• Title/Summary/Keyword: isolation techniques

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Quantitative Analysis of Flavonoid Glycosides in Sophora japonica and Sophora flavescens by HPLC-DAD

  • Kim, Soo Sung;Park, SeonJu;Kim, Nanyoung;Kim, Seung Hyun
    • Natural Product Sciences
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    • v.27 no.4
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    • pp.284-292
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    • 2021
  • Recently, a phytoestrogenic functional food has been developed using the fruits of Sophora japonica. Phytochemical investigation of fruits of S. japonica led to the isolation of eight flavonoid glycosides using various chromatographic techniques. The isolated compounds were identified as genistin (1), sophoricoside (2), genistein 7,4'-di-O-β-D-glucopyransoide (3), sophorabioside (4), genistein-7-O-β-D-glucopyranoside-4'-O-[(α-L-rhamnopyranosyl)-(1→2)-β-D-glucopyranoside] (5), sophoraflavonoloside (6), nicotiflorin (7) and kaempferol-3-O-α-L-rhamnopyranosyl-(1→6)-β-D-glucopyranosyl-(1→3)-β-D-glucopyranoside (8), respectively, by comparison of their spectroscopic data with those reported in the literature. In addition, a new HPLC-DAD method for simultaneous determination of the isolated compounds was developed to quantitate the contents of flavonoids in S. japonica and S. flavescens. The method was validated in terms of limit of detection, limit of quantitation, specificity, linearity, precision and accuracy. The validated method was successfully applied to determine eight flavonoids in two Sophora species. The contents of eight flavonoids varied according to the parts and species. Particularly, it was found that only the fruits of S. japonica contained sophoricoside, a phytoestrogenic isoflavone.

Antioxidant Constituents of Athyrium acutipinnulum (섬고사리의 항산화 성분)

  • Hye Jin Park;Se Hwan Ryu;Sang Won Yeon;Ayman Turk;Solip Lee;Hak Hyun Lee;Bang Yeon Hwang;Mi Kyeong Lee
    • Korean Journal of Pharmacognosy
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    • v.54 no.2
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    • pp.53-60
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    • 2023
  • Athyrium acutipinnulum, called as Ulleungdo ladyfern (Seom-go-sa-ri), is a native plant of South Korea. A. acutipinnulum has been consumed as foods and also traditionally used for the treatment of epilepsy, gonorrhea and nerve disorder. The methanolic extract and EtOAc soluble fraction of A. acutipinnulum showed the antioxidant activity. Fractionation using various chromatographic techniques resulted in the isolation of 13 compounds. The structures were elucidated on the basis of spectroscopic methods as seven phenolic compounds, methyl 2-hydroxy-3-phenylpropanoate (1), protocatechualdehyde (2), caffeic acid (3), trans-p-coumaric acid (4), (-)-4-E-caffeoyl-L-threonic acid (5), 5-O-caffeoyl shikimic acid (6) and 5-O-caffeoyl quinic acid (7), three flavonoids, quercetin 3-O-β-glucoside (8), naringenin-7-O-β-glucoside (9) and sutchenoside A (10), two steroids, ponasterone A (11) and ecdysone (12) and a coumarin, esculetin (13). Among them, compounds 5 and 10 were first reported from Athyrium spp and compounds 2, 5, 6 and 7 showed the antioxidant activity.

An Effective Anomaly Detection Approach based on Hybrid Unsupervised Learning Technologies in NIDS

  • Kangseok Kim
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.18 no.2
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    • pp.494-510
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    • 2024
  • Internet users are exposed to sophisticated cyberattacks that intrusion detection systems have difficulty detecting. Therefore, research is increasing on intrusion detection methods that use artificial intelligence technology for detecting novel cyberattacks. Unsupervised learning-based methods are being researched that learn only from normal data and detect abnormal behaviors by finding patterns. This study developed an anomaly-detection method based on unsupervised machines and deep learning for a network intrusion detection system (NIDS). We present a hybrid anomaly detection approach based on unsupervised learning techniques using the autoencoder (AE), Isolation Forest (IF), and Local Outlier Factor (LOF) algorithms. An oversampling approach that increased the detection rate was also examined. A hybrid approach that combined deep learning algorithms and traditional machine learning algorithms was highly effective in setting the thresholds for anomalies without subjective human judgment. It achieved precision and recall rates respectively of 88.2% and 92.8% when combining two AEs, IF, and LOF while using an oversampling approach to learn more unknown normal data improved the detection accuracy. This approach achieved precision and recall rates respectively of 88.2% and 94.6%, further improving the detection accuracy compared with the hybrid method. Therefore, in NIDS the proposed approach provides high reliability for detecting cyberattacks.

Dispensable role of wild rodents in avian influenza A virus transmission in Gyeonggi province, Korea

  • Chung-Young Lee;Ilhwan Kim;Hyuk-Joon Kwon
    • Korean Journal of Veterinary Research
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    • v.64 no.2
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    • pp.13.1-13.6
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    • 2024
  • Avian influenza A viruses (IAVs) present significant threats to both animal and human health through their potential for cross-species transmission and global spread. Clade 2.3.4.4 H5Nx highly pathogenic avian IAVs initially emerged in East Asia between 2013 and 2014. Since then, they have spread to Europe, Africa, and America via migratory bird flyways. However, beyond viral transmission primarily facilitated by migratory birds, the potential involvement of other intermediate factors for virus transmission remains poorly investigated. This study aimed to investigate the role of wild rodents as intermediary hosts in the ecology of avian IAVs in Gyeonggi province, South Korea. By capturing and analyzing 189 wild rodents near poultry farms and migratory bird habitats in 2013 and 2014 and employing serological assays and virus isolation techniques, we found no evidence of IAV infection among these populations. Our results suggest that wild rodents may not significantly contribute to the transmission dynamics of IAVs within these regions.

The Influence of Simplified Surgical Procedures on the Surgical Treatment for Atrial Fibrillation with using the Cut-and-Sew Technique (절개봉합법을 이용한 심방세동 수술의 중단기 결과)

  • Choi, Jong-Bum;Kim, Jong-Hun;Lee, Mi-Kyung;Lee, Sam-Youn;Kim, Min-Ho;Kim, Kong-Su
    • Journal of Chest Surgery
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    • v.41 no.3
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    • pp.313-319
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    • 2008
  • Background: The Cox maze-III procedure is considered as the most effective surgical treatment for atrial fibrillation. Because this procedure takes a long time and it complicates the concomitant cardiac surgery, some surgeons perform a left atrial maze procedure or pulmonary vein isolation only to reduce the operation time. This study was performed to evaluate how the modified procedures, with using cut-and-sew techniques, can influence the treatment of atrial fibrillation. Material and Method: Between Feb 1999 and June 2005, 40 patients (17 males and 23 females) with organic heart disease and atrial fibrillation underwent the Cox maze-III procedure (23), the left atrial maze procedure (10) or pulmonary vein isolation (7). The cut-an-sew technique was used to ablate the atrial wall, but cryoablation was used instead of the cut-and-sew technique for the coronary sinus and the inferior wall between the pulmonary vein and the mitral annulus. Result: After a mean follow-up period of $50.0{\pm}21.6$ months, all (100%) of the 23 patients who underwent the Cox maze-III procedure had regular sinus or atrial rhythm conversion, and 7(70%) of 10 with a left atrial maze procedure and 4(57.1%) of 7 with pulmonary vein isolation had regular sinus or atrial rhythm conversion (p=0.002). Conclusion: To obtain a high conversion rate from atrial fibrillation to a regular sinus rhythm or a regular atrial rhythm, the standard Cox maze-III procedure should be performed in both atria. The limited modified procedures like the left atrial maze procedure or pulmonary vein isolation may reduce the cure rate of atrial fibrillation.

Optimization of Protoplast Isolation and Ribonucleoprotein/Nanoparticle Complex Formation in Lentinula edodes (표고버섯의 원형질체 분리 최적화와 RNPs/나노파티클 복합체 형성)

  • Kim, Minseek;Ryu, Hojin;Oh, Min Ji;Im, Ji-Hoon;Lee, Jong-Won;Oh, Youn-Lee
    • Journal of Mushroom
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    • v.20 no.3
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    • pp.178-182
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    • 2022
  • Despite the long history of mushroom use, studies examining the genetic function of mushrooms and the development of new varieties via bio-molecular methods are significantly lacking compared to those examining other organisms. However, owing to recent developments, attempts have been made to use a novel gene-editing technique involving CRISPR/Cas9 technology and genetic scissors in mushroom studies. In particular, research is actively being conducted to utilize ribonucleoprotein particles (RNPs) that can be genetically edited with high efficiency without foreign gene insertion for ease of selection. However, RNPs are too large for Cas9 protein to pass through the cell membrane of the protoplasmic reticulum. Furthermore, guide RNA is unstable and can be easily decomposed, which remarkably affects gene editing efficiency. In this study, nanoparticles were used to mitigate the shortcomings of RNP-based gene editing techniques and to obtain transformants stably. We used Lentinula edodes (shiitake mushroom) Sanjo705-13 monokaryon strain, which has been successfully used in previous genome editing experiments. To identify a suitable osmotic buffer for the isolation of protoplast, 0.6 M and 1.2 M sucrose, mannitol, sorbitol, and KCl were treated, respectively. In addition, with various nanoparticle-forming materials, experiments were conducted to confirm genome editing efficiency via the formation of nanoparticles with calcium phosphate (CaP), which can be bound to Cas9 protein without any additional amino acid modification. RNPs/NP complex was successfully formed and protected nuclease activity with nucleotide sequence specificity.

Targeting Analysis of Lumenal Proteins of Chloroplast of Wheat using Proteomic Techniques

  • Kamal, Abu Hena Mostafa;Kim, Da-Eun;Oh, Myoung-Won;Chung, Keun-Yook;Cho, Yong-Gu;Kim, Hong-Sig;Song, Beom-Heon;Lee, Chul-Won;Uozumi, Nobuyuki;Choi, Jong-Soon;Cho, Kun;Woo, Sun-Hee
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2010.05a
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    • pp.14-14
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    • 2010
  • Plastid proteomics are essential organelles present in virtually all cells in plants and green algae. Plastids are responsible for the synthesis and storage of key molecules required for the basic architecture and functions of plant cells. The proteome of plastid, and in particular of chloroplast, have received significant amounts of attention in recent years. Various fractionation and mass spectrometry (MS) techniques have been applied to catalogue the chloroplast proteome and its sub-organelles compartments. To better understanding the function of the lumenal sub-organelles within the thylakoid network, we have carried out a systematical analysis and identification of the lumenal proteins in the thylakoid of wheat by using Tricine-SDS-PAGE, and LTQ-ESI-FTICR mass spectrometry followed by SWISS-PROT database searching. We isolation and fractionation these membrane from fully developed wheat leaves using a combination of differential and gradient centrifugation couple to high speed ultra-centrifuge. After collecting all proteins to eliminate possible same proteins, we estimated that there are 407 different proteins including chloroplast, chloroplast stroma, lumenal, and thylakoid membrane proteins excluding 20 proteins, which were identified in nucleus, cytoplasm and mitochondria. A combination of these three programs (PSORT, TargetP, TMHMM, and TOPPRED) was found to provide a useful tool for evaluating chloroplast localization, transit peptide, transmembranes, and also could reveal possible alternative processing sites and dual targeting. Finally, we report also sub-cellular location specific protein interaction network using Cytoscape software, which provides further insight into the biochemical pathways of photosynthesis. The present work helps understanding photosynthesis process in wheat at the molecular level and provides a new overview of the biochemical machinery of the thylakoid in wheat.

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Identification of Water Soluble Metabolites of Pentachlorophenol(PCP) in the Suspension Cultures of Soybean and Rice Cells;2. Isolation and characterization of PCP glucose conjugates (콩과 벼 현탁배양시(懸濁培養時) PCP 수용성대사물(水溶性代謝物)의 동정(同定);2. PCP glucose conjugates의 분리(分離) 및 분석(分析))

  • Kim, Pil-Je;Park, Chang-Kyu
    • Korean Journal of Environmental Agriculture
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    • v.15 no.1
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    • pp.37-45
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    • 1996
  • Abstracts From the previous metabolic study of Pentachlorophenol(PCP), PCP was found to be exclusively transformed into ${\beta}-glucose$ conjugates of PCP in soybean and rice cell suspension cultures. In order to gather structural information of of the glucose conjugate, their aglycons and glycon have been analyzed by GC and GC/MS respectively, after thorough purification by chromatographic techniques. The glucose conjugates were effectively purified through a 1-butanol extraction followed by Silica gel TLC, Sephadex column chromatography and HPLC. Aglycons of the metabolites were identified as PCP, isomeric mixture of tetrachlorophenol, and tetrachlorocatechol and glycon were identified as glucose, suggesting that there are at least three kinds of glucose conjugates with different phenolic moieties. Under controlled conditions, the glucose conjugates were separated into three HPLC peaks which released respective aglycon upon a hydrolytic treatment. These results give valuable information on the structure of the glucose conjugates such that some PCP-driven chlorophenols, in addition to PCP, are also conjugated with glucose.

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Stabilization System for Mobile Antenna Gimbal based on Dynamic Characteristics Analysis (동특성 해석에 기반한 이동용 안테나 김발 안정화 시스템)

  • Lee, Ki-Nam;Lee, Byoung-Ho;Lee, Jeung;Kim, Jie-Eok;Song, Jae-Bok
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.37 no.7
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    • pp.851-856
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    • 2013
  • Recently, as the tactical environment has changedto one of network-centric warfare, where all components are connected through a network, much emphasis has been placed on the use of an artificial satellite for achieving high communication speeds. To provide a high-quality artificial satellite link, stabilization is very important in a platform. Previous stabilization control techniques used PI control, which is commonly used for vessels. However, for ground terminals that require a higher communication speed, the antenna should move faster to track an artificial satellite within a short period of time. Moreover, the terminals must be equipped with proper sensors and algorithms so that they can detect and compensate for external disturbances while tracking the artificial satellite. In this study, through the analysis of the dynamic model of an antenna system, a stabilization algorithm for ground terminals was proposed;this algorithm shows high isolation performance in the low-frequency range and includes $PI^2$ control.

Imported Malaria in United Arab Emirates: Evaluation of a New DNA Extraction Technique Using Nested PCR

  • Sultan, Doaa M.;Khalil, Marwa M.;Abdouh, Ahmed S.;Doleh, Wafaa F.;AI Muthanna, Abdul Aziz M.
    • Parasites, Hosts and Diseases
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    • v.47 no.3
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    • pp.227-233
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    • 2009
  • Local malaria transmission in the United Arab Emirates (UAE) came to an end in 1997. Nevertheless, UAE has been subjected to substantial importation of malaria cases from abroad, concerning both UAE nationals and immigrants from malarious countries with a total number of 2,119 cases in 2007. To evaluate a new DNA extraction technique using nested PCR, blood samples were collected from 132 individuals who presented to Infectious Diseases Department in Rashid Hospital, Dubai, and Central Department of Malaria Control with fever and persistent headache. Giemsa-stained blood films and ELISA test for malaria antibodies were carried out for detection of Plasmodium infection. Plasmodium infections were identified with the genus-specific primer set and species differentiation using nested PCR. A rapid procedure for diagnosis of malaria infections directly from dried blood spots using for the first time DNA extract from FTA Elute cards was evaluated in contrast to extraction techniques using FTA classic cards and rapid boiling technique. Our new simple technique for DNA extraction using FTA Elute cards was very sensitive giving a sensitivity of 100% compared to 94% using FTA classic cards and 62% in the rapid boiling technique. No complex preparation of blood samples was required prior to the amplification. The production cost of DNA isolation in our PCR assay was much less incomparable to that of other DNA extraction protocols. The nested PCR detected plasmodial infection and could differentiate P. falciparum from P. vivax, and also detected the mixed infection.