• Title/Summary/Keyword: medical ontology

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Extracting Ontology from Medical Documents with Ontology Maturing Process

  • Nyamsuren, Enkhbold;Kang, Dong-Yeop;Kim, Su-Kyoung;Choi, Ho-Jin
    • Proceedings of the Korea Information Processing Society Conference
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    • 2009.04a
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    • pp.50-52
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    • 2009
  • Ontology maintenance is a time consuming and costly process which requires special skill and knowledge. It requires joint effort of both ontology engineer and domain specialist to properly maintain ontology and update knowledge in it. This is specially true for medical domain which is highly specialized domain. This paper proposes a novel approach for maintenance and update of existing ontologies in a medical domain. The proposed approach is based on modified Ontology Maturing Process which was originally developed for web domain. The proposed approach provides way to populate medical ontology with new knowledge obtained from medical documents. This is achieved through use of natural language processing techniques and highly specialized medical knowledge bases such as Unified Medical Language System.

Development and Evaluation of Ontology for Diagnosis in Oriental Medicine (한의진단 Ontology 구축과 평가)

  • Shin Sang-Woo;Jung Gil-San;Park Kyung-Mo;Kim Seon-Ho;Park Jong-Hyun
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.20 no.1
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    • pp.202-208
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    • 2006
  • The goal of this study is to develop knowledge representation method for the construction and evaluation of ontology for diagnosis in oriental medicine. To develop the expert system for decision making on diagnosis and treatment, the systematic and structural knowledge which can be processible in EMR(Electronic Medical Record) must be precedent, and the Computational Process which control the system as well. This study set up an ontology as a trial model to represent the oriental medical knowledge into the machine processible one. Protege 2.1 has been used to build the ontology, and the serialization format of our ontology is the XML document based on OWL. The components of oriental medical diagnosis was arranged with the combination of symptoms which belong to the certain symptom patterns. Then natural language which expresses the oriental medical diagnosis components were converted into the logical sentence, and individual characteristic symptoms into each values of specific properties. In addition to the study, the diagnosis software for oriental medicine was developed and it used the ontology which we developed. Sequently, we tested the software to confirm the appropriateness of ontology. The result of the test shows that diagnostic questions are automatically formulated according to the diagnosis components of this ontology and that as such diagnostic results are induced. Therefore, the ontology system in this study will be efficient to develop the diagnosis program and useful as a tool for doctors to make decision. But, it is not recommendable to apply the system to the clinical environment until the clear diagnosis standards are introduced, and the more reliable diagnosis program can be developed based on the more appropriate ontology mentioned above.

A Study of the Case Analysis of Conceptual Modeling of Medical Terminologies by Ontology (온톨로지를 이용한 의학용어의 개념 모델링 사례 분석 연구)

  • Lee, Hyun-Sil
    • Journal of the Korean Society for information Management
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    • v.21 no.3
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    • pp.141-160
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    • 2004
  • Recent reseach in the field of medical information systems has paid much attention to an ontology based medical terminology system to support clinical study and effective information search. This study aims to conduct research for further application or construction of ontology systems in Korea. This research reviews the theory of concept modeling and ontology. and analyses 4 cases of conceptual modeling of medical tenrminologies by ontology, The findings ot this study display these specific characteristics in medscal ontologies: (UHe standardization of terrrinology on MeSH. (2) The conceptualization of tenninology on UMLS. (l) ane. (2) are showed as untormal ontologies. (3) The theory of ontology integration in ON9, (4) The reference model of medical knowledge with formalization in GALEN. (3) and (4) are showed as formal ontologies. The application and construction of ontology should be differentiated according to the level of the proposed system, and then this analysis will provide useful information for the researcher and developer of the system.

A Comparison of Bio and Medical Ontologies (생물학과 의학 온톨로지 비교 분석)

  • Yu, Jeong-Youn;Eom, Dong-Myung;Lee, Kyu-Chul
    • Korean Journal of Oriental Medicine
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    • v.12 no.2 s.17
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    • pp.31-45
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    • 2006
  • Bioinformatics and medical informatics have moved to make its knowledge more systematically and computationally using ontology. These ontologies help querying ring and analyzing data and used to develop application in biomedical. However, no research about ontology of oriental medical exists. Thus, to maximize the power of transitional knowledge, it is necessary to construct the ontology for oriental medical. This paper compares the ontologies of bio and medic by an objective point of view to guide the construction of oriental medic ontologies.

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Oriental Medical Ontology for Personalized Diagnostic Services (맞춤형 진단 서비스를 위한 한의학 온톨로지)

  • Moon, Kyung-Sil;Park, Su-Hyun
    • Journal of the Korea Society of Computer and Information
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    • v.15 no.1
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    • pp.23-30
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    • 2010
  • With the advancement of information technology and increasing diversity in medical field, there are ongoing researches on ontology based intelligent medical system in Oriental medicine field. Intelligent diagnostic support system uses ontology to give a structure to complex medical knowledge and personal medical history so that we can make diagnosis more scientific, and provide better medical services. In this paper, we suggest an ontology that structuralize three knowledge types basic medical data, clinical trial data, and personal health information, which can be used as important information for individually tailored diagnosis. Especially in Oriental medicine diagnosis, both patient's symptoms of illness and physical constitution play a great role; it can lead to distinct diagnosis depending on their combination. Thus, it is much needed to have a diagnostic support system that uses personal health history and physical constitution along with basic medical data and clinical trial data in the field. In this paper, we implemented an Oriental medicine diagnostic support system that provides individualized diagnosis service to each patient by building an ontology on Oriental medicine focused on individual physical constitution and disease information.

A Study on the Ontology-Based Context Aware System for MBAN (MBAN(Medical Body Area Network)에서의 온톨로지 기반 상황인지 시스템 개발에 관한 연구)

  • Wang, Jong Soo;Lee, Dong Ho
    • Journal of Korea Society of Digital Industry and Information Management
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    • v.7 no.1
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    • pp.19-29
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    • 2011
  • The u-Healthcare system, a new paradigm, provides healthcare and medical service anytime, anywhere in daily life using wired and wireless networks. It only doesn't reach u-Hospital at home, to manage efficient personal health in fitness space, it is essential to feedback process through measuring and analyzing a personal vital signs. MBAN(Medical Body Area Network) is a core of this technology. MBAN, a new paradigm of the u-Healthcare system, can provide healthcare and medical service anytime, anywhere on real time in daily life using u-sensor networks. In this paper, an ontology-based context-awareness in MBAN proposed system development methodology. Accordingly, ontology-based context awareness system on MBAN to Elderly/severe patients/aged/, with measured respiratory rate/temperature/pulse and vital signs having small variables through u-sensor network in real-time, discovered abnormal signs and emergency situations which may happen to people at sleep or activity, alarmed and connected with members of a family or medical emergency alarm(Emergency Call) and 119 system to avoid sudden accidents for early detection. Therefore, We have proposed that accuracy of biological signal sensing and the confidence of ontology should be inspected.

The Design of Diseases of Mind Diagnosis Support System Using Ontology (온톨로지를 이용한 마음의 병 진단 보조 시스템 설계)

  • Baek, Hyeon-Gi
    • The Journal of Korean Medical History
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    • v.25 no.2
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    • pp.105-112
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    • 2012
  • The purpose of this paper is to suggest diagnosis support system for diseases of mind so that users can make effective decisions without professional knowledge by developing efficient knowledge system and utilizing ontology with which questions and logic inference are possible to diagnose diseases of mind. Furthermore, this diagnosis support system could be applied to supplement previous diagnosis method which depends on experiences by activating the diagnose of mind diseases thru ontology and determining state of mind effectively without technical knowledge. As a result of this experiment, diagnosis support system for diseases of mind was found to be accordance with the result of consulting instructions and show additional relevance thru utility extension.

Development of Voice Guide Service for Pharmaceutical Information based on Ontology

  • Lee, Kyung Min;Kang, Min Soo;Jung, Yong Gyu
    • International Journal of Advanced Culture Technology
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    • v.6 no.1
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    • pp.50-59
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    • 2018
  • Generally, disabled people have a lot of bad health status at low income levels, the need for health care is higher than for non-disabled people. Although the number of persons with disabilities is increasing with each passing year, their medical services and support are still limited and limited. This problem is not so different from approach to medical information. Conventional medical information is usually printed and transmitted to the patient, but visually impaired people have difficulty accessing such printed information. In the case of the visually impaired, there are many cases where it is not possible to read not only the printed letter but also the braille because the acquired incidence is high. Therefore, this paper tried to solve this problem by transmitting the information of medicine by voice using RFID. In addition, ontology was used to select more accurate drug information. Currently, there are drug information sites provided by the Ministry of Health and Welfare. However, since duplicate information is scattered on these sites, the ontology was used to build up the database.

Reasoning and Learning Methods for Diagnosis in Oriental Medicine (한의 진단 추론과 진단 학습 방법)

  • Kim, Sang-Kyun;Kim, Jin-Hyun;Jang, Hyun-Chul;Kim, An-Na;Yea, Sang-Jun;Kim, Chul;Song, Mi-Young
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.23 no.5
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    • pp.942-949
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    • 2009
  • We in this paper propose the method for diagnosis patients through the reasoning based on the diagnosis ontology in oriental medicine. In prior studies, it is simply diagnosed with the information of main symptoms, optional symptoms, and tongue / pulse. In addition, ontology itself has subjective opinions of oriental medical doctors for patients in form of axioms. There is a problem in latter case that it is difficult for other oriental medical doctors to change knowledge within the ontology. In order to solve these problems, we have constructed the diagnosis ontology and the reasoning algorithm as followings: First, in order to raise the diagnosis accuracy, we constructed the diagnosis ontology with pattern identifications, main symptoms, optional symptoms, and tongue / pulse. We also utilize the diagnosis points described in the pathology textbook, which has been studied in all of domestic oriental medical colleges. This information is represented as OWL instances in ontology, not OWL axioms so that it can be easily updated. Second, we suggest the algorithms for diagnosis reasoning and learning method based on the ontology. We have implemented the reasoning and learning system according to the diagnosis algorithm. In future study, we will construct the diagnosis ontology with all of pattern identifications and symptoms within the pathology textbook.

Study on a Methodology for Developing Shanghanlun Ontology (상한론(傷寒論)온톨로지 구축 방법론 연구)

  • Jung, Tae-Young;Kim, Hee-Yeol;Park, Jong-Hyun
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.25 no.5
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    • pp.765-772
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    • 2011
  • Knowledge which is represented by formal logic are widely used in many domains such like artificial intelligence, information retrieval, e-commerce and so on. And for medical field, medical documentary records retrieval, information systems in hospitals, medical data sharing, remote treatment and expert systems need knowledge representation technology. To retrieve information intellectually and provide advanced information services, systematically controlled mechanism is needed to represent and share knowledge. Importantly, medical expert's knowledge should be represented in a form that is understandable to computers and also to humans to be applied to the medical information system supporting decision making. And it should have a suitable and efficient structure for its own purposes including reasoning, extendability of knowledge, management of data, accuracy of expressions, diversity, and so on. we call it ontology which can be processed with machines. We can use the ontology to represent traditional medicine knowledge in structured and systematic way with visualization, then also it can also be used education materials. Hence, the authors developed an Shanghanlun ontology by way of showing an example, so that we suggested a methodology for ontology development and also a model to structure the traditional medical knowledge. And this result can be used for student to learn Shanghanlun by graphical representation of it's knowledge. We analyzed the text of Shanghanlun to construct relational database including it's original text, symptoms and herb formulars. And then we classified the terms following some criterion, confirmed the structure of the ontology to describe semantic relations between the terms, especially we developed the ontology considering visual representation. The ontology developed in this study provides database showing fomulas, herbs, symptoms, the name of diseases and the text written in Shanghanlun. It's easy to retrieve contents by their semantic relations so that it is convenient to search knowledge of Shanghanlun and to learn it. It can display the related concepts by searching terms and provides expanded information with a simple click. It has some limitations such as standardization problems, short coverage of pattern(證), and error in chinese characters input. But we believe this research can be used for basic foundation to make traditional medicine more structural and systematic, to develop application softwares, and also to applied it in Shanghanlun educations.