• Title/Summary/Keyword: protein association

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EFFECTS OF BLOOD-MIXED AND HEAT TREATMENT OF PROTEIN FEEDS ON NITROGEN DIGESTION IN THE RUMEN AND HINDGUT OF SHEEP

  • Yoon, C.S.;Lee, N.H.;Jung, K.K.
    • Asian-Australasian Journal of Animal Sciences
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    • v.3 no.1
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    • pp.39-46
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    • 1990
  • This experiment was conducted to study the effects of blood-mixed and heat-treated protein feeds on protein degradation in the rumen, flow of protein to the abomasums and availability of undegraded protein in the intestine of sheep in a $4{\times}4$ Latin square design. Soybean oil meal, rapeseed meal, and whole soybean were mixed with fresh swine blood and dried at $140^{\circ}C$ for 2 h. Proportionate disappearance of apparently digested OM in the postrumen for the blood and heat treated protein group was ranged from 43.2 to 50.5% as compared with 28.0% for the unheated soybean oil meal diet. The treated protein supplements were resulted in greater total N and NAN flow passing at the abomasums than untreated soybean oil meal diet was fed. The quantities of undegraded feed N passing at the abomasums for the treated protein diets was approximately twice as high as that of the untreated soybean oil meal diet and the estimated amount of undegraded N of the protein supplement itself was 79.1 to 84.2% as compared with 15% of soybean oil meal.

Association of UDP-galactose-4-epimerase with milk protein concentration in the Chinese Holstein population

  • Li, Cong;Cai, Wentao;Liu, Shuli;Zhou, Chenghao;Cao, Mingyue;Yin, Hongwei;Sun, Dongxiao;Zhang, Shengli;Loor, Juan J.
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.11
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    • pp.1725-1731
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    • 2020
  • Objective: An initial RNA-Sequencing study revealed that UDP-galactose-4-epimerase (GALE) was one of the most promising candidates for milk protein concentration in Chinese Holstein cattle. This enzyme catalyzes the interconversion of UDP-galactose and UDP-glucose, an important step in galactose catabolism. To further validate the genetic effect of GALE on milk protein traits, genetic variations were identified, and genotypes-phenotypes associations were performed. Methods: The entire coding region and the 5'-regulatory region (5'-UTR) of GALE were re-sequenced using pooled DNA of 17 unrelated sires. Association studies for five milk production traits were performed using a mixed linear animal model with a population encompassing 1,027 Chinese Holstein cows. Results: A total of three variants in GALE were identified, including two novel variants (g.2114 A>G and g.2037 G>A) in the 5'-UTR and one previously reported variant (g.3836 G>C) in an intron. All three single nucleotide polymorphisms (SNPs) were associated with milk yield (p<0.0001), fat yield (p = 0.0006 to <0.0001), protein yield (p = 0.0232 to <0.0001) and protein percentage (p<0.0001), while no significant associations were detected between the SNPs and fat percentage. A strong linkage disequilibrium (D' = 0.96 to 1.00) was observed among all three SNPs, and a 5 Kb haplotype block involving three main haplotypes with GAG, AGC, and AGG was formed. The results of haplotype association analyses were consistent with the results of single locus association analysis (p<0.0001). The phenotypic variance ratio above 3.00% was observed for milk protein yield that was explained by SNP-g.3836G >C. Conclusion: Overall, our findings provided new insights into the polymorphic variations in bovine GALE gene and their associations with milk protein concentration. The data indicate their potential uses for marker-assisted breeding or genetic selection schemes.

Discovering Sequence Association Rules for Protein Structure Prediction (단백질 구조 예측을 위한 서열 연관 규칙 탐사)

  • Kim, Jeong-Ja;Lee, Do-Heon;Baek, Yun-Ju
    • The KIPS Transactions:PartD
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    • v.8D no.5
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    • pp.553-560
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    • 2001
  • Bioinformatics is a discipline to support biological experiment projects by storing, managing data arising from genome research. In can also lead the experimental design for genome function prediction and regulation. Among various approaches of the genome research, the proteomics have been drawing increasing attention since it deals with the final product of genomes, i.e., proteins, directly. This paper proposes a data mining technique to predict the structural characteristics of a given protein group, one of dominant factors of the functions of them. After explains associations among amino acid subsequences in the primary structures of proteins, which can provide important clues for determining secondary or tertiary structures of them, it defines a sequence association rule to represent the inter-subsequences. It also provides support and confidence measures, newly designed to evaluate the usefulness of sequence association rules, After is proposes a method to discover useful sequence association rules from a given protein group, it evaluates the performance of the proposed method with protein sequence data from the SWISS-PROT protein database.

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Chemistry and Biology of Ras Farnesyltransferase

  • Cho, Kwang-Nym;Lee, Kee-In
    • Archives of Pharmacal Research
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    • v.25 no.6
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    • pp.759-769
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    • 2002
  • Mutated forms of ras are found in many human tumors and the rate of incidence is significantly higher in colon and pancreatic cancers. The protein product from the ras oncogene is a small G-protein, $p21^{ras}{\;}(Ras)$ that is known to playa key role in the signal transduction cascade and cell differentiation and proliferation. Mutated Ras is unable to regulate itself and remains constantly activated, leading to uncontrolled cell growth. The function of Ras in signal transduction requires its location near the growth factor receptor at the cell membrane. However, Ras does not have a transmembrane domain. Ras requires farnesylation to increase its hydrophobicity and subsequent plasma membrane association for its transforming activity. This key post-translational modification is catalyzed by the enzyme Ras farnesyltransferase (FTase), which transfers a farnesyl group from farnesylpyrophosphate to the C-terminal cysteine of the Ras protein. The requirement has focused attention on FTase as a target for therapeutic intervention. Selective inhibition of FTase will prevent Ras protein from association with the plasma membrane, leading to a disruption of oncogenic Ras function.

Selection of plasmodium falciparum (Pf) malaria specific diagnosis target proteins based on bioinformatics (생명정보학 기반 열대열 말라리아 특이 진단 타깃 단백질 선정)

  • Seo, Seung Hwan;Kim, Hak Yong
    • Proceedings of the Korea Contents Association Conference
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    • 2014.11a
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    • pp.61-62
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    • 2014
  • 말라리아는 인체에 감염되는 열원충의 종류에 따라 크게 열대열 원충, 삼일열 원충, 사일열 원충, 난형열 원충으로 구분된다. 말라리아는 감염 후 치료시기를 놓칠 경우 사망에 이를 수 있는 위험한 질병이므로 초기 진단을 위한 Rapid Diagnostic Test(RDT) 키트가 중요하다. 기존의 진단키트의 경우, 열대열 말라리아와 삼일열 말라리아를 동시에 검출하여 치료법이 다름에도 불구하고 구분하여 진단하기가 어렵다. 이러한 이유로 본 연구에서는 열대열 말라리아에 특이적인 RDT키트 개발을 위해, PlasmoDB에서 열대열 말라리아 항원 단백질을 얻고 BLAST를 이용하여 열대열 말라리아에 특이적인 항원 단백질 후보군을 얻었다. 이후 감염단계에 따라 우선순위를 정하고 SPpred에서 제공하는 protein solubility prediction을 통해 실험적으로 단백질 발현 가능 여부를 확인한 결과, 최종적으로 histidine-rich protein II, histidine-rich protein III, glycophorin binding protein를 선정하였다. 이들 단백질을 이용한 열대열 말라리아 진단키트 제작은 열대열 말라리아 특이적 진단을 효과적으로 할 수 있다.

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The Effect of Protein and Carbohydrate on the Recovery Rate of Restricted Rats (탄수화물 및 단백질이 식이 제한을 받은 흰쥐의 회복에 미치는 영향)

  • 신동순
    • Journal of the Korean Home Economics Association
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    • v.19 no.2
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    • pp.175-182
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    • 1981
  • This study was designed to compare the effect of protein with that of calorie, both of which were supplemented by separate feeding, on the recovery rate and metabolic change of undernourished rats. During the two weeks of food restriction, the weight of body and some major internal organs was reduced, compared with normal growing rats, but the extent of reduction was various. After that, recovery food was supplemented for two weeks. The amount of body nitrogen retention and its -percentage were lower in unsupplemented and sugar supplemented groups. Among the supplemented groups, its amount was increased according as the protein intake was higher, while its percentage was decreased. Body and internal organs weight change showed a similar tendency. Interrelation between calorie intake and body fat retention (liver fat content and epididymal fat pad weight) was not found regularly. Consequently, the recovery rate from restriction was higher in protein supplemented group than calorie supplemented group. But no significant difference could be found between the groups.

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Coating Immobilization Using Soy Protein Polymers: Technical Concepts and Importance to Quality

  • Hiscock, Donald F.;Merrifield, Thomas B.
    • Journal of Korea Technical Association of The Pulp and Paper Industry
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    • v.32 no.5
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    • pp.60-66
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    • 2000
  • Coating immobilization is the process by which the wet coating applied to paper or paperboard reaches the final form. A coating immobilization point is defined as the solids content reached during drying where no further redistribution of coating materials occurs. Good control of coating immobilization is important in producing coated paper and paperboard with consistent high quality. This paper discusses the technical concepts of how coatings immobilize, and describes the importance of good immobilization control on coating holdout and coating structure. The use of soy protein polymers to modify the coating immobilization point is discussed. Soy proteins, because of their interaction with coating pigments, make a significant contribution to the immobilization characteristics of coastings. This technology gives the formulator options for changing the immobilization point to improve the performance of the coating. The importance of immobilization on casting uniformity, microporosity and sheet qualities is discussed, including binder migration, mottle, gluing, and print quality.

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Effects of Isoleucine Supplementation of a Low Protein, Corn-Soybean Meal Diet on the Performance and Immune Function of Weanling Pigs

  • Zheng, C.T.;Li, D.F.;Qiao, S.Y.;Gong, L.M.;Zhang, D.F.;Thacker, P.;Han, In K.
    • Asian-Australasian Journal of Animal Sciences
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    • v.14 no.1
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    • pp.70-76
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    • 2001
  • This experiment was conducted to investigate the effects of crystalline isoleucine supplementation of a low protein, corn-soybean meal diet on the performance and immune function of weanling pigs. Forty-five crossbred ($Duroc{\times}Landrace{\times}Large\;White$) piglets, weighing an average of $11.00{\pm}0.07kg$, were assigned to either a control diet containing 20% crude protein (0.64% isoleucine), a 16% crude protein diet without isoleucine supplementation (0.41% isoleucine) or a 16% crude protein diet supplemented with isoleucine (0.64% isoleucine). Reducing the crude protein content of the diet from 20 to 16% significantly (p<0.05) reduced both average daily gain and feed intake. Feed conversion also tended (p=0.07) to be poorer for a low protein diet without isoleucine supplementation. Isoleucine supplementation of the 16% crude protein diet increased both gain and feed intake to a level similar to that obtained by pigs fed the 20% crude protein diet (p>0.05). Blood urea nitrogen, serum total protein and serum globulin were significantly (p<0.05) higher for pigs fed the unsupplemented 16% crude protein diet than for pigs fed the isoleucine-supplemented diet or the control. Egg albumin antibody titre decreased significantly (p<0.05) in pigs fed the diet with isoleucine supplementation, whereas the antibody titre of pigs fed the low protein and low isoleucine diet was similar to that of pigs fed the diet containing 20% crude protein and 0.64% isoleucine. It was suggested that crystalline isoleucine supplementation of a low protein and low isoleucine diet improved pig performance but suppressed humoral immune function.