• Title/Summary/Keyword: ocean modeling

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Enzymes and Their Reaction Mechanisms in Dimethylsulfoniopropionate Cleavage and Biosynthesis of Dimethylsulfide by Marine Bacteria

  • Do, Hackwon;Hwang, Jisub;Lee, Sung Gu;Lee, Jun Hyuck
    • Journal of Marine Life Science
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    • v.6 no.1
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    • pp.1-8
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    • 2021
  • In marine ecosystems, the biosynthesis and catabolism of dimethylsulfoniopropionate (DMSP) by marine bacteria is critical to microbial survival and the ocean food chain. Furthermore, these processes also influence sulfur recycling and climate change. Recent studies using emerging genome sequencing data and extensive bioinformatics analysis have enabled us to identify new DMSP-related genes. Currently, seven bacterial DMSP lyases (DddD, DddP, DddY, DddK, DddL, DddQ and DddW), two acrylate degrading enzymes (DddA and DddC), and four demethylases (DmdA, DmdB, DmdC, and DmdD) have been identified and characterized in diverse marine bacteria. In this review, we focus on the biochemical properties of DMSP cleavage enzymes with special attention to DddD, DddA, and DddC pathways. These three enzymes function in the production of acetyl coenzyme A (CoA) and CO2 from DMSP. DddD is a DMSP lyase that converts DMSP to 3-hydroxypropionate with the release of dimethylsulfide. 3-Hydroxypropionate is then converted to malonate semialdehyde by DddA, an alcohol dehydrogenase. Then, DddC transforms malonate semialdehyde to acetyl-CoA and CO2 gas. DddC is a putative methylmalonate semialdehyde dehydrogenase that requires nicotinamide adenine dinucleotide and CoA cofactors. Here we review recent insights into the structural characteristics of these enzymes and the molecular events of DMSP degradation.

Analysis of Seafarers' Behavioral Error on Collision Accidents (충돌사고에 대한 해기사의 행동오류 분석)

  • Yim, Jeong-Bin
    • Journal of Navigation and Port Research
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    • v.43 no.4
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    • pp.237-242
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    • 2019
  • Behavioral errors of the seafarers are one of the major causes of collisions and are usually corrected through education and training. To correct this behavioral error, the structure in which the behavioral error occurs needs to be identified and analyzed. For this purpose, behavior observation data were obtained through ship maneuvering simulation for collision encounters. The 9-state behavior classification frame proposed by Reason was used for the behavior observation and 50 university students were involved in the experiment. Behavioral analysis used the behavioral model of collision avoidance success and failure, which was developed from the 9-state Left-to-Right Hidden Markov modeling technique. As a result of the experiment, the difference between behaviors of success and failure of collision avoidance was clearly identified, and the linkage between 9-state behaviors, required to prevent collision, was derived.

Estimating the Behavior Path of Seafarer Involved in Marine Accidents by Hidden Markov Model (은닉 마르코프 모델을 이용한 해양사고에 개입된 선원의 행동경로 추정)

  • Yim, Jeong-Bin
    • Journal of Navigation and Port Research
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    • v.43 no.3
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    • pp.160-165
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    • 2019
  • The conduct of seafarer is major cause of marine accidents. This study models the behavior of the seafarer based on the Hidden Markov Model (HMM). Additionally, through the path analysis of the behavior estimated by the model, the kind of situations, procedures and errors that may have caused the marine accidents were interpreted. To successfully implement the model, the seafarer behaviors were observed by means of the summarized verdict reports issued by the Korean Maritime Safety Tribunal, and the observed results converted into behavior data suitable for HMM learning through the behavior classification framework based on the SRKBB (Skill-, Rule-, and Knowledge-Based Behavior). As a result of modeling the seafarer behaviors by the type of vessels, it was established that there was a difference between the models, and the possibility of identifying the preferred path of the seafarer behaviors. Through these results, it is expected that the model implementation technique proposed in this study can be applied to the prediction of the behavior of the seafarer as well as contribute to the prioritization of the behavior correction among seafarers, which is necessary for the prevention of marine accidents.

Study on the Skin-frictional Drag Reduction Phenomenon by Air Layer using CFD Technique (CFD 기법을 활용한 공기층에 의한 마찰항력 감소 현상 연구)

  • Kim, Hee-Taek;Kim, HyoungTae;Lee, Dong-Yeon
    • Journal of the Society of Naval Architects of Korea
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    • v.56 no.4
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    • pp.361-372
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    • 2019
  • The flow pattern of air layers and skin-friction drag reduction by air injection are investigated to find the suitable multiphase flow model using unstructured finite-volume CFD solver for the Reynolds-averaged Navier-Stokes equations. In the present computations, two different multiphase flow modeling approaches, such as the Volume of Fluid (VOF) and the Eulerian Multi-Phase (EMP), are adopted to investigate their performances in resolving the two-phase flow pattern and in estimating the frictional drag reduction. First of all, the formation pattern of air layers generated by air injection through a circular opening on the bottom of a flat plate are investigated. These results are then compared with those of MMkiharju's experimental results. Subsequently, the quantitative ratios of skin-friction drag reduction including the behavior of air layers, within turbulent boundary layers in large scale and at high Reynolds number conditions, are investigated under the same conditions as the model test that has been conducted in the US Navy's William B. Morgan Large Cavitation Channel (LCC). From these results, it is found that both VOF and EMP models have similar capability and accuracy in capturing the topology of ventilated air cavities so called'air pockets and branches'. However, EMP model is more favorable in predicting quantitatively the percentage of frictional drag reduction by air injection.

Vector form intrinsic finite-element analysis of static and dynamic behavior of deep-sea flexible pipe

  • Wu, Han;Zeng, Xiaohui;Xiao, Jianyu;Yu, Yang;Dai, Xin;Yu, Jianxing
    • International Journal of Naval Architecture and Ocean Engineering
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    • v.12 no.1
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    • pp.376-386
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    • 2020
  • The aim of this study was to develop a new efficient strategy that uses the Vector form Intrinsic Finite-element (VFIFE) method to conduct the static and dynamic analyses of marine pipes. Nonlinear problems, such as large displacement, small strain, and contact and collision, can be analyzed using a unified calculation process in the VFIFE method according to the fundamental theories of point value description, path element, and reverse motion. This method enables analysis without the need to integrate the stiffness matrix of the structure, because only motion equations of particles established according to Newton's second law are required. These characteristics of the VFIFE facilitate the modeling and computation efficiencies in analyzing the nonlinear dynamic problem of flexible pipe with large deflections. In this study, a three-dimensional (3-D) dynamical model based on 3-D beam element was established according to the VFIFE method. The deep-sea flexible pipe was described by a set of spatial mass particles linked by 3-D beam element. The motion and configuration of the pipe are determined by these spatial particles. Based on this model, a simulation procedure to predict the 3-D dynamical behavior of flexible pipe was developed and verified. It was found that the spatial configuration and static internal force of the mining pipe can be obtained by calculating the stationary state of pipe motion. Using this simulation procedure, an analysis was conducted on the static and dynamic behaviors of the flexible mining pipe based on a 1000-m sea trial system. The results of the analysis proved that the VFIFE method can be efficiently applied to the static and dynamic analyses of marine pipes.

A Study on Inductive Power Line Communication with Metal Block Channel (금속블록 채널이 있는 유도형 전력선통신에 관한 연구)

  • Sohn, Kyung-Rak;Kim, Hyun-Sik
    • Journal of IKEEE
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    • v.25 no.1
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    • pp.95-100
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    • 2021
  • If we know the location of the hull block and the welding feeder in the shipyard, we can easily obtain the location information of the worker. That data is very useful for implementing a workplace safety monitoring system. However, it is difficult to apply a fixed communication network to the workplace due to the specificity of the hull structure and welding process. In this study, inductive power line communication, which can replace dedicated communication line, was reviewed. A ferrite core was used as an inductive coupler to be installed on the power cable of the welding machine, and a nano-crystalline core was applied as a coupler to be fastened to the support rod of the metal block. In order to visualize the operating principle of the proposed couplers, 3D modeling and finite element analysis were performed with the COMSOL AC/DC module. In the communication performance test using an aluminum profile, when the communication channel was formed by the contact of the welding electrode, the bandwidth was kept above 6 Mbps.

Transient Stability Analysis of Vessel Power System Using Alternative Marine Power (육상전원공급장치(AMP) 이용한 선내 전원 공급 시 계통 안정도 분석)

  • Seung-pyo Kang;Jang-mok Kim;Hyun-jun Cho
    • Journal of the Korean Society of Marine Environment & Safety
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    • v.29 no.2
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    • pp.215-222
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    • 2023
  • Alternative marine power (AMP) is continuously used in ports and on docks because of regulations on global ship emission reduction. In Korea, the use of AMP is also mandatory under the Special Act on Port Air Quality Improvement, and efforts are under way in connection with various eco-friendly ships, such as electric-propulsion ships. In this study, AC load flow analysis was performed by modeling the situation in which onboard power is supplied through AMP. This analysis made it possible to study the electrical parameters and losses when power was supplied to the ship. In addition, through a transient stability analysis, the high-speed generation transfer limit value for uninterruptible conversion through onboard generators in the event of a system accident was derived. The results obtained when it was applied are presented

Coastal upwelling observed off the East coast of Korea and variability of passive sound detection environment (동해 연안에서 관측된 용승현상과 수동 음탐환경의 변화)

  • Sang-Shin, Byun;Chang-Bong, Cho
    • The Journal of the Acoustical Society of Korea
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    • v.41 no.6
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    • pp.601-609
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    • 2022
  • In August 2007, coastal upwelling occurred off the east coast of Korea, and vertical water temperature and salinity data were obtained from a real-time surface ocean buoy. Based on the time series observation data, a vertical sound velocity structure was calculated before, during, and after the occurrence of the coastal upwelling, and how the coastal upwelling affects the sound propagation and detection environment through acoustic modeling considering the horizontal scale and actual seabed topography. As a result of comparing and analyzing the low-frequency (500 Hz) sound transmission loss and the target detection range by depth using the parabolic equation model, it was analyzed that if coastal upwelling occurs, a detection gain of up to about 10 dB can be expected. In addition, through this study, it was confirmed that the characteristics of sound propagation can be greatly changed even in a short period of about 2 to 3 days before and after coastal upwelling.

Acoustic Interface Element on Nonconformal Finite Element Mesh for Fluid-Structure Interaction Problem (비적합 유한요소망에 적용가능한 유체-구조물 연결 요소)

  • Cho, Jeong-Rae;Lee, Jin Ho;Cho, Keunhee;Yoon, Hyejin
    • Journal of the Earthquake Engineering Society of Korea
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    • v.27 no.4
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    • pp.163-170
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    • 2023
  • In the fluid-structure interaction analysis, the finite element formulation is performed for the wave equation for dynamic fluid pressure, and the dynamic pressure is defined as a degree of freedom at the fluid nodes. Therefore, to connect the fluid to the structure, it is necessary to connect the degree of freedom of fluid dynamic pressure and the degree of freedom of structure displacement through an interface element derived from the relationship between dynamic pressure and displacement. The previously proposed fluid-structure interface elements use conformal finite element meshes in which the fluid and structure match. However, it is challenging to construct conformal meshes when complex models, such as water purification plants and wastewater treatment facilities, are models. Therefore, to increase modeling convenience, a method is required to model the fluid and structure domains by independent finite element meshes and then connect them. In this study, two fluid-structure interface elements, one based on constraints and the other based on the integration of nonsmooth functions, are proposed in nonconformal finite element meshes for structures and fluids, and their accuracy is verified.

Assessment of Antarctic Ice Tongue Areas Using Sentinel-1 SAR on Google Earth Engine (Google Earth Engine의 Sentienl-1 SAR를 활용한 남극 빙설 면적 변화 모니터링)

  • Na-Mi Lee;Seung Hee Kim;Hyun-Cheol Kim
    • Korean Journal of Remote Sensing
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    • v.40 no.3
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    • pp.285-293
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    • 2024
  • This study explores the use of Sentinel-1 Synthetic Aperture Radar (SAR), processed through Google Earth Engine (GEE), to monitor changes in the areas of Antarctic ice shelves. Focusing on the Campbell Glacier Tongue (CGT) and Drygalski Ice Tongue (DIT),the research utilizes GEE's cloud computing capabilities to handle and analyze large datasets. The study employs Otsu's method for image binarization to distinguish ice shelves from the ocean and mitigates detection errors by averaging monthly images and extracting main regions. Results indicate that the CGT area decreased by approximately 26% from January 2016 to January 2024, primarily due to calving events,while DIT showed a slight increase overall,with notable reduction in recent years. Validation against Sentinel-2 optical images demonstrates high accuracy,underscoring the effectiveness of SAR and GEE for continuous, long-term monitoring of Antarctic ice shelves.