• Title/Summary/Keyword: geographic origin

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Molecular evolutionary analysis reveals Arctic-like rabies viruses evolved and dispersed independently in North and South Asia

  • Yu, Xin;Zhu, Hongwei;Bo, Yongheng;Li, Youzhi;Zhang, Jianlong;Jiang, Linlin;Chen, Guozhong;Zhang, Xingxiao;Wen, Yongjun
    • Journal of Veterinary Science
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    • v.22 no.1
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    • pp.5.1-5.16
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    • 2021
  • Background: Arctic-like (AL) lineages of rabies viruses (RABVs) remains endemic in some Arctic and Asia countries. However, their evolutionary dynamics are largely unappreciated. Objectives: We attempted to estimate the evolutionary history, geographic origin and spread of the Arctic-related RABVs. Methods: Full length or partial sequences of the N and G genes were used to infer the evolutionary aspects of AL RABVs by Bayesian evolutionary analysis. Results: The most recent common ancestor (tMRCA) of the current Arctic and AL RABVs emerged in the 1830s and evolved independently after diversification. Population demographic analysis indicated that the viruses experienced gradual growth followed by a sudden decrease in its population size from the mid-1980s to approximately 2000. Genetic flow patterns among the regions reveal a high geographic correlation in AL RABVs transmission. Discrete phylogeography suggests that the geographic origin of the AL RABVs was in east Russia in approximately the 1830s. The ancestral AL RABV then diversified and immigrated to the countries in Northeast Asia, while the viruses in South Asia were dispersed to the neighboring regions from India. The N and G genes of RABVs in both clades sustained high levels of purifying selection, and the positive selection sites were mainly found on the C-terminus of the G gene. Conclusions: The current AL RABVs circulating in South and North Asia evolved and dispersed independently.

Analysis on the Spatial Accessibility of Mental Health Institutions Using GIS in Gangwon-Do (GIS를 이용한 정신의료기관의 공간적 접근성 분석 - 강원도지역을 대상으로)

  • Park, Ju Hyun;Park, Young Yong;Lee, Kwang-Soo
    • Korea Journal of Hospital Management
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    • v.23 no.2
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    • pp.28-41
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    • 2018
  • Purpose: This study purposed to analyze the spatial accessibility of mental health institutions in Ganwon-Do using Geographic Information System and to suggest policy implications. Methodology: Network analysis was applied to assess the spatial accessibility of mental health institutions in Gangwon-Do. To perform the network analysis, network data set was built using administrative district map, road network, address of mental health institutions in Gangwon-Do. After building network data set, Two network analysis methods, 1) Service area analysis, 2) Origin Destination cost matrix were applied. Service area analysis calculated accessive areas that were within specified time. And using Origin Destination cost matrix, travel time and road travel distance were calculated between centroids of Eup, Myeon, Dong and the nearest mental health institutions. Result: After the service area analysis, it is estimated that 19.63% of the total areas in Gangwon-Do takes more than 60 minutes to get to clinic institutions. For hospital institutions, 23.08% of the total areas takes more than 60 minutes to get there. And 59.96% of Gangwon-do takes more than 30 minutes to get to general hospitals. The result of Origin-Destination cost matrix showed that most Eup Myeon Dong in Gangwon-Do was connected to the institutions in Wonju-si, Chuncheon-si, Gangneung-si. And it showed that there were large regional variation in time and distance to reach the institutions. Implication: Results showed that there were regional variations of spatial accessibility to the mental health institutions in Gangwon-Do. To solve this problem, Several policy interventions could be applied such as mental health resources allocation plan, telemedicine, providing more closely coordinated services between mental health institutions and community mental health centers to enhance the accessibility.

Estimation of te origin through Disposable Lighters Monitoring of the nakdong River Esturary Using GIS (GIS을 활용한 낙동강 하구 해안의 일회용라이터 모니터링을 통한 발생지 추정)

  • Kim, Young-Min;Jang, Seon-Woong;Yoon, Hong-Joo
    • The Journal of the Korea institute of electronic communication sciences
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    • v.10 no.6
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    • pp.729-736
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    • 2015
  • In this study, It was analyzed to estimate the origin from the collected disposable lighters with the printed company name and telephone number on the surface. Monitoring was done bimonthly from 2 areas of sandbar Coastline of Nakdong River Estuary(Jinu-do, Shinja-do) and 3 areas(Doomo beach, Heungnam beach, Yeocha beach) of Northeastern coast of Geoje-do. As a result of the monitoring, there were 166 lighters collected. Then, the monthly occurrence amount was concentrated in Jun, August. The origin of Disposable lighters that flowed in study area were mostly cause to the Nakdong River basin region and the coastal area where population densities are high.

IDENTIFICATION OF GEOGRAPHICAL ORIGIN AND VARIETY OF GREEN COFFEE BY NIR

  • Nzabonimpa, Rukundo;Prodolliet, Jacques;Vouilloz, Annick
    • Proceedings of the Korean Society of Near Infrared Spectroscopy Conference
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    • 2001.06a
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    • pp.1151-1151
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    • 2001
  • The international coffee trade is conducted almost exclusively with green coffee. The main coffee producing countries include Brazil, Columbia, Indonesia, Mexico and the Ivory Coast. About 99 % of the coffee grown throughout the world belong to two coffee plant varieties that are commonly known as Arabica and Robusta. The quality of green coffee can be assessed according to several ISO standards (1,2,3,4,5). However, no official international standards for the authenticity of green coffee have been issued. It is important to know the country of origin of the coffee for the purposes of fair international trade. The geographic origin of the coffee is often stated on the label of coffee products such as speciality roasted and soluble coffees. Near Infrared Spectroscopy (NIR) is an accepted technique for quantitative analysis of various parameters in routine QC analysis of food products. It would appear to be a promising candidate as a tool for identification of green coffee origin and numerous feasibility studies have appeared in the literature on its use for soluble, roasted and green coffee variety identification as well as identification of arabica or robusta coffees. NIR spectrophotometers when configured in the reflectance mode are able to perform a complete profile of the NIR spectrum on whole beans. The data can then be interpreted by discriminant chemometrics data analysis. This is the approach used in the present study.

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Establishment of New Single Origin Plane Rectangular Coordinate System in Korea (한국의 새로운 단일원점 평면직각좌표계 설정)

  • Kim, Tae Woo;Yun, Hong Sik;Lee, Dong Ha;Kim, Gun Soo;Koh, Young Chang
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.31 no.3
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    • pp.183-192
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    • 2013
  • As a worldwide trend, the spatial information that is established by country, institution and purpose is integrated into the data with a single spatial reference to improve the data connectivity and usability. In this study, a new national single origin plane rectangular coordinate system was studied to efficiently respond to the changes in the spatial reference according to the introduction of a new national geodetic standard and to the demand of seamless data service in the spatial information sector. For this purpose, the Korean Peninsula was set as the projection region and the projection distortion in the projection region was analyzed. The projection parameters were defined to homogenize and minimize the projection distortion, and their standardization and registration on the international organizations were conducted. The study on the required optimal projection equation resulted in the Hooijberg projection equation and projection parameters (${\Phi}$, ${\lambda}$, K, N, E) resulted in $38^{\circ}N$ and $128^{\circ}E$ projection origin, and a scale factor of 0.99924. The proper false northing and easting were 700,000m N and 400,000m E, respectively, considering the introduction of country station index system.

Change Analysis of the Greenbelt Environment in the Region of Yellow Dust Origin Using Landsat Satellite Images (Landsat 위성영상을 이용한 황사발생 원인지역의 녹지 환경 변화 분석)

  • Lee, Jong-Sin;Park, Joon-Kyu;Yun, Hee-Cheon
    • Journal of the Korean Association of Geographic Information Studies
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    • v.17 no.4
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    • pp.1-9
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    • 2014
  • The interest group and corporation in Korea have cultivated Suaeda grass in the source area every year as a plan to prevent the yellow dust due to Chinese desertification. It needs the afforestation analysis about the research area to plan the greenbelt environment development in the region of yellow dust origin. Thus, this research analyzed the greenbelt environment based on Landsat 5 TM satellite image and Landsat 8 image to grasp and analyze the present of greenbelt environment development. And this research analyzed the inside of the salt desert to understand the detailed greenbelt environment and vegetation index. As a result, it represents that the afforestation was accomplished efficiently between 2009 and 2011, while the greenbelt area was decreased rapidly and bare soil was increased between 2011 and 2013. Through these results, we could recognize that it is in trouble about the greenbelt environment development after 2011 and it needs the project implementation using satellite image when the next afforestation project is planned henceforth.

Assessment on the Spatial Accessibility of Medical Institutions Providing National Gastric Cancer Screening Service using a geographic information system - Focused on the Area of Gangwon-do - (지리정보시스템을 이용한 국가 위암검진서비스 제공 의료기관에 대한 공간적 접근성 평가 - 강원도 지역을 중심으로 -)

  • Park, Young-Yong;Park, Ju-Hyun;Park, Yu-Hyun;Lee, Kwang-Soo
    • The Korean Journal of Health Service Management
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    • v.13 no.1
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    • pp.15-30
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    • 2019
  • Objectives: This study aimed to analyze people's accessibility to medical institutions providing national gastric cancer screening services in Gangwon-do using a geographic information system(GIS). Methods: To assess the spatial accessibility, network analysis was applied. Two types of network analysis-Service area analysis and origin-destination cost matrix(OD-cost matrix)-were applied to create network dataset. Results: The results of the analysis of the service area revealed that it took more than 60 minutes each to reach tertiary hospitals and general hospitals from 74.4% and 9.6% of Gangwon-do areas, respectively. Similarly, it took more than 60 minutes each to reach hospitals and clinics from 4.2% and 3.4% of Gangwon-do areas, respectively. The results of the OD-cost revealed that there were large regional variations in distance and time taken to reach the medical institutions. Conclusions: there were regional variations of spatial accessibility between Si and Gun in Gangwon-do.

Discrimination of Korean Domestic and Foreign Soybeans using Near Infrared Reflectance Spectroscopy (근적외선분광광도계(NIRS)를 이용한 국내산 콩과 수입콩의 판별분석)

  • Ahn, Hyung-Gyun;Kim, Yong-Ho
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.57 no.3
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    • pp.296-300
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    • 2012
  • Discrimination of geographic origin of agricultural products is a important issue in Korea because the price difference between Korean domestic and imported cereals is a key among some reasons. NIRS (Near Infrared Reflectance Spectroscopy) has been applied to classify the geographical origin of soybeans. Total 135 samples (Korean domestic 92 and foreign 43) were used to obtain calibration equation through 400~2,500 nm wavelength. The math treatment with 1st derivative and 4 nm gap and the modified partial least squares(MPLS)regression was outstanding for calibration equation. The standard error of calibration and determination coefficient in calibration set(n=115) was 6.65 and 0.98, respectively. And it showed that the extra 20 samples for validation equation were identified their authentication correctly. This study describes that the application of NIRS would be possible for discrimination of geographical origin between Korean domestic and imported soybeans.

Intracranial Germ Cell Tumor in the Molecular Era

  • Phi, Ji Hoon;Wang, Kyu-Chang;Kim, Seung-Ki
    • Journal of Korean Neurosurgical Society
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    • v.61 no.3
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    • pp.333-342
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    • 2018
  • Intracranial germ cell tumors (iGCTs) are a heterogeneous group of tumors with peculiar characteristics clearly distinguished from other brain tumors of neuroepithelial origin. Diverse histology, similarity to gonadal GCT, predilection to one sex, and geographic difference in incidence all present enigmas and fascinating challenges. The treatment of iGCT has advanced for germinoma to date; thus, clinical attention has shifted from survival to long-term quality of life. However, for non-germinomatous GCT, current protocols provide only modest improvement and more innovative therapies are needed. Recently, next-generation sequencing studies have revealed the genomic landscape of iGCT. Novel mutations in the KIT-RAS-MAPK and AKT-MTOR pathways were identified. More importantly, methylation profiling revealed a new method to assess the pathogenesis of iGCT. Molecular research will unleash new knowledge on the origin of iGCT and solve the many mysteries that have lingered on this peculiar neoplasm for a long time.

Variation of Crude Protein and Amino Acids Concentrations in Corn, Wheat, and Barley from Different Countries

  • An, Su Hyun;Kong, Changsu
    • Korean Journal of Poultry Science
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    • v.49 no.2
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    • pp.79-87
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    • 2022
  • The objective of this study was to investigate the variability in crude protein (CP) and amino acids (AA) content in cereal grains imported from different origins in Korea from 2006 to 2015. The values of CP and AA contents in corn, wheat, and barley were obtained from 430 and 325 samples from six countries, 83 and 56 samples from seven countries, and 60 and 58 samples from three countries, respectively. The CP concentrations in corn, wheat, and barley ranged from 7.12 (Brazil) to 7.68% (India), 10.55 (Ukraine) to 13.26% (Brazil), and 9.46 (India) to 10.49% (Ukraine), respectively. The Lys concentrations in the corn, wheat, and barley ranged from 0.18 (Argentina) to 0.24% (China), 0.26 (India) to 0.34% (China), and 0.23 (India) to 0.31% (Australia), respectively. The concentrations of CP and AA varied among different countries of origin (P<0.05), except for Met in wheat and CP in barley. The coefficients of variation for CP were 3.26, 9.06, and 5.36 from corn, wheat, and barley, respectively. The correlation coefficients (r) between CP and Lys concentrations in corn, wheat, and barley were positively correlated and were 0.322, 0.277, and 0.542, respectively. In conclusion, CP and AA concentrations varied not only from different countries of origins but also within the same country due to the geographic region in which they are produced.