• Title/Summary/Keyword: genetic correlations

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Estimation of Genetic Parameters for Economic Traits in Yorkshire (요크셔종에 대한 경제형질의 유전모수 추정)

  • Song, K.L.;Kim, B.W.;Kim, S.D.;Choi, C.S.;Kim, M.J.;Lee, J.G.
    • Journal of Animal Science and Technology
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    • v.44 no.5
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    • pp.499-506
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    • 2002
  • This study was conducted to estimate the heritabilities and genetic and phenotypic correlations among average daily gain, age at 90kg and backfat thickness in Yorkshire pigs. The data were obtained from 2,111 heads of Yorkshire tested at National Livestock Research Institute from May, 1994 to April, 2000. Genetic parameters were estimated with a multiple trait animal model by using DF-REML (Deri- vative-Free REstricted Maximum Likelihood). The results obtained are summarized as follows ; The means of traits studied were 0.871${\pm}$0.124 kg for average daily gain, 145.397${\pm}$11.718 days for age at 90kg and 1.476${\pm}$0.241 cm for backfat thickness. The estimated heritabilities were 0.55 for average daily gain, 0.56 for age at 90kg and 0.55 for backfat thickness. The genetic correlation of average daily gain with age at 90kg and backfat thickness were -0.82, 0.10, respectively. The genetic correlation of age at 90kg with backfat thickness was -0.25. The phenotypic correlations of average daily gain(ADG) with age at 90kg and backfat thickness and age at 90kg with backfat thickness were -0.77, 0.02 and -0.05 respectively. Though phenotypic correlation of ADG and age at 90kg was low, breeding project should be carefully considered by high genetic correlation. High heritabilities on all economic traits were obtained. Therefore, it is considered that suitable selection and management is needed successful improvement.

The Situation of Genetic Exchange in Duroc Breed and Impacts on Genetic Evaluation (국내 듀록의 종돈장간의 교류현황과 유전능력평가에 미치는 효과)

  • Seo, Jae-Ho;Shin, Ji-Seob;Noh, Jae-Kwang;Song, Chi-Eun;Do, Chang-Hee
    • Journal of Animal Science and Technology
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    • v.53 no.5
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    • pp.397-408
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    • 2011
  • The study was carried to identify the impact on nation-wide genetic evaluation and to obtain basic materials for the development of strategies in Swine Improvement Network Project (SINP). Data consisted of pedigree records of 235,511 and performance records of 70,747 for Duroc from 1987 to 2010 were collected by Korea Animal Improvement Association. Performance traits included three point back fat thickness (Shoulder, Belly, Waist), loin area, days to 90 kg and average daily gain. Exchange of genetic resources cross the breeding farms was not high, and furthermore the sizable farms which can accommodate genetic evaluation within the farm were scarce. Three data sets (individual farm evaluation: I, two sub-group evaluation: S, and whole eight farm evaluation: P) were used for genetic analysis. Genetic variances were larger in subordinate farms than in joiners farms for connectedness, and consequently the heritabilities were generally higher in subordinate farms than in joiner farms with I. The standard errors of heritability were small in the order of I, S and P. Estimated average inbreeding coefficients were 1.12%, 0.95% and 1.53% for joiner and subordinate group with S and population with P, respectively. The estimated correlations of breeding values with I and P were lowest. The correlations of breeding values with I and P for traits ranged 0.22 to 0.45 for moved parent animals and 0.24 to 0.72 for all animals. The results in the study suggest that nation-wide evaluation uses more pedigree information and improves accuracy. Furthermore SINP for connectedness could help to improve the accuracy of evaluation.

Estimation of Heritability and Genotypic Correlation through Diallel Corsses of the Silkworm, Bombyx mori L. (가잠 F1세대에 있어서 몇 가지 양적 형질에 대한 유전력 및 유전상관의 추정)

  • 정원복;장권열
    • Journal of Sericultural and Entomological Science
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    • v.28 no.2
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    • pp.21-27
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    • 1986
  • Since the estimate of the genetic relations between characters gave us effective basic informations about the selection of good strains of silkworm, the experiment was carried out to estimate the heritability and the genotypic correlation, etc. using the 21 combinations F1, 's by diallel crosses of seven strains of the silkworm. As the result of this experiment some conclusions obtained were as follows ; 1. The genotypic correlation is estimated highly positive in the heritability for all the 9 characters. 2. The correlations between all the characters are positive and the genotypic correlation is generally higher than the phenotypic one. 3. Since all the correlations between the have length and other characters are highly positive, it can be considered that the effects of the other characters on the have length are very important.

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Removing Non-informative Features by Robust Feature Wrapping Method for Microarray Gene Expression Data (유전자 알고리즘과 Feature Wrapping을 통한 마이크로어레이 데이타 중복 특징 소거법)

  • Lee, Jae-Sung;Kim, Dae-Won
    • Journal of KIISE:Software and Applications
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    • v.35 no.8
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    • pp.463-478
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    • 2008
  • Due to the high dimensional problem, typically machine learning algorithms have relied on feature selection techniques in order to perform effective classification in microarray gene expression datasets. However, the large number of features compared to the number of samples makes the task of feature selection computationally inprohibitive and prone to errors. One of traditional feature selection approach was feature filtering; measuring one gene per one step. Then feature filtering was an univariate approach that cannot validate multivariate correlations. In this paper, we proposed a function for measuring both class separability and correlations. With this approach, we solved the problem related to feature filtering approach.

Characterization of the Serotyping and the Plasmid Profile of E. coli Isolated from Foods and Clinical Specimens

  • Hyo-Shun Kwak;Chong-Sam Lee
    • Animal cells and systems
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    • v.3 no.4
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    • pp.399-405
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    • 1999
  • Characteristics of the food isolates and the clinical specimens isolates of E. coli harboring virulence factor and their correlations were analyzed. The predominant serogroup were 08 and 027 in the food isolates and 06 and 018 in the clinical isolates, respectively, showing the different patterns in serogrouping between them. In the test of antibiotic susceptibility, the food isolates were resistant to cephalothin, streptomycin, tetracycline and minocycline, and the clinical isolates were resistant to ampicillin, carbenicillin, streptomycin, cephalothin, trimethoprim/sulfamethoxazole, tetracyclino and minocycline, respectively. It shows that E.coli isolated from food sources and clinical specimens might be correlated. Plasmid profile in the food and clinical isolates showed wide diversity. Especially, large sized plasmid DNA such as 60 MDa, 90 MDa and 120 MDa were observed. The plasmid DNA (60 MDa) containing a gene encoding hemolysin was found in 43% of the food isolates and 35% of the clinical isolates. To study chromosomal homology, PFGE analysis was performed, showing different restriction patterns by Xbal. This result indicates that there were no genetic correlations between the foods and the clinical isolates.

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Analytic Study for Alcohol Consumption-related Parameters in 53 Heavy Drinkers (과음하는 성인남자 53 명의 음주패턴과 간 장애에 대한 분석 연구)

  • Hong, Sang-Hun;Cho, Jung-Hyo;Son, Chang-Gue
    • The Journal of Internal Korean Medicine
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    • v.28 no.1
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    • pp.115-123
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    • 2007
  • Objectives : To investigate the correlations among alcohol consumption, alcoholic liver disorders, physical symptoms, and behaviors in heavy drinkers. Methods : 53 males who self-realized their severe alcohol consumption were enrolled in this study. 10 answers for a questionnaire, serum parameter, sonographic finding and body mass index were attained. The correlations between them were analyzed using Pearson's correlation and Student's t-test. Results : The average consumption of alcohol in these subjects was 2.5-fold over social drinkers. The incidence of alcoholic hepatitis was around 30%, while fatty liver 73%, and abnormal GGT 77%, respectively. No specific correlation between average volume of daily alcoholic consumption and alcohol-related hepatic parameters was shown in this study, but correlative tendency between fatty liver and body mass index was exhibited. Conclusions : This study may indicate that alcoholic liver injuries are caused by not just volume of alcohol consumed but more mixed factors including inherited genetic components, body fat mass, foods and other physical or emotional stress.

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An Improved MAP-Elites Algorithm via Rotational Invariant Operator in Differential Evolution for Continuous Optimization (연속 최적화를 위한 개선된 MAP-Elites 알고리즘)

  • Tae Jong Choi
    • Smart Media Journal
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    • v.13 no.2
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    • pp.129-135
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    • 2024
  • In this paper, we propose a new approach that enhances the continuous optimization performance of the MAP-Elites algorithm. The existing self-referencing MAP-Elites algorithm employed the "DE/rand/1/bin" operator from the differential evolution algorithm, which, due to its lack of rotational invariance, led to a degradation in optimization performance when there were high correlations among variables. The proposed algorithm replaces the "DE/rand/1/bin" operator with the "DE/current-to-rand/1" operator. This operator, possessing rotational invariance, ensures robust performance even in cases where there are high correlations among variables. Experimental results confirm that the proposed algorithm performs better than the comparison algorithms.

Change in the Seed Characteristics and Germination Properties of Ulmus davidiana var. Japonica According to Seed Collection Time (채취 시기에 따른 느릅나무의 종자 형질 및 발아 특성 변화)

  • Tak, Woo Sik;Choi, Chung Ho;Kim, Tae Su
    • Journal of Korean Society of Forest Science
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    • v.95 no.3
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    • pp.316-322
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    • 2006
  • This study was conducted to examine the changes of seed characteristics and germination properties and to determine the most suitable collection time in Ulmus davidiana var. japonica. Seeds were collected six times with the interval of seven days after April 21, 2005 at Jeong-seon. There were differences in seed characteristics and germination properties among seed collection times. The sizes of seed and fruit increased with the collection time, but seed moisture contents decreased with the collection time after increasing until May 5. The 1,000 seeds weight decreased with the collection time after increasing until May 12. Collection time showed high positive correlations (r=0.790, p<0.01) with seed size and negative correlations (r=-0.919, p<0.01) with moisture contents. Percent germination (PG) presented the highest value in seeds collected at May 5, and decreased with the collection time. Mean germination time(MGT), germination speed(GS), and germination performance index(GPI) also showed the highest values in seeds collected at May 5. PG, MGT, and GS had correlations with other seed characteristics except the 1,000 seed weight. The relative growth rate of height and root collar diameter of seedlings presented the highest values in seedling germinated from seed collected at May 5, and seedlings germinated from seeds collected at May 5 and 12 showed the highest values in chlorophyll contents. Consequently it will be possible to product a number of seedlings when the seeds of U. davidiana var. japonica are collected just before drying morphologically.

A Consideration on the Lactation Persistency Evaluation in Korean Holstein Dairy Cattle (국내 홀스타인 젖소의 비유지속성 평가에 대한 고찰)

  • Cho, Kwang-Hyun;Yoon, Ho-Baek;Cho, Chung-Il;Min, Hong-Ryp;Lee, Joon-Ho;Kong, Hong-Sik;Lee, Hak-Kyo;Park, Kyung-Do
    • Journal of Animal Science and Technology
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    • v.55 no.3
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    • pp.173-178
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    • 2013
  • The characteristics of lactation persistency was investigated for new evaluation trait using 4,366,900 milk yield records from 436,690 heads of Korean Holstein dairy cattle. The average lactation persistencies of first parity, second parity and over third parity were 97.5%, 95.1% and 94.6%, respectively and there was a trend that after the peak yield, lactation persistency decreased collectively. The average days of peak milk yields after calving was about 50 days, but only 33.2% of cows reached peak yields at 36~66 days (second test day). Also, there was a difference between the milk yield of cows which reached peak yields at first test day by lactation days and that of cows which reached peak yields at second to fourth test day. The estimates of heritabilty and repeatability for mean lactation persistency were 0.16 and 0.35, respectively. The genetic correlation between cumulative lactation persistency from third to tenth test day and that from third to seventh test day was 0.91 and while it increased in later test day, it decreased sharply in earlier test day. The breeding value correlations of Data II and III for Data I were 0.80 and 0.72, respectively, while the rank correlations were 0.78 and 0.71, respectively. Based on the results, the breeding value and rank correlations decreased when more data were added.

STUDIES ON THE GENETIC ANALYSIS AMONG BURLEY, FLUE-CURED AND SUN-CURED TYPE TOBACCO 1. HETEROSIS, CORRELATION AND COMBINING ABILITY OF $F_1$ HYBRID (버어리종, 황색종, 양건종, 담배의 유전분석에 관한 연구 I. $F_1$의 잡종강세, 상관 및 조합능력)

  • 한철수
    • Journal of the Korean Society of Tobacco Science
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    • v.7 no.2
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    • pp.99-109
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    • 1985
  • The present studies were carried out to obtain some basic informations of the breeding of tobacco varieties. Genetically divergent 8 varieties, 3 flue-cured, 2 burley and 3 sun-cured tobaccos, were used in half diallel cross. In order to analyze the heterosis, combining abilities, modes of inheritance and correlations for some agronomic and chemical characters, 8 parents and 28 $F_1$ were tested. The results obtained were summarized as follows: The percentages of heterosis for stem diameter, internode length and total sugar content in $F_1$ hybrid were 3.6%, 3.1% and 10.6%, whereas these for days to flower, total alkaloids and leaves per plant were -6.3%, -6.9% and -5.0%, respectively. Yield had significant positive genotypic correlations with plant height, days to flower and leaf length, but negative with internode length and total sugar content. It also had significant prositive phenotypic correlations with plant height, days to flower, leaves per plant, leaf length, leaf width and leaf shape index (Leaf length/leaf width). General (GCA) and specific combining abilities (SCA) for all characters of $F_1$ hybrid were significant. The effects of GCA were positive on yield, plant height, stem diameter, leaves per plant and days to flower of Burley 21. And those were positive on yield, leaf shape index and plant height, but negative on leaves per plant and total nitrogen of Hicks. The effects of SCA for yield and leaves per plant were greater than those of others on the combinations of Coker 139 and Burley type, respectively.

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