• 제목/요약/키워드: molecular systematics

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Population Genetic Structure of Carassius auratus (Pisces: Cypriniformes) in South Korea Inferred from AFLP Markers: Discordance with Mitochondrial Genetic Structure

  • Jung, Jongwoo
    • Animal Systematics, Evolution and Diversity
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    • v.29 no.1
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    • pp.18-22
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    • 2013
  • A recent study on the mitochondrial genetic variation of the Carassius auratus population in South Korea suggested that there are 3 distinct mitochondrial lineages in the country, and that they are geographically separated between westward rivers and southward rivers, respectively. In this study, the population genetic structure of amplified fragment length polymorphism (AFLP) of Carassius auratus was investigated. The results of analysis of molecular variance (AMOVA) supported the geographic distinction between westward and southward river populations, but only 3.66% of total genetic variance lies among these populations. The panmicticity of the AFLP genetic variation is backed up by the results of the neighbor-joining dendrogram drawn from a linearized pairwise $F_{ST}$ matrix and Bayesian clustering analysis. The discordance of genetic structure between mitochondrial and AFLP genetic variation may come from difference in effective population size between these markers and/or gene flow between westward and southward river populations through river capture events.

First Record of Platorchestia monodi (Crustacea: Amphipoda: Talitridae) from the Pacific Region

  • Kim, Min-Seop;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.27 no.3
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    • pp.205-212
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    • 2011
  • Platorchestia monodi (Mateus et al., 1986), the beach hopper, commonly lives in sea shores and was previously reported only from the Atlantic regions, such as Mid-Atlantic islands, Brazilian coast, and Israel. We present the first record of this species in the Pacific region. The present species can be clearly distinguished from related species by the shapes of gnathopods 1-2 and development of sexual dimorphism in antenna 2 and pereopod 7. Descriptions of the diagnostic characteristics of the species are provided on the text. In addition, this paper also provided the partial sequence of the mitochondrial cytochrome c oxidase subunit 1 (CO1) gene of the species for its molecular characteristics.

A Newly Recorded Sea Cucumber of the Genus Psolus (Holothuroidea: Dendrochirotida: Psolidae) from the East Sea of Korea

  • Lee, Taekjun;Shin, Sook
    • Animal Systematics, Evolution and Diversity
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    • v.33 no.3
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    • pp.195-199
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    • 2017
  • A sea cucumber was collected from Gonghyeonjin in the East Sea of Korea at a depth of 50 m on 22 June 2011 and was identified as Psolus phantapus (Strussenfelt, 1765). This species belongs to the family Psolidae of the order Dendrochirotida based on morphological characteristics and mitochondrial cytochrome c oxidase subunit I sequence analysis. Psolus phantapus, which widely distributes in the Arctic and North Atlantic Oceans, is newly recorded in the Korean fauna. Two Psolus species including the previously reported P. squamatus are recorded in the East Sea of Korea.

First Record of the Omura's Whale (Balaenoptera omurai) in Korean Waters

  • Kim, Ji Hye;Kim, Hyun Woo;Kim, Eun-Mi;Sohn, Hawsun
    • Animal Systematics, Evolution and Diversity
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    • v.34 no.3
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    • pp.162-167
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    • 2018
  • To confirm the genetic identification and phylogenetic relationships of unidentified 6 baleen whales by-caught from 2002 to 2016, a partial sequence of approximately 500 base pair (bp) of the mitochondrial DNA (mtDNA) control region was analyzed and compared to published sequence from Genbank. Our results indicated that the two individuals among 6 specimens are clustered with Omura's whale clade through phylogenetic analysis, which had only a single haplotype. Omura's whale was reclassified as a new species in 2003 and they had not been previously reported in Korean waters. This study firstly revealed existence of Omura's whale in Korean waters by molecular analysis based on mtDNA control region.

Molecular diversity and morphology of the genus Actinotrichia (Galaxauraceae, Rhodophyta) from the western Pacific, with a new record of A. robusta in the Andaman Sea

  • Wiriyadamrikul, Jutarat;Lewmanomont, Khanjanapaj;Boo, Sung Min
    • ALGAE
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    • v.28 no.1
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    • pp.53-62
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    • 2013
  • Actinotrichia is a calcified galaxauracean red algal genus with temperate and tropical distributions in the Indian and Pacific Oceans. Morphological characteristics, along with rbcL and cox1 sequences, were analyzed from specimens collected in the western Pacific and the Indian Oceans. Both rbcL and cox1 data confirmed the occurrence of A. fragilis, A. robusta, and Actinotrichia sp. in this region. The presence of A. fragilis was verified in tropical Indo-Pacific and temperate northeast Asian waters and was characterized by high genetic diversity. Although A. robusta commonly occurs in the East China Sea, we confirmed its presence on rocks and crustose algae in the subtidal zone of three islands in the Andaman Sea. Actinotrichia sp. was similar to A. calcea in morphology and distribution, but with sufficiently different sequences, thus, additional sampling over the range will enable a more realistic evaluation of its taxonomic status.

A Report on Five New Records of Nudibranch Molluscs from Korea

  • Jung, Daewui;Lee, Jongrak;Kim, Chang-Bae
    • Animal Systematics, Evolution and Diversity
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    • v.30 no.2
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    • pp.124-131
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    • 2014
  • The Korean nudibranch faunal study has been conducted since 2011 and five species including Dermatobranchus otome Baba, 1992, Mexichromis festiva (Angas, 1864), Noumea nivalis Baba, 1937, Hoplodoris armata (Baba, 1993), and Okenia hiroi (Baba, 1938) were newly reported with re-descriptions and figures. Also, Noumea purpurea Baba, 1949 was re-described with illustrations because previous records for this species were given without a description. Two congeneric species in the genus Noumea could be distinguished by ground color, dorsal markings, color of the mantle edge and gills, and mantle and dorsal marking. In addition, mitochondrial cytochrome c oxidase subunit I (COI) sequences of five species were provided for further molecular identification study. Consequently, a total of 43 species have been reported for the Korean nudibranch fauna.

Terrestrial Hypotrichous Ciliates from Chindo Island, Korea (진도의 육상하모섬모충류)

  • Shin, Mann-Kyoon;Kim, Won
    • Animal Systematics, Evolution and Diversity
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    • v.12 no.1
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    • pp.17-24
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    • 1996
  • Five hypotrichs inhabiting the representative aquatic and terrestrial habitats of Chindo Island, Strongylidium muscorum, Gonostomum affine, Histriculus cavicola, H. muscorum, Steinia quadrinucleata are discovered from Chindo Island. Of these, two species, Strongylidium muscorum Kahl, 1932 and Steinia quadrinucleata Dragesco and Njine, 1971 are newly recorded from Korea.

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Taxonomic Review of the Genus Diaphanosoma (Branchiopoda, Ctenopoda, Sididae), with a Redescription of Diaphanosoma dubium in Korea (한국산 긴꼬리물벼룩속(새각강, 즐지목, 긴꼬리물벼룩과)의 분류학적 검토와 긴팔긴꼬리물벼룩(Diaphanosoma dubium)의 재기재)

  • Yoon, Seong-Myeong;Kim, Won
    • Animal Systematics, Evolution and Diversity
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    • v.16 no.1
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    • pp.113-122
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    • 2000
  • Diaphanosoma dubium Manuilova, frequently confused with the species group of D. brachyurum Lieven and misidentified as an invalid species of D. leuchtenber-gianum Fischer in the Far East, was redescribed and illustrated. Redescription was based on the materials collected from various freshwater habitats at 76 localities in South Korea during the period from May 1978 to June 1999. Previous records of Diaphanosoma species from Korea were examined. D. dubium is well distinguished from other related species by having large head, longer swimming antennae with a thin seta on the outer distal side of basipod, carapace lacking dorsal spine at the posterior carapace margin, and fewer denticles on the ventro-posterior carapace margin.

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First Record of Cleantioides planicauda (Crustacea: Isopoda: Holognathidae) from South Korea

  • Song, Ji-Hun;Kim, Min-Seop;Min, Gi-Sik
    • Animal Systematics, Evolution and Diversity
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    • v.30 no.1
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    • pp.26-32
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    • 2014
  • Cleantioides planicauda (Benedict, 1899) has previously been recorded in China and Japan. In the present study, to our knowledge, we report for the first time the occurrence of this species in South Korea. Here, we provide detailed descriptions and illustrations of the diagnostic characteristics of C. planicauda. Further, for the first time, we determined the partial sequence of mitochondrial cytochrome c oxidase subunit 1 (CO1) gene of C. planicauda for molecular characteristic. Additionally, we provide a key to the Korean species and distribution of the genus Cleantioides. As a result of this study, four species of the genus Cleantioides, including C. planicauda, have now been recorded in South Korea.

First Report of Aphelenchoides bicaudatus (Nematoda: Aphelenchoididae) from South Korea

  • Kim, Jiyeon;Kim, Taeho;Park, Joong-Ki
    • Animal Systematics, Evolution and Diversity
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    • v.32 no.4
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    • pp.253-257
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    • 2016
  • The genus Aphelenchoides (Fischer, 1894) includes a diverse group of species, some of which are of economic importance. A. bicaudatus (Imamura, 1931) Filipjev and Schuurmans Stekhoven, 1941 is reported for the first time from South Korea, with a detailed redescription of the species. Specimens were collected from chrysanthemum (Chrysanthemum morifolium) leaves and shoot tips in South Korea. The species was identified by morphological traits and molecular sequencing. A bifurcated tail distinguishes A. bicaudatus from its congeneric species. To confirm species identification, we determined the partial 18S ribosomal DNA sequence of the specimens and compared with those obtained from other Aphelenchoides species available on GenBank.