccharomyces corevisiae. The defensin showed extremely high resistance to boiling for up to 30 min and to pH values tested from 2.0 to 12.0. The treatment of defensin with various proteases abolished antibacterial activity. However, amylases, cellulase, lipase and catalase had no effect on the activity. The defensin was purified to homogeneity through ammonium sulfate concentration of culture supernatant, SP-Sepharose column chromatography and RP-HPLC. Tricin-SDS-PAGE analysis revealed that the molecular weight of the defensin was about 4.0 kDa. The antibacterial activity of the purified defensin was verified by renaturation of stained gel and gel pouring assay using Micrococcus luteus as a test organism.

Quantitative Screening of Insect Cell Transformants Stably Expressing $GFP_{uv}-{\beta}1$, 3-N-acetylglucosaminyltransferase 2 Fusion Protein

  • Deo Vipin Kumar;Kato Tatsuya;Asari Naoko;Park Enoch Y.
    • Biotechnology and Bioprocess Engineering:BBE
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    • v.10 no.3
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    • pp.275-279
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    • 2005
  • Insect cell transformants, stably expressing human $GFP_{uv}-{\beta}1$, 3-N-acetylglucosaminyltransferase 2 $({\beta}3GnT2)$ as the green fluorescent protein $(GFP_{uv})-fused$ protein, were efficiently isolated on Western blot by the quantification of the densitometric intensity of the fusion protein. From almost 150 transformants containing the fusion gene linked to three different types of signal sequence, two transformants, Tn-pXme4a and -pX28a, were successfully selected, showing 8.3 and 8.6 mU/mL ${\beta}3GnT$ activity, respectively. This method requires a screening time almost one-half that required in the isolation of stably transformed cells with high expression levels, and at the same time allows the handling a large number of transformants.

Expression of EuNOD-ARP1 Encoding Auxin-repressed Protein Homolog Is Upregulated by Auxin and Localized to the Fixation Zone in Root Nodules of Elaeagnus umbellata

  • Kim, Ho Bang;Lee, Hyoungseok;Oh, Chang Jae;Lee, Nam Houn;An, Chung Sun
    • Molecules and Cells
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    • v.23 no.1
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    • pp.115-121
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    • 2007
  • Root nodule formation is controlled by plant hormones such as auxin. Auxin-repressed protein (ARP) genes have been identified in various plant species but their functions are not clear. We have isolated a full-length cDNA clone (EuNOD-ARP1) showing high sequence homology to previously identified ARP genes from root nodules of Elaeagnus umbellata. Genomic Southern hybridization showed that there are at least four ARP-related genes in the genome of E. umbellata. The cDNA clone encodes a polypeptide of 120 amino acid residues with no signal peptide or organelle-targeting signals, indicating that it is a cytosolic protein. Its cytosolic location was confirmed using Arabidopsis protoplasts expressing a EuNOD-ARP1:smGFP fusion protein. Northern hybridization showed that EuNOD-ARP1 expression was higher in root nodules than in leaves or uninoculated roots. Unlike the ARP genes of strawberry and black locust, which are negatively regulated by exogenous auxin, EuNOD-ARP1 expression is induced by auxin in leaf tissue of E. umbellata. In situ hybridization revealed that EuNOD-ARP1 is mainly expressed in the fixation zone of root nodules.

Cloning and Expression Analysis of Gonadogenesis-associated Gene SPATA4 from Rainbow Trout (Oncorhynchus mykiss)

  • Liu, Bowen;Liu, Shangfeng;He, Shan;Zhao, Ying;Hu, Hongxia;Wang, Zhao
    • BMB Reports
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    • v.38 no.2
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    • pp.206-210
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    • 2005
  • Gonadogenesis is a complicated process which involves multi-gene interactions. A rainbow trout (Oncorhynchus mykiss) gene spermatogenesis associated 4 (SPATA4) was cloned and characterized from adult rainbow trout testis. The cDNA sequence of rainbow trout SPATA4 contains an open reading frame of 1, 081 nucleatides encoding a putative protein of 259 amino acids. The putative protein from rainbow trout shares a 76.8% homology with zebrafish SPATA4. No trans-membrane regions or signal peptide were detected using bioinformatics methods. Subcellular localization analysis revealed that rainbow trout SPATA4 was a nuclear protein with highest possibility (39.1%). Multi-tissue reverse transcriptase PCR (RT-PCR) was performed to examine the distribution of rainbow trout SPATA4 in eleven organs of adult rainbow trout. The result demonstrated that this gene express specifically in testis and slight amount of expression was detected in ovary. Further analysis of SPATA4 characterization and function in rainbow trout may provide insight into the understanding of gonadogenesis process.

Molecular Cloning and Expression of a cDNA Encoding Putative Chemosensory Protein from the Mole Cricket, Gryllotalpa orientalis

  • Kim, Iksoo;Lee, Kwang-Sik;Ryu, Kang-Sun;Kim, Jin-Woo;Ahn, Mi-Young;Lee, Heui-Sam;Sohn, Hung-Dea;Jin, Byung-Rae
    • International Journal of Industrial Entomology and Biomaterials
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    • v.6 no.1
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    • pp.87-92
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    • 2003
  • We describe here the cloning, expression and characterization of a cDNA encoding a putative chemosensory protein (CSP) from the mole cricket, Gryllotalpa orientalis. The G. orientalis chemosensory protein cDNA sequences comprised of 384 bp with 128 amino acid residues. The G. orientalis chemosensory protein showed 75.4% protein sequence identity to the Locusta migratoria CSP, Northern blot analysis revealed that signal was stronger in head than leg and cuticle, indicating that the head part containing antennae is a main site for G. orientalis chemosensory protein synthesis. The cDNA encoding G. orientalis chemosensory protein was expressed as approximately 12 kDa polypeptide in baculovirus-infected insect cells.