• The Journal of Korean Society of Virology
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• v.27 no.1
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• pp.59-68
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• 1997

Hantaan virus Howang strain which isolated from the blood of severe case of Korean hemorrhagic fever is more virulent than HTN 76/118 and showed different RFLP from partial PCR amplifed M genome segment to established Hantaan serotype viruses. We have determined the nucleotide sequence of the M and S genome segments and compared to HTN 76/118. The M and S segment of Howang strain has 3615 and 1696 nucleotides long, respectively. The M segment sequence of Howang strain is one mucleotide shorter than HTN 76/118. The sequence data of Howang strain shows 93.5% homology to HTN 76/118. One long open reading frame, which strats from 41nt. to 3448nt. of the M segment and from 37nt. to 1326nt. of the S segment, exist to on complementary sense of the virus genome. There are no significant difference between HTN 76/118 and Howang strain on hydrophobicity of deduced polypeptides, but has slight difference on secondary structure.

• Journal of Microbiology and Biotechnology
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• v.14 no.5
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• pp.1022-1030
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• 2004

The gene encoding Aquifex pyrophilus (Apy) DNA polymerase was cloned and sequenced. The Apy DNA polymerase gene consists of 1,725 bp coding for a protein with 574 amino acid residues. The deduced amino acid sequence of Apy DNA. polymerase showed a high sequence homology to Escherichia coli DNA polymerase I-like DNA polymerases. It was deduced by amino acid sequence alignment that Apy DNA polymerase, like the Klenow fragment, has only the two domains, the $3'{\rightarrow}5'$ exonuclease domain and the $5'{\rightarrow}3'$ polymerase domain, containing the characteristic motifs. The Apy DNA polymerase gene was expressed under the control of T7lac promoter on the expression vector pET-22b(+) in E. coli. The expressed enzyme was purified by heat treatment, and Cibacron blue 3GA and $UNO^{TM}$ Q column chromatographies. The optimum pH of the purified enzyme was 7.5, and the optimal concentrations of KCl and $Mg^{2+}$ were 20 mM and 3 mM, respectively. Apy DNA polymerase contained a double strand-dependent $3'{\rightarrow}5'$ proofreading exonuclease activity, but lacked any detectable $5'{\rightarrow}3'$ exonuclease activity, which is consistent with its amino acid sequence. The somewhat lower thermostability of Apy DNA polymerase than the growth temperature of A. pyrophilus was analyzed by the comparison of amino acid composition and pressure effect.

• Journal of Life Science
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• v.9 no.2
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• pp.9-14
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• 1999

Pseudomonas iodinum IFO 3558 adenosine deaminase(ADA) gene was cloned by the polymerase chain reaction and deduced the amino acid sequence of the enzyme. DNA sequence homology of Pseudomonas iodinum IFO 3558 ADA gene was compared to those of E. coli, human and mouse ADA genes. Unambiguous sequence from both strands of pM21 was obtained for the region believed to encode ADA. The sequence included a 804-nucleotide open reading frame, bounded on one end by sense primer and on the other end by two antisense primer. This open reading frame encodes a protein of 268 amino acids having a molecular weight of 29,448. The deduced amino acid sequence shows considerable similarity to those of E. coli, mouse and human ADA. Pseudomonas iodinum IFO 3558 nucleotide sequence shows 98.5% homology with that of the E. coli ADA sequence and 51.7% homology with that of the mouse ADA sequence and 52.5% homology with that of the human ADA sequence. The ADA protein sequence of Pseudomonas iodinum IFO 3558 shows 96.9% homology with that of the E. coli and 40.7% homology with that of the mouse and 41.8% homology with that of the human. The distance between two of the conserved elements, TVHAGE and SL(1)NTDDP has veen exactly conserved at 76 amino acids for all four ADAs. Two of the four conserved sequence elements shared among the four ADAs are also present in the yeast, rat, human (M), and Human(L) AMP deaminase. The SLSTDDP sequence differs only in the conservative substitution of a serine for an asparagine. A conserved cysteine with conserved spacing between these two regions is also found. Thus, sequence analysis of four ADAs and four AMP deaminases revealed the presence of a highly conserved sequence motif, SLN(S)TDDP, a conserved dipeptide, HA, and a conserved cysteine residue.

• The Journal of the Acoustical Society of Korea
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• v.21 no.8
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• pp.686-694
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• 2002

This paper proposes an algorithm for estimating positions of array elements placed on a sea floor using acoustic signal in multipath ocean environment. The positions of array elements are estimated by using the travel times of m-sequence signal influenced by the multi-paths environment. The horizontal distance between source and receiver calculated based on the ray model. The proposed paper the algorithm is verified by both simulation data and field experiment in the Bast Sea.

• Journal of applied mathematics & informatics
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• v.37 no.1_2
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• pp.37-52
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• 2019

In this paper we introduce a new concept for Riesz almost lacunary ${\chi}^3$ sequence spaces strong P - convergent to zero with respect to an Orlicz function and examine some properties of the resulting sequence spaces. We introduce and study statistical convergence of Riesz almost lacunary ${\chi}^3$ sequence spaces and some inclusion theorems are discussed.

• The Journal of Korean Society of Virology
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• v.29 no.1
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• pp.23-31
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• 1999

Hantavirus is a genus of the Bunyaviridae family causing two serious diseases, hemorrhagic fever with renal syndrome (HFRS) and hantavirus pulmonary syndrome (HPS). Puumala virus is a member of hantavirus originally found in Europe, and its natural reservoir is Clethrionomys glareolus. It is also associated with the human disease nephropathia epidemica, a milder form of HFRS. To identify the hantaviruses in bats, bats were collected from Jeong-Sun, Won-Joo, Chung-Ju and Hwa-Cheon area in Korea, and nested RT-PCR was performed with serotype specific primer from M segment. Interestingly, Puumala virus was detected in bats (Rhinolophus ferrum-equinum) only from Won-Joo. The 327 bp nested RT-PCR product, was sequenced. The sequence database search indicates that the sequence is homologous to the published sequence of Puumala viruses. The sequence similarities were ranged from 71% to 97%. The highest sequence similarity was 97% with Puumala virus Vranicam strain, and the lowest was 71% with Puumala virus K27 isolate. Puumala virus Vranicam strain was isolated from a bank vole (Clethrionomys glareolus) in Bosnia-Hercegovina. Puumala virus K27 was isolated from human in Russia. This analysis confirms that bats (Rhinolophus ferrum-equinum) in Korea are natural reservoir of Puumala virus.

• Publications of The Korean Astronomical Society
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• v.1 no.1
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• pp.1-8
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• 1984

Under the context of Stein's linear theory of stellar models, the luminosity-effective temperature relationship is derived for contracting pre-main sequence stars which are losing mass, according to the empirical formula, given by Reimers (1975). The effects of mass loss on their evolution are investigated by calculating evolutionary tracks of 1. $1.5M_{\odot}$, $5M_{\odot}$, and $10M_{\odot}$, stars. Our calculations reveal that the effects of mass loss show up in the radiative equilibrium stage of the evolution. It is found that an increase of mass loss rate leads to delay the onset of radiative equilibrium, thus resulting in under-luminous main sequence stars. It is also noted that the mass loss prolongs the pre-main sequence life time. Detailed results of the calculations are discussed.

• Journal of applied mathematics & informatics
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• v.37 no.5_6
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• pp.329-339
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• 2019

The Banach spaces $m^p(\phi)$ and $n^p(\phi)$ are very important sequence spaces related to $l_p$, which were defined to fill the gaps between $l_p(1{\leq}p{\leq}{\infty})$. In this paper, we investigated the solubility of the infinite system of differential equations in $m^p(\phi)$ and $n^p(\phi)$ by proving related theorems. Moreover, one example has been included for the justification of the claim of this paper.

• Korean Journal of Microbiology
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• v.29 no.5
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• pp.284-289
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• 1991

the nucleotide sequence of the 3' terminal 568 bases of the 18S rRNA gene from Mucor racemosus was determined. The 3' end of the structural gene was identified by comparison with the published sequence for the Saccharomyces cerevisiae gene. The M. racemosus gene was found to share 83.8% homology with that of S. cerevisiae and 71-81% homology with those of human, mouse, maize, Xenopus laevis and Tetrahymena thermophila. The known methylation sites in X. laevis and human were also highly conserved in M. racemosus and located within most conserved regions of 18S RNA gene throughout evolution.

• Journal of Communications and Networks
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• v.12 no.4
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• pp.330-333
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• 2010

In this paper, using binary (N, M, L, $\epsilon$) low correlation zone (LCZ) sequence sets, we construct new quaternary LCZ sequence sets with parameters (2N, 2M, L, $2{\epsilon}$). Binary LCZ sequences for the construction should have period $N\;{\equiv}\;3$ mod 4, L|N, and the balance property. The proposed method corresponds to a quaternary extension of the extended construction of binary LCZ sequence sets proposed by Kim, Jang, No, and Chung [1].