• Asian-Australasian Journal of Animal Sciences
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• v.19 no.10
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• pp.1369-1378
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• 2006

This is the first study in which genetic variability and relationships of a large number of Japanese chicken breeds were revealed along with those of several foreign breeds by using microsatellite DNA polymorphisms. Twenty-eight breeds (34 populations) of native Japanese chickens and seven foreign breeds or varieties were analyzed. The mean number of alleles per locus, the proportion of the polymorphic loci, and the expected average heterozygosity ranged from 1.75 to 4.70, from 0.55 to 1.00, and from 0.21 to 0.67, respectively. Microsatellite alleles being unique to a particular population were detected in some populations. The $D_A$ genetic distance between populations was obtained from allele frequency for every pair of the populations to construct a neighbor-joining tree. According to the phylogenetic tree, excluding a few exceptions, native Japanese chicken breeds and foreign breeds were clearly separated from each other. Furthermore, the tree topology divided native Japanese chickens into four main classes, which was almost in accordance with the classification based on body morphology; that is, (1) Cochin type, (2) Malay type, (3) layer type, and (4) intermediate type between Malay and layer types. This is the first finding for native Japanese chickens.

• Natural Product Sciences
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• v.25 no.4
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• pp.354-357
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• 2019

Toxicodendron vernicifluum, also called as Rhus verniciflua is a deciduous tree belonging to Anacardiaceae family. Two new caffeoyl threonate esters, rhuseols A (1) and B (2), together with 5-O-(E)-caffeoylquinic acid methyl ester (3) were isolated from the leaves of T. vernicifluum. The structures of isolated compounds were established by using 1D and 2D NMR in combination with HR-ESI-MS. Compounds 1 - 3 showed DPPH radical scavenging effects with IC₅₀ values of 47.9, 107.8 and 15.4 μM, respectively. Taken together, these compounds might contribute to the antioxidant properties of the leaves of T. vernicifluum, which will be useful for various oxidative stress mediated diseases.

• The KIPS Transactions:PartD
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• v.9D no.2
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• pp.267-276
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• 2002

Existing XML editors, which are usually tree-based, require knowledge on the XML from users. But this requirement should be removed in order for any user to create XML documents easily. In this paper, we developed a new XML editor which provides both the usual tree-based interface and the form-based interface derided from the original document. Editing XML documents through forms will be especially effective in the places such as enterprise or municipal office where a large amount of documents of same format need to be generated. Forms, which are HTML documents, are generated automatically through the XSLT using both template XML document and XSL document, and displayed on the built-in HTML browser. When a form is filled out by user, it will he transformed into its corresponding XML document and stored into the XML repository.

• Proceedings of the IEEK Conference
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• 2007.07a
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• pp.367-368
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• 2007

In this paper, we propose a new de-noising algorithm for 2 dimensional image using discrete wavelet transform. The proposed algorithm consists of edge detection in spatial domain, zero-tree estimation, subband estimation, and shrinkage algorithm. The results from it shows that the denoised image which Is damaged by 20% gaussian noise has 28dB quality for the original one.

• Fisheries and Aquatic Sciences
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• v.21 no.10
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• pp.27.1-27.5
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• 2018

During a survey of marine algal flora, two gigartinalean species were collected from Pohang and Youngdeok located on the eastern coast of Korea. They share the generic morphological features of Dumontia. One is characterized by cylindrical to complanate thallus with multi- and uniaxial structure, somewhat inflated and contorted branches, and hollow medulla and cortex consisting of progressively smaller cells outwards. The other shows basically the same features as the former species but was smaller in size, as having 4-7 cm in thallus length and 1-2 mm in branch width rather than 15 and 2-5 mm. Both species are distinguished from each other only by these morphometric features. However, it is supported by molecular analysis that both species are genetically distinct. In a phylogenetic tree based on internal transcribed spacer sequence, the two species nest in the same clade as Dumontia contorta and D. alaskana, respectively. The genetic distance between both sequences within the clade was calculated as 0.0 0.2%, considered to be intra-specific for Dumontia. Based on the morphological and molecular analyses, the two Korean species are identified as D. contorta and D. alaskana described originally from Netherlands and Alaska, respectively. This is the first record of the two Dumontia species in Korea.

• Journal of Ecology and Environment
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• v.30 no.3
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• pp.251-255
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• 2007

Self-thinning was measured in Salix communities on Bam Island in Seoul at various age stages. $D^2H$ was used to estimate tree biomass, where D is stem diameter at breast height or 10 cm height for plants with height <1.5 m, and H is height. A log-log plot of density versus $D^2H$ and correlation analysis indicated a significant relationship between density and biomass with equation 'log $D^2H$ = -1.27 log N + 7.06'. This indicates that self-thinning affects biomass in the Salix community with -1.27 as the thinning coefficient. If we assume a thinning exponent -3/2, then the allometric coefficient of the equation, log w = a log $D^2H$ + b, is 1.18. This is much higher than that for any other species studied in Korea. There were statistically significant relationships between age and density and between age and basal area and these relationships suggest guidelines for transplantation of willows and for the assessment of Salix community restoration projects in riverine wetlands based on standard density, basal area, and age. The results of this study may also increase understanding of succession processes in Salix community restoration in riverine wetlands.

• Journal of Microbiology and Biotechnology
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• v.20 no.3
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• pp.643-649
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• 2010

Evaluation of the primary etiologic agents that cause aseptic meningitis outbreaks may provide valuable information regarding the prevention and management of aseptic meningitis. In Korea, an outbreak of aseptic meningitis caused by echovirus type 30 (E30) occurred from May to October in 2008. In order to determine the etiologic agent, CSF and/or stool specimens from 140 children hospitalized for aseptic meningitis at Soonchunhyang University Cheonan Hospital between June and October of 2008 were tested for virus isolation and identification. E30 accounted for 61.7% (37 cases) and echovirus 6 accounted for 21.7% (13 cases) of all the human enteroviruses (HEVs) isolates (60 cases in total). For the molecular characterization of the isolates, the VP1 gene sequence of 18 Korean E30 isolates was compared pairwise using the MegAlign with 34 reference strains from the GenBank database. The pairwise comparison of the nucleotide sequences of the VP1 genes demonstrated that the sequences of the Korean strains differed from those of lineage groups A, B, C, D, E, F, and G. Reconstruction of the phylogenetic tree based on the complete VP1 nucleotide sequences resulted in a monophyletic tree, with eight clustered lineage groups. All Korean isolates were segregated from other lineage groups, thus suggesting that the Korean strains were a distinct lineage of E30, and a probable cause of this outbreak. This manuscript is the first report, to the best of our knowledge, of the molecular characteristics of E30 strains associated with an aseptic meningitis outbreak in Korea, and their respective phylogenetic relationships.

• Asian-Australasian Journal of Animal Sciences
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• v.29 no.12
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• pp.1688-1695
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• 2016

The maternally inherited mitochondrial DNA (mtDNA) D-loop region is widely used for exploring genetic relationships and for investigating the origin of various animal species. Currently, domestic ducks play an important role in animal protein supply. In this study, partial mtDNA D-loop sequences were obtained from 145 samples belonging to six South-East Asian duck populations and commercial duck population. All these populations were closely related to the mallard duck (Anas platyrhynchos), as indicated by their mean overall genetic distance. Sixteen nucleotide substitutions were identified in sequence analyses allowing the distinction of 28 haplotypes. Around 42.76% of the duck sequences were classified as Hap_02, which completely matched with Anas platyrhynchos duck species. The neighbor-joining phylogenetic tree also revealed that South-East Asian duck populations were closely related to Anas platyrhynchos. Network profiles were also traced using the 28 haplotypes. Overall, results showed that those duck populations D-loop haplotypes were shared between several duck breeds from Korea and Bangladesh sub continental regions. Therefore, these results confirmed that South-East Asian domestic duck populations have been domesticated from Anas platyrhynchos duck as the maternal origins.

• Journal of the Korean Institute of Landscape Architecture
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• v.42 no.4
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• pp.1-9
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• 2014

This research aims to analyze changes in anion according to locations through changes in the measuring point centering on a single tree. The subject tree was the Zelkova serrata which is most widely used as a landscape tree, and the measurement was conducted for a total of 3 days with summer solstice as the basic date. In consideration of the solar altitude and the location of the Zelkova serrata, a total of 4 measurement points - $T_a$ at the opposite direction of the shadow, $T_b$ in the center of the tree $T_c$ in the center of the shadow, and $T_d$ at the end of the shadow - were established. The mean temperature of the measurement days was the highest at $T_a$ with $28.4^{\circ}C$ and was the lowest at $T_c$, in the center of the shadow with $27.9^{\circ}C$. The relative humidity was the lowest with 42.5% at $T_a$ where the temperature was the highest. The amount of insolation was the highest at $T_a$ with $1,024.6W/m^2$, followed by $T_d(701.48W/m^2$), $T_c$($215.63W/m^2$), and $T_b(227.75W/m^2)$, and the anion was the highest at $T_a$ with $654ea/cm^3$, followed by $T_d$, $T_c$, and $T_b$, with $639.4ea/cm^3$, $615.3ea/cm^3$, $612.3ea/cm^3$, respectively. The results of the correlation analysis proved that anion correlated with the temperature, the amount of insolation, and the relative humidity on the significant level. Of these, the temperature and the amount of insolation had the positive correlation with the correlation coefficients of .687 and .332, respectively, and the significance probability of .000, and .037, respectively. The relative humidity was found to have negative correlation. Its correlation coefficient and the significance probability were -.557, and .000, respectively.

• Proceedings of the KSRS Conference
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• 2004.10a
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• pp.77-80
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• 2004

In this study the spatial distribution characters of burnt forest site was first considered by analyzing spatial data and monitoring forest landscape before/after lire to restore the site. Then suitable tree species on each forest site should be selected through the weighted score analysis of GIS analysis methods. Finally. the best forest stand arrangement method could be simulated on the system for the advanced reforestation technology in Korea. For this purpose, the virtual reforestation system was implemented by using the concept of virtual GIS and CBD (Component Based Development) method. By use of this system the change of forest landscape of burnt forest area some years after reforestation practice could be detected and monitored by applying the site index and 3D modeling method.