• 제목/요약/키워드: protein polymers

검색결과 75건 처리시간 0.027초

Using Harmonic Analysis and Optimization to Study Macromolecular Dynamics

  • Kim Moon-K.;Jang Yun-Ho;Jeong Jay-I.
    • International Journal of Control, Automation, and Systems
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    • 제4권3호
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    • pp.382-393
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    • 2006
  • Mechanical system dynamics plays an important role in the area of computational structural biology. Elastic network models (ENMs) for macromolecules (e.g., polymers, proteins, and nucleic acids such as DNA and RNA) have been developed to understand the relationship between their structure and biological function. For example. a protein, which is basically a folded polypeptide chain, can be simply modeled as a mass-spring system from the mechanical viewpoint. Since the conformational flexibility of a protein is dominantly subject to its chemical bond interactions (e.g., covalent bonds, salt bridges, and hydrogen bonds), these constraints can be modeled as linear spring connections between spatially proximal representatives in a variety of coarse-grained ENMs. Coarse-graining approaches enable one to simulate harmonic and anharmonic motions of large macromolecules in a PC, while all-atom based molecular dynamics (MD) simulation has been conventionally performed with an aid of supercomputer. A harmonic analysis of a macroscopic mechanical system, called normal mode analysis, has been adopted to analyze thermal fluctuations of a microscopic biological system around its equilibrium state. Furthermore, a structure-based system optimization, called elastic network interpolation, has been developed to predict nonlinear transition (or folding) pathways between two different functional states of a same macromolecule. The good agreement of simulation and experiment allows the employment of coarse-grained ENMs as a versatile tool for the study of macromolecular dynamics.

파상풍 톡소이드를 함유한 생체분해성 미립구의 특성 (Characteristics of Tetanus Toxoid Loaded in Biodegradable Microparticles)

  • 김지윤;김수남;백선영;이명숙;민홍기;홍성화
    • 약학회지
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    • 제44권4호
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    • pp.293-299
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    • 2000
  • Biodegradable microspheres made from poly-lactide-co-glycolide polymers have been considered as a new delivery system for single-dose vaccine. Purified tetanus toxoid (TT) was encapsulated in poly-lactide(PLA) and poly-lactide-co-glycolide (PLGA) microparticles using a solvent evaporation method in a multiple emulsion system (water-in oil-in water). The morphology of 77-loaded microparticles was spherical and the suface of them was smooth. The particle size was in a range of 2-10. Protein loading efficiency was 68-97.8%. PLGA (85:15) microparticle showed the highest efficiency. Protein release pattern was influenced by polymer molecular weight and composition. The release rate of PLA(Mw 100,000) microsphere was higher than any other microspheres. In consequence of the hydrolysis of PLGA(50:50) microspheres, environmental pH decreased from 7.4 to 5.0. The PLA, PLGA (75:25) and PLGA (85:15) microshperes showed no significant pH change. The antigenicity or n in microshperes was assayed by indirect sandwich ELISA using equine polyclonal tetanus antitoxin for capture antibody and human polyclonal tetanus antitoxin for primary antibody. The antigenicity of TT in PLA (Mw 100,000), PLGA(50:50, Mw 100,000) and PLGA (75:25, Mw 73,300) after 30 days incubation showed 54, 40.9 and 76.7%, respectively.

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미생물성 Transglutaminase에 의한 유채단백질의 겔화 (Gelation of Rapeseed Protein Induced with Microbial Transglutaminase)

  • 현은희;강영주
    • 한국식품과학회지
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    • 제31권5호
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    • pp.1262-1267
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    • 1999
  • 겔 형성이 어려운 유채단백질의 겔화를 위하여 미생물성 TGase의 촉매작용에 의하여 최적 겔화 반응조건을 겔강도(g)와 겔변형(mm)을 조사하여 검토하였다. 또한 형성된 겔의 고분자화를 SDS-PAGE 및 GL교차결합 함량 측정에 의하여 확인하였다. 단백질-TGase반응에서 효소 첨가량은 $45^{\circ}C$에서 60분 동안 반응 시 단백질농도가 10%에서 효소가 1 : 40([E] : [S])의 비로 첨가되었을 때 겔강도와 변형 값이 가장 높았다. 또한 이 조건에서 기질단백질 농도가 $4{\sim}l2%$로 증가함에 따라 겔강도는 비례적으로 증가함을 보였으나 겔의 변형을 고려할 때 10% 농도가 유채단백질 겔 제조에 적당한 농도로 조사되었다. 최적 활성을 나타내는 반응온도는 $45^{\circ}C$로 관찰되었고, 반응시간은 90분이면 적당한 것으로 조사되었다. 겔강도와 변형은 다른 pH와 비교할 때 pH 7에서 상당히 높은 값을 보여 pH 7이 최적조건이었다. SDS-PAGE분석에서 효소반응 에 따라 유채단백질의 본래 밴드들이 소별되거나 희미해지면서 고분자 밴드들이 형성되고 있음을 보여주었다. 또만 HPLC 분석 결과 GL교차결합 함량이 반응시간에 따라 $0\;{\mu}mol/g$에서 최고 $7.14\;{\mu}mol/g$ gel(반응 90분)까지 증가되고 있어 유채단백질의 겔화가 TGase에 의해 이루어지고 있다는 것을 확인할 수 있었다.

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Increased production of human granulocyte-macrophage colony stimulating factor (hGM -CSF) by the addition of stabilizing polymer in plant suspension cultures

  • 김난선;이재화;김영숙;권태호;양문식
    • 한국생물공학회:학술대회논문집
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    • 한국생물공학회 2001년도 추계학술발표대회
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    • pp.95-98
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    • 2001
  • The effect of stabilizing polymer on hGM-CSF production was investigated in suspension cell cultures of transgenic tobacco. Secreted human GM -CSF from cell suspension cultures was detected in the medium at a maximum concentration of 180 ${\mu}g/L$ by ELISA. However, the secreted hGM -CSF was unstable in the medium, and rapidly degraded after day 5. In order to stabilize the secreted hGM-CSF, three stabilizing polymers were tested, polyethylene glycol, polyvinylpyrrolidone and gelatin. Gelatin was the most effective in stabilizing the secreted GM-CSF. Following the addition of 5% (w/v) gelatin, the maximum GM -CSF concentration reached 783 ${\mu}g/L$, a 4.6-fold increase over control.

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Copying and Manipulating Nature: Innovation for Textile Materials

  • Rossbach, Volker;Patanathabutr, Pajaera;Wichitwechkarn, Jesdawan
    • Fibers and Polymers
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    • 제4권1호
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    • pp.8-14
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    • 2003
  • This paper considers the potential impact of biological approaches such as bio-copying (biomimetics) and biomanipulating (e.g. genetic engineering) on future developments in the field of textiles and, in particular, fibres. If analytical tools for studying biological systems combined with those of materials science are further developed, and higher efficiency and reproducibility of genetic engineering technology can be achieved, the potential for the copying and manipulation of nature for textile innovations will be immense. The present state for both fields is described with examples such as touch and close fastener, structurally coloured fibres, the Lotus of lect (for bio-copying), as well as herbicide tolerant cotton, insecticide resistant cotton (Bt cotton), cotton polyester bicomponent fibres, genetically engineered silkworm and silk protein, and spider fibres. (for genetic engineering).

Poly(vinyl alcohol)/Milk Casein Blend Fiber의 제조와 물성 (A Study on the Properties of Poly(vinyl alcohol)/Milk Casein Blend Fibers)

  • Kim, Kyung-Sook;Jeong, Young-Jin;Kim, Han-Do
    • 한국섬유공학회:학술대회논문집
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    • 한국섬유공학회 2003년도 가을 학술발표회 논문집
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    • pp.27-30
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    • 2003
  • Casein, a milk protein is used in food, paper, leather and textile industries. The milk casein fiber was developed 1935 first. The strong point of milk casein fiber, the contraction is fewer the wool when washing and damage of harmful insect is smaller than wool.[1] But proteins are the major category of natural polymers that are difficult to be processed into fibrous forms. This is because of their complex macromolecular and three-dimensional structures as well as strong inter- and / or intra molecular forces.[2] (omitted)

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Specific Binding of Streptavidin onto the Nonbiofouling Titanium/Titanium Oxide Surface through Surface-Initiated, Atom Transfer Radical Polymerization and Bioconjugation of Biotin

  • Kang, Sung-Min;Lee, Bong-Soo;Kim, Wan-Joong;Choi, In-Sung S.;Kil, Mun-Jae;Jung, Hyuk-Jun;Oh, Eu-Gene
    • Macromolecular Research
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    • 제17권3호
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    • pp.174-180
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    • 2009
  • Chemical modification of titanium/titanium oxide (Ti/$TiO_2$) substrates has recently gained a great deal of attention because of the applications of Ti/$TiO_2$-based materials to biomedical areas. The reported modification methods generally involve passive coating of Ti/$TiO_2$ substrates with protein-resistant materials, and poly(ethylene glycol) (PEG) has proven advantageous for bestowing a nonbiofouling property on the surface of Ti/$TiO_2$. However, the wider applications of Ti/$TiO_2$ based materials to biomedical areas will require the introduction of biologically active moieties onto Ti/$TiO_2$, in addition to nonbiofouling property. In this work, we therefore utilized surface-initiated polymerization to coat the Ti/$TiO_2$ substrates with polymers presenting the nonbiofouling PEG moiety and subsequently conjugated biologically active compounds to the PEG-presenting, polymeric films. Specifically, a Ti/$TiO_2$ surface was chemically modified to present an initiator for atom transfer radical polymerization, and poly(ethylene glycol) methacrylate (pEGMA) was polymerized from the surface. After activation of hydroxyl groups of poly(pEGMA) (pPEGMA) with N,N'-disuccinimidyl carbonate, biotin, a model compound, was conjugated to the pPEGMA films. The reactions were confirmed by infrared spectroscopy, X-ray photoelectron spectroscopy, contact angle goniometry, and ellipsometry. The biospecific binding of target proteins was also utilized to generate micropatterns of proteins on the Ti/$TiO_2$ surface.

Poly(L-lysine) Based Semi-interpenetrating Polymer Network as pH-responsive Hydrogel for Controlled Release of a Model Protein Drug Streptokinase

  • Park, Yoon-Jeong;Jin Chang;Chen, Pen-Chung;Victor Chi-Min Yang
    • Biotechnology and Bioprocess Engineering:BBE
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    • 제6권5호
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    • pp.326-331
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    • 2001
  • With the aim of developing of pH-sensitive controlled drug release system, a poly(Llysine) (PLL) based cationic semi-interpenetrating polymer network (semi-IPN) has been synthesized. This cationic hydrogel was designed to swell at lower pH and de-swell at higher pH and therefore be applicable for achieving regulated drug release at a specific pH range. In addition to the pH sensitivity, this hydrogel was anticipated to interact with an ionic drug, providing another means to regulate the release rate of ionic drugs. This semi-IPN hydrogel was prepared using a free-radical polymerization method and by crosslinking of the polyethylene glycol (PEG)-methacrylate polymer through the PLL network. The two polymers were penetrated with each other via interpolymer complexation to yield the semi-IPN structures. The PLL hydrogel thus prepared showed dynamic swelling/de-swelling behavior in response to pH change, and such a behavior was influenced by both the concentrations of PLL and PEG-methacrylate. Drug release from this semi-IPN hydrogel was also investigated using a model protein drug, streptokinase. Streptokinase release was found to be dependent on its ionic interaction with the PLL backbones as well as on the swelling of the semi-IPN hydrogel. These results suggest that a PLL semi-IPN hydrogel could potentially be used as a drug delivery platform to modulate drug release by pH-sensitivity and ionic interaction.

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유청단백질을 이용한 미세캡슐의 응용 (Water-insoluble, Whey Protein-based Microcapsules for Controlled Core Release Application)

  • 이성제
    • 한국유가공학회:학술대회논문집
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    • 한국유가공기술과학회 2005년도 창립 30주년 기념 국제심포지움 - 웰빙시대의 우유.유제품의 새로운 발견
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    • pp.37-61
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    • 2005
  • 미세캡슐 (microencapsulation)은 내부 물질(core material)의 방출을 제어하기 위하여 여러 천연 및 생분해성 물질이 사용된다. 유청단백질은 이러한 목적에 아주 적합한 것으로 여겨지고 있는데 이는 독특한 이화학적 특성에 기인되는 것이다. 본 연구팀은 drug이나 생리활성물질을 피복하기 위하여 cross-linking 물질로 glutaraldehyde를 사용하여 수용성 이면서 유청단백질을 근간으로 하는 미세캡슐 제조기술을 개발하였다. 또한 생리적 조건에서 이들 캡슐의 분해 및 포집물질의 방출에 대한 연구를 수행하였는데 수용성 drug으로 사용된 theophylline은 유청단백질에 잘 분산되는 것으로 확인되었다. 이 분산액은 !%의 생리활성물질인 polyurethane을 함유하는 dichloromethane과 hexane 혼합불에 잘 확산이 되었다. 미세캡슐공정에서 피복물질로 사용되는 여러 물질중에서 유청단백질은 생리적 효능이 뛰어나고 여러 물리적 작용이 있기 때문에 새로운 피복소재로써 그 효용성이 매우 높다. 지금까지의 연구결과 유청단백질을 이용한 미세캡슐의 제조는 유청단백질이 가지는 기능적 효과와 내부물질이 지니는 약리효과를 동시에 이용할 수 있다는 점에서 향후 고부가 식품 의약품 첨가물질로써 유용성이 기대된다고 하겠다.

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Fucus evanescens fucoidan의 matrix metalloproteinase-1 promoter, mRNA, 단백질 발현과 신호전달경로에 미치는 효과 (Effect of Fucus evanescens Fucoidan on Expression of Matrix Metalloproteinase-1 Promoter, mRNA, Protein and Signal Pathway)

  • 구미정;정지원;이명숙;조병규;이순례;이혜숙;;;;이용환
    • 생명과학회지
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    • 제20권11호
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    • pp.1603-1610
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    • 2010
  • Fucoidan은 갈조류의 세포벽에 존재하는 황산화 다당류이다. 본 연구에서는 자외선 B를 인체각질형성세포에 조사하여 matrix metalloproteinase-1 (MMP-1)을 발현 시킨 후 Fucus evanescens fucoidan이 MMP-1 promoter, mRNA, 단백 발현과 mitogen-activated protein kinases (MAPKs)의 인산화에 미치는 영향을 확인하고자 하였다. 자외선 B에 의해 생성된 MMP-1의 promoter activity와 mRNA, 단백 발현은 fucoidan $10\;{\mu}g/ml$$100\;{\mu}g/ml$를 투여하였을 때 fucoidan을 투여하지 않고 자외선만 조사한 군에 비하여 유의하게 억제되었다. 그리고 F. evanescens fucoidan은 extracellular signal regulated kinase (ERK)의 활성은 현저히 억제시켰으나 c-JUN N-terminal kinase (JNK)와 p38의 활성에 미치는 영향은 약하였다. 따라서 이 연구결과들은 F. evanescens fucoidan이 피부 광노화의 예방과 치료에 도움이 될 가능성을 확인할 수 있었다.