• 제목/요약/키워드: mtDNA polymorphism

검색결과 65건 처리시간 0.028초

제주마의 mitochondrial DNA 다형(多型)의 분석(分析) (Mitochondrial DNA polymorphism in the Cheju horses)

  • 한방근;장덕지;츠치다 슈이치;이케모토 시게노리
    • 대한수의학회지
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    • 제34권2호
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    • pp.243-247
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    • 1994
  • As a result of the detection of mitochondrial DNA(mtDNA) polymorphism to Thoroughbred and Percheron using 14 restriction enzymes, mtDNA polymorphism of Cheju horse observed in the Bam HI and Sac I. Only in both restriction enzymes two types were classified as of A type, which is high expression frequency and B type, which is low expression frequency. In the other 12 restriction enzymes mtDNA polymorphism was not detected. On the basis of this information mtDNA polymorphism of Cheju horse was examined but was not observed the polymorphism and only A type was expressed both Bam HI and Sac I restriction enzymes. Through this study Cheju horse was demonstrated that lower genetic variation was expressed from the detection of mtDNA polymorphism.

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미토콘드리아 DNA 제한효소 절단부위 변이에 의한 Anopheles quadrimaculatus (Say) 모기의 자매종 구별 (restriction Site Polymorphism of mtDNA for differentiating Anopheles quadrimaculatus (Say) Sibling Species)

  • 김상석
    • 한국응용곤충학회지
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    • 제29권2호
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    • pp.132-135
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    • 1990
  • Anopheles quadrimaculatus( Say) 자매종 간의 미토콘드리아 DNA의 제한효소 절단부위변이를 Aedes albopictus의 마토콘드리아 cDNA를 probe로 이용하여 조사하였다. DNA hybridization에 의해 두 속간에는 mtDNA 영기서열의 상당한 상동성이 있음을 알 수 있었다. 개체 모기로부터 분리한 DNA를 제한효소를 사용하여 절단한 결과 자매종간에 다른 양상을 볼 수 있었으며 Hind III에 의한 mtDNA 절편만으로도 자매종들을 동정할 수 있었다.

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한국 동해안에서 서식하는 진주담치(Mytilus edulis)의 미토콘드리아 DNA 다형현상 (Motochondrial DNA Polymorphism of the Blue Mussel (Mytilus edulis) Species Complex on the East Coast of Korea)

  • 김익수;민병윤;윤명희;김도훈
    • 생명과학회지
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    • 제9권3호
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    • pp.262-267
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    • 1999
  • Mitochondrial DNA (mtDNA) polymorphism of the blue mussel (Mytilus edulis) species complex sampled from the east coast of Korean was studied using a partial sequence of COIII gene (336 bp). Samples obtained from three localities on the east coast of Korea revealed four haplotypes with two clearly differentiated mitochondrial clades (termed clades B and E), separated by 4.2% of minimum sequence divergence. This pattern indicates no difference between east and south coasts of Korea. According to population genetic theory on evolutionary characteristics of mtDNA, we concluded that mtDNA introgression from M. edulis to M. gallprovincialis might be a source for mtDNA polymorphism found in mussels on the east coast of Korea.

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DNA 다형(多型)에 있어서 진도견(珍島犬)과 잡종견(雜種犬)과의 비교(比較) (Polymorphism of mitochondrial DNA in Jindo dogs and Japanese mongrels dogs)

  • 한방근;김주헌;강주원;이케모토 시게노리
    • 대한수의학회지
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    • 제33권1호
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    • pp.43-51
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    • 1993
  • Mitochondrial DNA(mt DNA) of Mammalian is the circular one which the 16.5K base pairs and show the maternal inheritance. Evolutional speed of nucleotide sequence is very fast. So that polymorphic analysis of mt DNA provide the useful informations to investigate the genetic relations of interspecies. Authors trials were focussed to compare with the polymorphic differences of mitochondrial DNA between Jindo and Japanese mongrel dogs. DNA was extracted from bloods of 21 head of Jindo dogs and 20 head of Japanese dogs and isolated using 10 kinds of restriction endonucleases(Apa I, BamH I, Bgl II, EcoR I, EcoR V, Hinc II. Hind III, Pst I, Sty I, Xba I) and then separated by the agarose gel electrophoresis. After sourthern blotting hybridization was completed using the mtDNA of Japanese mongrel dogs as a probe. Autoradiography was used to compare the polymorphism of mtDNA both dogs. The results obtained were as follows; 1. mt DNA of Jindo dog showed polymorphism resulting cleavage with four kinds of restriction endonuclease, Apa I, EcoR V, Hinc II, Sty I. While in the Japanese mongrel dogs observed the polymorphism in the five kinds of restriction endonuclease supplemented with EcoR I. 2. Compared with both dogs the frequency differences of DNA polymorphism were recognized in the specific restriction endonuclease Apa I. Consequently in the restriction endonuclease Apa I both dogs classified with three types as A, B, C however in the Jindo dogs frequency of C type was 71.5 percent but in Japanese mongrel dogs observed 45 percent in the A type. 3. DNA polymorphism obtained from the use of five kinds of restriction endonuclease were classified with seven types. In Jindo dogs frequency was highest in the type 6 as 71.4 percent but in the Japanese mongrel dogs showed 35 percent in the type 5. 4. Genetic distances calculated by NEI method showed 0.0089 in Jindo dogs and was 0.0094 in the Japanese mongrel dogs.

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Relationship between Endurance Performance and Genetic Polymorphisms of Mitochondrial DNA in Korean Male Elite Athletes

  • Jang Dai-Ho;Kang Byung-Yong;Jung In-Geun;Oh Sang-Duk;Lee Kang-Oh
    • 대한의생명과학회지
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    • 제11권2호
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    • pp.227-235
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    • 2005
  • It has been reported that endurance performance is influenced by various environmental and genetic factors. In view of an important role of human mitochondrial DNA (mtDNA) as a candidate for endurance performance, this study focused on the relationships between $VO_{2max}$ value as a measure of endurance performance or other associated phenotypes and four mtDNA restriction fragment length polymorphisms (RFLPs) (Bam HI, Hinc II1, Hinc II2 and Nci I) in the NADH dehydrogenase subunit 5 and one (Kpn I) in the D-loop region of mtDNA. MtDNA was purified from buffy coat in human peripheral blood, and PCR-RFLP analysis was performed to estimate the allele frequencies of each polymorphism in the mtDNA. There were no significant differences in allele distributions of all polymorphisms studied between male athletes and controls, respectively (P>0.05). However, the Kpn I polymorphism was significantly associated with diastolic blood pressure level in male athletes, respectively (P<0.05). Therefore, our results suggest that this polymorphism might be one of the factors modifying inter-individual difference in cardiovascular risk. Further studies using larger sample size will be required to generalize these results from the study described herein.

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Unusual Mitochondrial DNA Polymorphism of the Blue Mussel (Mytilus edulis) Species Complex on the Southern Coast of Korea

  • Iksoo Kim;Byung-Yoon Min;Myung-Hee Yoon;Myong-Suk Yoo;Doh-Hoon Kim
    • Animal cells and systems
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    • 제3권1호
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    • pp.79-87
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    • 1999
  • Mitochondrial DNA (mtDNA) from 54 specimens of the blue mussel (Mytilus edulis) species complex sampled from the southern coast of Korea was assayed for polymorphism with a portion of the COIII gene (336 bp). Fifteen haplotypes were found. PAUP, one-step networks, and PHYLIP analyses revealed the presence of two clearly differentiated mitochondrial clades (termed clades B and E), separated by 3.6% of minimum sequence divergence. The distribution pattern of the species appears to be consistent with category II of the phylogeographic pattern sensu (Avise et al., 1987): the presence of two discontinuous and distinct mtDNA genotypes in the same geographic region. This unusual mitochondrial polymorphism was explained by the presence of the Mediterranean species, M. galloprovincialis, possessing mtDNA of both M. galloprovincialis and M. edulis.

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대식가시아메바(Acmthamoebapokphaga) 일곱 분리주간의 동위효소 profile과 Mitochondria DNA fingerprint의 다양성 (Interstrain polymorphisms of isoenzyme profiles and mitochondrial DNA fingerprints among seven strains assigned to Acanthamoeba polyphaga)

  • 공현희;박준형;정동일
    • Parasites, Hosts and Diseases
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    • 제33권4호
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    • pp.331-340
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    • 1995
  • 형태적으로 Aconthamoeba polyphaga로 동정긴 일곱 분리주의 동위효소 profile과 Mitochondria (Mt) DNAangerprint를 비교 분석하였다. 8가지 제한효소(B91 II. Sca I, Cla I, EcoR I, Xba I, Kpa I, Sal I. 및 Sst I)에 의한 Mt DNA fhlgerprint는 주간의 심한 다양성을 나타내었다. B가지 동위효소 (acid phosphatase, lactate dehydrogenase 및 glucose-6-phosphate dehydrogenase)는 주간의 심한 다양성을 나타내었으나 다른 3가지 동위효소(glucose phosphate isomerase, leucine aminopeptidase 및 malatedehydrogenase)는 비슷한 양상으로 나타났다 Ap 주의 동위효소 양상과 Mt DNA fmgerprint는 Jones 주와 동일하였다. Mt DNA fingerprinting은 대식가시아메바 주의 동정과 분리에 매우 유용함을 알았다. Aconthamoeba polvphasa의 우리말 학명을 대식가시아메바로 제안한다.

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세계 14지역 계통에 대한 초파리 미토콘드리아 DNA의 다형현상 (Mitochondrial DNA polymorphism in Fourteen Geographical Strains of Drosophila melanogoater)

  • 김봉기
    • 한국동물학회지
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    • 제31권3호
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    • pp.218-224
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    • 1988
  • Drosophila melanogaster의 세계 14지역 계통으로부터 mitochondrial DNA(mtDNA)를 추출하여, 제한 요소에 의하여 mtDNA종내 변이를 조사하였다. 그 결과, site variation(Hpall와 Haelll 및 Seal효소)과 length variation(최대550bp)이 나타났다. 또한 6종류(Ml, M2, M3, M4, M6 및 M7)의 mtDNA genotype이 검출되었으며, 종내 평균 염기 치환율은 1.88%로써 낮은 지역 분화(low divergence)를 나타내었다. 그러나 일본의 Ogasawara계통의 M5 type은 본 연구에서는 검출되지않았다. 이처럼 지역 계통간의 낮은 지역 분화는 세계14지역 계통의 D. melanogaster가 최근에 소수의 개체로부터 확산되었기 때문에 집단전체에 아직 충분한 mtDNA변이가 축적되지 않았거나 혹은 지리적 격리가 충분함에도 불구하고 지역 계통간에 빈번한 migration이 일어났기 때문에 mtDNA의 지역 분화가 방해되지않은 것으로 추측된다.

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황해산 참조기(Pseudosciaena polyactis)의 계군 분석을 위한 분자생물학적 방법 검정 (Preliminary Analysis of Molecular Biological Methods for Stock Identification of Small Yellow Croaker(Pseudosciaena polyactis) in the Yellow Sea)

  • 허회권;황규린;인영철;장정순
    • 한국수산과학회지
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    • 제25권6호
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    • pp.474-484
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    • 1992
  • 황해서식 참조기(Pseudosciaena polyactis)에 대한 계군을 분석하기 위한 연구의 일환으로 우선 황해의 목포 연근해에서 채집된 참조기의 난자와 근육으로부터 mt-DNA와 근육 actin을 추출하였다. 난자의 경우 mt-DNA를 추출한 뒤 제한효소로 처리하여 절편다형현상을 관찰하였으며 근육 actin의 경우 단백질 분해효소(Staphylococcus aureus $V_8$ protease)로 처리하여 N-terminal 절편의 다형현상을 각각 관찰하였다. Mt-DNA의 genome 크기는 약 $\16\pm0.2$ Kb였고 전체 절편수는 37개였으며 사용된 20개의 제한효소 중 8개의 제한효소만이 3개 정도의 절편을 보이므로써 유의성을 관찰할 수 있었다 한편 근육 actin을 Staphylococcus aureus $V_8$단백질 분해효소로 처리하였을 때 N-terminal 부위에서 26 KDa 및 16 KDa의 분자량을 갖는 특이절편을 관찰할 수 있었다.

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Improved Procedure for Large-scale Isolation of Mitochondrial DNA from Mammalian Tissues

  • Hong, Sung-Soo;Lee, Chung-Choo
    • Animal cells and systems
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    • 제3권1호
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    • pp.73-78
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    • 1999
  • Although there are several methods for the preparation of mitochondrial DNA (mtDNA) from mammalian tissues, most are relatively long ultracentrifugation or manipulations by a small-scale method. We escribed a rapid method for large-scale extraction of mtDNA from human placental and horse liver tissues. The method is based on the preparation and homogenization of tissues, urification of crude mitochondria by differential centrifugations and isolation of mtDNA by alkaline Iysis. It was improved from Pre-existing methods by replacing some steps with simpler ones and discarding many others. This method gives a high yield of pure mtDNA(approximately 1-5mg from one placenta; ca. 400-600 g wet weight), depending on its sources (fresh tissue gave better results than frozen one). The resulting mtDNA indicated that this method can yield mtDNA in sufficient purity and quantity to identify the direct restriction analysis on agarose gel, random-primed labeling as a probe, and end labeling. Therefore, the method is ideal for obtaining good mtDNA samples to conduct routine restriction fragment length polymorphism (RFLP) analyses of natural populations for genetic studies.

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