• Journal of KIISE
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• v.43 no.9
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• pp.974-982
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• 2016

Mutation analysis (or software mutation analysis) generates variants of a target program by injecting systematic code changes to the target program, and utilizes the variants to analyze the target program behaviors. Effective mutation analyses require adequate mutation operators that generate diverse variants for use in the analysis. However, the current mutation analysis tools for Java programs have limitations, since they support only limited types of mutation operators and do not support recent language features such as Java8. In this study, we present Mutagen4J, a new mutant generation tool for Java programs. Mutagen4J additionally supports mutation operators recently shown to generate various mutants and fully supports recent Java language features. The experimental results show that Mutagen4J generates useful mutants for analyses 2.3 times more than the existing Java mutation tools used for the study.

• Childhood Kidney Diseases
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• v.24 no.2
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• pp.131-137
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• 2020

Nephrogenic diabetes insipidus (DI) is a rare disease in which the patient cannot concentrate urine despite appropriate or high secretion of antidiuretic hormone. Congenital nephrogenic DI is caused by the arginine vasopressin receptor 2 (AVPR2) or aquaporin 2 (AQP2) gene mutation; the AVPR2 genetic mutation accounts for 90% of the cases. National health screening for infants and children was launched in 2007 in order to prevent accidents and promote public health in infants and children in Korea. The program has been widely used as a primary clinical service in Korea. We treated an infant with faltering growth and delayed development detected by the National health screening program, and diagnosed the problem as nephrogenic DI caused by a rare missense mutation of c.490T>C on the AVPR2 gene. This case can be a good educational nephrogenic DI with a rare AVPR2 mutation, which was well screened and traced by the national health screening program for infants and children in Korea.

• Nutritional Sciences
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• v.5 no.1
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• pp.13-19
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• 2002

A mutation in the promoter region of uncoupling protein 3 (UCF3), specifically the -55C longrightarrow T transition, may influence an individual's energy metabolism and body weight. The objective of this study was to investigate the effect of a weight reduction program on endocrine functions and body fat distribution, related to UCP3 promoter genotype. Ninety overweight pre-menopausal female subjects participated in the weight reduction program at Yonsei University Hospital, and were placed on a calorie-restricted diet (300 kcal less than their daily requirements) for 12 weeks. After 12 weeks, all subjects on the program lost approximately 5% of their initial body weights and had lower Body Mass Index (BMI) values. Among the 90 women, 56 had a normal (without mutation) UCP3 genotype, while 34 women had mutations in the promoter region of UCP3. Despite similar weight reductions in both groups, a significantly higher decrease in abdominal adipose tissue was observed in the normal UCP3 genotype group, compared to the group with mutations. In particular, there was a significant reduction of fat at the lumbar 1 (Ll) level in the without-mutation group. Serum levels of total cholesterol, apolipoprotein Al were significantly decreased in the without-mutation group, by 4.4% and 5.7% respectively. Serum levels of hormones were not significantly changed in both groups artier the intervention. However, in the group without the mutations, the leptin level significantly reduced by 23.4% (p<0.001). Serum free fatty acid (FFA) concentration was significantly increased in the group with mutation following the weight reduction program. On the other hand, FFA responses were shown similar increases in both groups. In conclusion, although no difference was found in the magnitude of weight reduction in both groups, there were significant differences in body fat distribution and in endocrine function between the groups.

• The KIPS Transactions:PartD
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• v.16D no.4
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• pp.517-526
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• 2009

It is possible to indicate the complex design and execution of object-oriented program with dynamic UML diagram. This paper shows the way how to make several test cases from sequence, state, and activity diagram among dynamic UML diagram. Three dynamic UML diagrams about withdrawal work of ATM simulation program are drawn. Then different test cases are created from these diagrams using previously described ways. To evaluate effectiveness of test cases, mutation testing is executed. Mutants are made from MuClipse plug-in tool based on Eclipse which supports many traditional and class mutation operators. Finally we've got the result of mutation testing and compare effectiveness of test cases, etc. Through this document, we've known some hints that how to choose the way of making test cases.

• Journal of Korean Medicine for Obesity Research
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• v.2 no.1
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• pp.43-52
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• 2002

Purpose & Methods: In order to study obese gene mutation rate in obese Korean patients and to investigate the effect at Chegamuiyiin-tang and electro-lipolysis-acupuncture on obesity treatment. the difference of the reaction to herbal dieting between patients with ${\beta}3$ adrenergic receptor mutation and the patients with wild type ${\beta}3$ adrenergic receptor is observed. Results: Chegamuiyiin-tang and electro-lipolysis-acupuncture treatment are effective on the treatment of obesity in weight reduction. body fat reduction and the circumferences of arm, abdomen, hip and thigh. In the comparison of ${\beta}3$ adrenergic receptor wild type and ${\beta}3$ adrenergic receptor mutation groups, body fat was more reduced with statistical significance, and as for BMI change and body weight change were higher in ${\beta}3$ adrenergic receptor mutation groups with no statistical significance. In the comparison of ${\beta}3$ adrenergic receptor wild type and ${\beta}3$ adrenergic receptor mutation groups among BMI under 25 patients change rate of body weight. BMI, body fact percentage, WHR and body circumference were higher in ${\beta}3$ adrenergic receptor mutation group than in ${\beta}3$ adrenergic receptor wild type group. Conclusion: These results imply that herbal dieting program combined with electro-lipolysis-acupuncture is more effective on reducing body weight and body fat in ${\beta}3$ adrenergic receptor mutation group than wild type group, and that the earlier the treatment is applied, the more effective it is.

• KIISE Transactions on Computing Practices
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• v.22 no.3
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• pp.145-150
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• 2016

Finding the exact location of faults in a program requires enormous time and effort. Several fault localization methods based on control flows of a program have been studied for decades. Unfortunately, these methods are not applicable to programs based on data-flow languages. A recently proposed mutation-based fault localization method is applicable to data-flow languages, as well as control-flow languages. However, there are no studies on the effectiveness of the mutation-based fault localization method for data-flow based programs. In this paper, we provided an experimental case study to evaluate the effectiveness of mutation-based fault localization on programs implemented in Function Block Diagram (FBD), a widely used data-flow based language in safety-critical systems implementation. We analyzed several real faults in the implementation of FBD programs of a nuclear reactor protection system, and evaluated the mutation-based fault localization effectiveness for each fault.

• Journal of KIISE:Computing Practices and Letters
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• v.16 no.5
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• pp.571-575
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• 2010

Mutation testing is known as a very useful technique for measuring the effectiveness of a test data set and finding weak points of the test set. An equivalent mutant degrades the effectiveness of mutation testing. Elimination of equivalent mutants is a very important problem in mutation testing.In this paper, we proposed kinds of methods for detecting class-level equivalent mutants. These methods judge the equivalency of mutants through structural informations and behavioral information of the original program and mutants using static analysis. We found that our approach can detect not a few of equivalent mutants and expected that the cost of mutation testing can be saved considerably.

• Environmental Mutagens and Carcinogens
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• v.19 no.1
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• pp.7-13
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• 1999

The mouse lymphoma thymidine kinase (tk+/-) gene assay (MOLY) using L5178Y tk+/- mouse lymphoma cell line is one of the mammalian forward mutation assays. It is well known that MOLY has many advantages and more sensitive than the other mammalian forward mutation assays such as x-linked hyposanthine phosphoribosyltransferase (hprt) gene assay. The target gene of MOLY is a heterozygous tk+/- gene located in 11 chromosome of L5178Y tk+/- cell, so it is able to detect the wide range of genetic changes like point mutation, deletion, rearrangement, and mitotic recombination within tk gene or deletion of entire chromosome 11. MOLY has relatively short expression time (2-3 days) compared to 1 week of hprt gene assay. MOLY can also induce relatively high mutant frequency so a large number of events can be recorded. The bimodal distribution of colony size which may indicate gene mutation and chromosome breakage potential of chemicals according to mutation scale such as large normal-growing mutants and small slow-growing mutants can be observed in this assay. The statistical analysis of data can be performed using the MUTANT program developed by York Electronic Research in association with Hazelton as recommended by the UKEMS (United Kingdom Environmental Mutagen Society) guidelines. This report reviewed MOLY using the microtiter cloning technique (microwell assay).

• Proceedings of the Korean Society of Crop Science Conference
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• 2022.04a
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• pp.19-19
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• 2022

• Genomics & Informatics
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• v.11 no.1
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• pp.34-37
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• 2013

This study evaluated the effects of somatic mutations and single nucleotide polymorphisms (SNPs) on disease progression and tried to verify the two-hit theory in cancer pathogenesis. To address this issue, SNP analysis was performed using the UCSC hg19 program in 10 acute myeloid leukemia patients (samples, G1 to G10), and somatic mutations were identified in the same tumor sample using SomaticSniper and VarScan2. SNPs in KRAS were detected in 4 out of 10 different individuals, and those of DNMT3A were detected in 5 of the same patient cohort. In 2 patients, both KRAS and DNMT3A were detected simultaneously. A somatic mutation in IDH2 was detected in these 2 patients. One of the patients had an additional mutation in FLT3, while the other patient had an NPM1 mutation. The patient with an FLT3 mutation relapsed shortly after attaining remission, while the other patient with the NPM1 mutation did not suffer a relapse. Our results indicate that SNPs with additional somatic mutations affect the prognosis of AML.