• Title/Summary/Keyword: national conservation genetic resource

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Subspecific Status of the Korean Tiger Inferred by Ancient DNA Analysis

  • Lee, Mu-Yeong;Hyun, Jee-Yun;Lee, Seo-Jin;An, Jung-Hwa;Lee, Eun-Ok;Min, Mi-Sook;Kimura, Junpei;Kawada, Shin-Ichiro;Kurihara, Nozomi;Luo, Shu-Jin;O'Brien, Stephen J.;Johnson, Warren E.;Lee, Hang
    • Animal Systematics, Evolution and Diversity
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    • 제28권1호
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    • pp.48-53
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    • 2012
  • The tiger population that once inhabited the Korean peninsula was initially considered a unique subspecies (Panthera tigris coreensis), distinct from the Amur tiger of the Russian Far East (P. t. altaica). However, in the following decades, the population of P. t. coreensis was classified as P. t. altaica and hence forth the two populations have been considered the same subspecies. From an ecological point of view, the classification of the Korean tiger population as P. t. altaica is a plausible conclusion. Historically, there were no major dispersal barriers between the Korean peninsula and the habitat of Amur tigers in Far Eastern Russia and northeastern China that might prevent gene flow, especially for a large carnivore with long-distance dispersal abilities. However, there has yet to be a genetic study to confirm the subspecific status of the Korean tiger. Bone samples from four tigers originally caught in the Korean peninsula were collected from two museums in Japan and the United States. Eight mitochondrial gene fragments were sequenced and compared to previously published tiger subspecies' mtDNA sequences to assess the phylogenetic relationship of the Korean tiger. Three individuals shared an identical haplotype with the Amur tigers. One specimen grouped with Malayan tigers, perhaps due to misidentification or mislabeling of the sample. Our results support the conclusion that the Korean tiger should be classified as P. t. altaica, which has important implications for the conservation and reintroduction of Korean tigers.

흑산도 산림유전자원보호구역의 산림식생 유형 (Classification of Forest Vegetation for Forest Genetic Resource Reserve Area in Heuksando sland)

  • 이정은;신재권;김동갑;윤충원
    • 한국환경생태학회지
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    • 제32권3호
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    • pp.289-302
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    • 2018
  • 본 연구는 흑산도 산림유전자원보호구역을 대상으로 산림식생구조를 파악하고자 수행하였으며, 2017년 6월부터 2017년 8월까지 총 59개 조사구에서 식생조사를 실시하였다. Z-M 식물사회학적 방법으로 산림식생 유형을 분류하고 식생단위별 구성종의 중요치와 종다양도를 분석하였다. 산림식생유형분류 결과 최상위 단위에서 동백나무군락군으로 분류되었으며, 군락단위에서는 황칠나무군락(식생단위 1), 소사나무군락, 동백나무전형군락(식생단위 6)의 3개 군락으로 분류되었다. 소사나무군락은 회양목군(식생단위 2), 진달래군(식생단위 3), 왕머루군(식생단위 4), 소사나무전형군(식생단위 5)의 4개 소군으로 분류되었다. 식생단위별 평균상대우점치 분석 결과 식생단위 1은 붉가시나무, 식생단위 2는 소사나무, 식생단위 3은 곰솔, 식생단위 4는 소나무, 식생단위 5와 6은 구실잣밤나무가 각각 우점치가 가장 높게 나타났다. 종다양도 분석결과 식생단위 2의 종풍부도, 종다양도, 종균재도가 가장 높았으며, 종우점도는 식생단위 6이 가장 높았다. 흑산도 산림유전자원보호구역의 6개 식생단위와 12개 종군에 대한 군집생태학적 접근의 관리방안이 필요할 것으로 판단되었다.

Genetic origin identification of Siberian chipmunks (Tamias sibiricus) in pet shops of South Korea

  • Lee, Seo-Jin;Jung, Gil-A;Min, Mi-Sook;Kim, Chuel-Kyu;Lee, Hang;Kim, Chang-Bae;Lee, Mu-Yeong
    • Animal cells and systems
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    • 제15권2호
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    • pp.161-168
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    • 2011
  • Siberian chipmunks, Tamias sibiricus, are one of several popular companion animals found in the pet shops of South Korea. At present, however, there have been no studies done in South Korea examining their origin even though they could be potential carriers of zoonotic diseases, and are a species of concern for efficient conservation and management strategies. Sequences of the mitochondrial cytochrome b gene (1140 bp) were determined to investigate the origin of Siberian chipmunks sold in four South Korean pet shops through comparison with sequence data from animals of known locality. Nine Siberian chipmunks were collected from pet shops in South Korea, which resulted in nine haplotypes. One (AR) of these coincided with the haplotype previously described. Phylogenetic and network analyses using 53 haplotypes including 45 haplotypes from GenBank showed three phylogenetic groups in South Korea, almost concordant to locality, designated as northern, central, and southern parts as described in a previous study. Of the nine individuals examined from the pet shops, eight were clustered into the northern phylogroup but one (cgrb9153) was grouped with the southern phylogroup, implying that at least the Siberian chipmunks examined in this study did not originate from other countries. It is likely that most individuals sold in the pet shops of Seoul were caught in the wild in Gyeonggi-do and Gangwon-do, or are maternal descendants of captive-bred individuals originating from the northern part of South Korea. It is recommended that conservation and management units of Korean chipmunks should be examined in further detail.

Mitochondrial DNA Diversity of Korean Native Goats

  • Odahara, S.;Chung, H.J.;Choi, S.H.;Yu, S.L.;Sasazaki, S.;Mannen, H.;Park, C.S.;Lee, J.H.
    • Asian-Australasian Journal of Animal Sciences
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    • 제19권4호
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    • pp.482-485
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    • 2006
  • Korean native goats have lived on the Korean peninsula for more than 2,000 years and are regarded as a valuable genetic resource for the world. As an initial step to investigate the genetic structures of this breed, phylogenetic analysis and calculation of genetic diversities have been performed using mitochondrial DNA (mtDNA) sequence variations. A total of 19 Korean native goats were grouped into six haplotypes and the large majority of haplotypes were present in 13 animals. All mtDNA of these Korean goats belonged to the mitochondrial (mt) lineage A and revealed remarkably small genetic distances within the population when compared with other Asian goat populations, indicating less genetic variation in the Korean native goats. These results indicate high-inbred status of the Korean native goats and will influence breeding and conservation strategies adopted for this breed.

한국 해산어류의 종다양성 및 보전 (Diversity and Conservation of Korean Marine Fishes)

  • 김진구
    • 한국어류학회지
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    • 제21권sup1호
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    • pp.52-62
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    • 2009
  • 한반도 주변 3개 해역은 서로 다른 지형과 다양한 해류의 교차로 종다양성의 근간이 된다. 또한, 복잡한 해류가 만나는 전선 주변으로는 좋은 어장이 형성된다. 그러나, 남획에 의한 자원의 감소 및 EEZ 발효에 의한 어장의 축소는 새로운 수산자원 관리법을 필요로 하게 되었다. 수산자원의 효율적 관리를 위해 우선 다양한 해양환경에 적응한 지역개체군의 실체를 파악하는 것이 필요하다. 지역개체군의 형태 및 유전에 관한 연구는 자원의 관리단위 및 구역을 명확히 하는 데 기여할 것이다. 최종적으로 해역별 수산자원의 관리방안 제시가 가능할 것으로 기대된다.

Species and Sex Identification of the Korean Goral (Nemorhaedus caudatus) by Molecular Analysis of Non-invasive Samples

  • Kim, Baek Jun;Lee, Yun-Sun;An, Jung-hwa;Park, Han-Chan;Okumura, Hideo;Lee, Hang;Min, Mi-Sook
    • Molecules and Cells
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    • 제26권3호
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    • pp.314-318
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    • 2008
  • Korean long-tailed goral (Nemorhaedus caudatus) is one of the most endangered species in South Korea. However, detailed species distribution and sex ratio data on the elusive goral are still lacking due to difficulty of identification of the species and sex in the field. The primary aim of this study was to develop an economical PCR-RFLP method to identify species using invasive or non-invasive samples from five Korean ungulates: goral (N. caudatus), roe deer (Capreolus pygargus), feral goat (Capra hircus), water deer (Hydropotes inermis) and musk deer (Moschus moschiferus). The secondary aim was to find more efficient molecular sexing techniques that may be applied to invasive or non-invasive samples of ungulate species. We successfully utilized PCR-RFLP of partial mitochondrial cytochrome b gene (376 bp) for species identification, and sex-specific amplification of ZFX/Y and AMELX/Y genes for sexing. Three species (goral, goat and water deer) showed distinctive band patterns by using three restriction enzymes (Xbal, Stul or Sspl). Three different sexing primer sets (LGL331/335 for ZFX/Y gene; SE47/48 or SE47/53 for AMELX/Y gene) produced sex-specific band patterns in goral, goat and roe deer. Our results suggest that the molecular analyses of non-invasive samples might provide us with potential tools for the further genetic and ecological study of Korean goral and related species.

Population genetic structure based on mitochondrial DNA analysis of Ikonnikov's whiskered bat (Myotis ikonnikovi-Chiroptera: Vespertilionidae) from Korea

  • Park, Soyeon;Noh, Pureum;Choi, Yu-Seong;Joo, Sungbae;Jeong, Gilsang;Kim, Sun-Sook
    • Journal of Ecology and Environment
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    • 제43권4호
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    • pp.454-461
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    • 2019
  • Background: Ikonnikov's whiskered bat (Myotis ikonnikovi) is found throughout the Korean Peninsula, as well as in Kazakhstan, Russia, Mongolia, China, and Japan. It is small-sized and primarily inhabits old-growth forests. The decrease and fragmentation of habitats due to increased human activity may influence the genetic structure of bat populations. This study was designed to elucidate the population genetic structure of M. ikonnikovi using mitochondrial genes (cytochrome oxidase I and cytochrome b). Results: The results showed that M. ikonnikovi populations from Korea have high genetic diversity. Although genetic differentiation was not detected for the COI gene, strong genetic differentiation of the Cytb gene between Mt. Jeombong and Mt. Jiri populations was observed. Moreover, the results indicated that the gene flow of the maternal lineage may be limited. Conclusions: This study is the first to identify the genetic population structure of M. ikonnikovi. We suggest that conservation of local populations is important for sustaining the genetic diversity of the bat, and comprehensive studies on factors causing habitat fragmentation are required.

국립 용현자연휴양림일대 산림유전자원보호구역의 관속식물상 (The Flora of Protected Area for Forest Genetic Resource Conservation in the National Yonghyeon Natural Recreation Forest, South Korea)

  • 변준기;신재권;정수영;김동갑
    • 한국자원식물학회지
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    • 제30권2호
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    • pp.219-239
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    • 2017
  • 본 연구는 국립용현자연휴양림일대 관속식물상을 밝히고 주요 식물의 분포를 파악하고자 2014년 2월부터 2014년 9월까지 총 7회에 걸쳐 조사를 실시하였다. 관속식물은 95과 280속 398종 3아종 50변종 9품종의 총 460분류군이며, 이 중 한국 특산식물은 총 6분류군, 산림청 지정 희귀식물은 8분류군이 조사되었다. 식물구계학적 특정식물종은 IV등급 7분류군, III등급 7분류군, II등급 12분류군, I등급에는 17분류군 등 총 43분류군이 분포하고 있었다. 귀화식물은 39분류군으로 확인되었으며, 귀화율은 8.5%로 나타났다. 조사된 470분류군의 유용도는 식용 189분류군(41.1%), 약용 155분류군(33.7%), 목초용 177분류군(38.5%), 관상용 52분류군(11.3%), 목재용 17분류군(3.7%), 섬유용 12분류군(2.6%), 공업용 3분류군(0.7%)로 나타났다. 본 연구지역은 식생은 양호하나 인위적인 간섭에 의한 훼손이 일어나고 있으며, 장기모니터링을 통해 관속식물상과 식생 동태파악이 이루어져야 할 것으로 판단된다.

Mitochondrial DNA Diversity of Korean Ogol Chicken

  • Lee, Y.J.;Bhuiyan, M.S.A.;Chung, H.J.;Jung, W.Y.;Choi, K.D.;Jang, B.G.;Paek, W.K.;Jeon, J.T.;Park, C.S.;Lee, J.H.
    • Asian-Australasian Journal of Animal Sciences
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    • 제20권4호
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    • pp.477-481
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    • 2007
  • Korean Ogol chicken has been registered as a natural monument in Korea and regarded as a valuable genetic resource for the world. As an initial step to investigate the genetic structures of this breed, phylogenetic analysis and calculation of genetic diversities have been performed using mitochondrial DNA (mtDNA) sequence variations. A total of 31 Korean Ogol chicken was grouped into four haplotypes and the large haplotype was represented in 12 individuals. The unrooted neighbor-joining tree indicates that the Korean Ogol chicken shared three (A to C) major chicken lineages representing the high genetic variability of this breed. These results can be used for making the breeding and conservation strategies for the Korean Ogol chicken.

Perspectives provided by leopard and other cat genomes: how diet determined the evolutionary history of carnivores, omnivores, and herbivores

  • Kim, Soonok;Cho, Yun Sung;Bhak, Jong;O'Brian, Stephen J.;Yeo, Joo-Hong
    • BMB Reports
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    • 제50권1호
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    • pp.3-4
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    • 2017
  • Recent advances in genome sequencing technologies have enabled humans to generate and investigate the genomes of wild species. This includes the big cat family, such as tigers, lions, and leopards. Adding the first high quality leopard genome, we have performed an in-depth comparative analysis to identify the genomic signatures in the evolution of felid to become the top predators on land. Our study focused on how the carnivore genomes, as compared to the omnivore or herbivore genomes, shared evolutionary adaptations in genes associated with nutrient metabolism, muscle strength, agility, and other traits responsible for hunting and meat digestion. We found genetic evidence that genomes represent what animals eat through modifying genes. Highly conserved genetically relevant regions were discovered in genomes at the family level. Also, the Felidae family genomes exhibited low levels of genetic diversity associated with decreased population sizes, presumably because of their strict diet, suggesting their vulnerability and critical conservation status. Our findings can be used for human health enhancement, since we share the same genes as cats with some variation. This is an example how wildlife genomes can be a critical resource for human evolution, providing key genetic marker information for disease treatment.