• 제목/요약/키워드: fecal microbiome

검색결과 48건 처리시간 0.025초

Sows fed with synergistic blend of short- and medium chain organic acid has a carryover effect on post-weaning growth rate

  • Sampath, Vetriselvi;Park, Jae Hong;Pineda, Lane;Han, Yanming;Cho, Sungbo;Kim, In Ho
    • Journal of Animal Science and Technology
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    • 제64권2호
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    • pp.302-311
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    • 2022
  • This study investigated the effect of a synergistic blend of free and buffered organic acid (FMP) on the performance of piglets born to sows supplemented with a blend of short- and medium-chain organic acids (SGG) during the late gestation and lactation period. A total of 150 multiparous sows (n = 50/treatment, Landrace × Yorkshire) were blocked (2.4 parity) and assigned to 1 of 3 dietary treatments: CON - corn-soybean meal-based basal diet, SGG-Low - CON+ 1.5 kg/ton SGG, and SGG-High - CON + 3kg/ton SGG. During weaning, 600 piglets (6.72 ± 0.5kg) which weaned from sows supplemented with 3 levels of SGG were allocated to 2 weaner diets (Control and FMP - 3kg/ton) following 3 × 2 factorial arrangement. Supplemental effects on performance were measured at d0-d21 and d 21-42, and the entire period. Pigs fed with FMP and born to sows supplemented with SGG-High gained more weight and ate more (p < 0.05) compared with those in the CON group in both phases, and with SGG-Low in the second phase. Over the entire post-weaning period, piglets born to sows supplemented with SGG-Low and SGG-High had a higher average daily gain (ADG) and body weight (BW) (p < 0.05). Regardless of sow treatment, pigs fed with an FMP diet had higher ADG (p < 0.001), BW (p = 0.045), and a lower feed conversion ratio (p = 0.033). Also, feeding FMP diets reduced the fecal Escherichia coli and Clostridium perfringens counts at d42. The current study indicates that sows fed SGG supplement had a positive carry-over effect on the post-weaning growth rate, and FMP supplement enhances the growth performance and reduced the number of C. perfringens and E. coli. Thus, the application of 3 kg/ton of SGG in sows' diet and subsequent feeding of piglets with FMP would be an effective strategy to improve growth rate and reduce pathogenic bacteria in post-weaned piglets.

Effects of husbandry systems and Chinese indigenous chicken strain on cecum microbial diversity

  • Dong, Xiuxue;Hu, Bing;Wan, Wenlong;Gong, Yanzhang;Feng, Yanping
    • Asian-Australasian Journal of Animal Sciences
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    • 제33권10호
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    • pp.1610-1616
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    • 2020
  • Objective: This study was to evaluate the effect of husbandry systems and strains on cecum microbial diversity of Jingyang chickens under the same dietary conditions. Methods: A total of 320 laying hens (body weight, 1.70±0.15 kg; 47 weeks old) were randomly allocated to one of the four treatments: i) Silver-feathered hens in enrichment cages (SEC) with an individual cage (70×60×75 cm), ii) Silver-feathered hens in free range (SFR) with the stocking density of 1.5 chickens per ten square meters, iii) Gold-feathered hens in enrichment cages (GEC), iv) Gold-feathered hens in free range (GFR). The experiment lasted 8 weeks and the cecum fecal samples were collected for 16S rDNA high throughput sequencing at the end of experiment. Results: i) The core microbiota was composed of Bacteroidetes (49% to 60%), Firmicutes (21% to 32%) and Proteobacteria (2% to 4%) at the phylum level. ii) The core bacteria were Bacteroides (26% to 31%), Rikenellaceae (9% to 16%), Parabacteroides (2% to 5%) and Lachnoclostridium (2% to 6%) at the genus level. iii) The indexes of operational taxonomic unit, Shannon, Simpson and observed species were all higher in SFR group than in SEC group while in GEC group than in GFR group, with SFR group showing the greatest diversity of cecum microorganisms among the four groups. iv) The clustering result was consistent with the strain classification, with a similar composition of cecum bacteria in the two strains of laying hens. Conclusion: The core microbiota were not altered by husbandry systems or strains. The free-range system increased the diversity of cecal microbes only for silver feathered hens. However, the cecum microbial composition was similar in two strain treatments under the same dietary conditions.

Profiling of endogenous metabolites and changes in intestinal microbiota distribution after GEN-001 (Lactococcus lactis) administration

  • Min-Gul Kim;Suin Kim;Ji-Young Jeon;Seol Ju Moon;Yong-Geun Kwak;Joo Young Na;SeungHwan Lee;Kyung-Mi Park;Hyo-Jin Kim;Sang-Min Lee;Seo-Yeon Choi;Kwang-Hee Shin
    • The Korean Journal of Physiology and Pharmacology
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    • 제28권2호
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    • pp.153-164
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    • 2024
  • This study aimed to identify metabolic biomarkers and investigate changes in intestinal microbiota in the feces of healthy participants following administration of Lactococcus lactis GEN-001. GEN-001 is a single-strain L. lactis strain isolated from the gut of a healthy human volunteer. The study was conducted as a parallel, randomized, phase 1, open design trial. Twenty healthy Korean males were divided into five groups according to the GEN-001 dosage and dietary control. Groups A, B, C, and D1 received 1, 3, 6, and 9 GEN-001 capsules (1 × 1011 colony forming units), respectively, without dietary adjustment, whereas group D2 received 9 GEN-001 capsules with dietary adjustment. All groups received a single dose. Fecal samples were collected 2 days before GEN-001 administration to 7 days after for untargeted metabolomics and gut microbial metagenomic analyses; blood samples were collected simultaneously for immunogenicity analysis. Levels of phenylalanine, tyrosine, cholic acid, deoxycholic acid, and tryptophan were significantly increased at 5-6 days after GEN-001 administration when compared with predose levels. Compared with predose, the relative abundance (%) of Parabacteroides and Alistipes significantly decreased, whereas that of Lactobacillus and Lactococcus increased; Lactobacillus and tryptophan levels were negatively correlated. A single administration of GEN-001 shifted the gut microbiota in healthy volunteers to a more balanced state as evidenced by an increased abundance of beneficial bacteria, including Lactobacillus, and higher levels of the metabolites that have immunogenic properties.

국내에서 사육되는 Holstein 젖소과 Jersey 젖소의 대변 미생물 분석 : 비교연구 (Fecal Microbiota Profiling of Holstein and Jersey, in South Korea : A Comparative Study)

  • 하광수;서지원;양희건;박세원;이수영;박영경;이란희;정도연;양희종
    • 생명과학회지
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    • 제33권7호
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    • pp.565-573
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    • 2023
  • 숙주 동물과 동물의 장내 미생물의 건강 또는 생산성에 대한 연구결과를 미루어 볼 때, 가축 동물의 장내 미생물에 대한 연구는 매우 중요하다. 본 연구는 국내에서 사육되는 젖소 중 홀스타인 종과 저지종 젖소의 장내 미생물을 분석하고 차세대 염기서열 분석을 통해 젖소 종에 따른 장내 미생물 군집 구조의 차이를 규명하고자 하였다. 젖소의 원유 생산과 관련있는 것으로 알려진 종 풍부도와 종 다양성 지수 분석 결과 대부분의 풍부도 및 다양성 지수가 홀스타인 종 보다 저지 종에서 유의한 수준으로 높은 것으로 나타났으나, 종 간의 계통학적 거리를 합산하여 산출되는 phylogenetic diversity 지수는 낮은 것으로 나타났다. 미생물 분포 분석 결과 홀스타인과 저지 종의 두 집단 장내 미생물 군집 구조가 다른 것으로 나타났다. 두 종의 젖소에서 과(family) 수준의 다양한 장내 미생물간의 분포에 상관관계가 있는 것으로 나타났으며, 특히 저지 종의 장내 미생물은 다양한 미생물 분포 사이에 매우 유의한 수준의 상관관계가 있는 것으로 나타났다. 두 종의 젖소 장내 미생물 구조에 차이가 있는지 확인하기 위해 beta-diversity 분석을 수행하였으며, PCoA 분석과 UPGMA clustering 분석 결과 두 그룹의 cluster가 명확히 분리되는 것을 시각적으로 확인하였으며, PERMANOVA 분석 결과 두 종의 장내 미생물 군집 구조가 통계적으로 매우 유의한 수준의 차이가 있는 것으로 나타났다. 두 젖소 종의 장내 미생물 군집 구조 차이에 기여하는 미생물을 확인하기 위해 LEfSe 분석을 수행하였으며, 그 결과 Firmicutes, Bacilli, Moraxellaceae, Pseudomonadales 등의 상대적인 미생물 분포 차이가 두 그룹간 장내 미생물 군집 구조 차이에 가장 큰 영향을 미치는 것으로 나타났다.

차세대염기서열 분석을 이용한 소, 돼지, 닭의 장내 미생물 군집 분석 및 비교 (Comparative Analysis of Gut Microbiota among Broiler Chickens, Pigs, and Cattle through Next-generation Sequencing)

  • 정호진;하광수;신수진;정수지;류명선;양희종;정도연
    • 생명과학회지
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    • 제31권12호
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    • pp.1079-1087
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    • 2021
  • 본 연구는 국내 가축의 장내 미생물 군집 분포와 시료간 미생물학적 차이에 대하여 차세대 염기서열 분석법(NGS)을 이용하여 분석하였다. 전국의 축사에서 닭, 돼지, 소의 분변시료를 무작위로 채집하여 α-diversity를 분석한 결과, 종 추정치와 종 풍부도가 세 종류의 가축 모두에서 통계학적 유의성을 가지면서 소, 돼지, 닭 순으로 높게 분석되었다. 그러나 조류에 속하는 닭과 포유류에 속하는 돼지, 소에 대한 각 사이의 종 다양성은 통계학적 유의성이 있는 것으로 분석되었으나, 돼지와 소의 사이의 종 다양성은 통계학적 유의성이 없는 것으로 분석되었다. 각 가축 내 장내 미생물 군집의 분포를 분석한 결과, 문 수준에서 세 종류의 가축 모두 Firmicutes가 우점한 것으로 나타났으며, 속 수준에서는 닭의 분변시료는 Weissella, 돼지의 분변시료는 Prevotella, 소의 분변시료는 Acinetobacter가 우점 속으로 나타났다. 각 가축 분변시료의 미생물 군집 분포에 차이가 있는지 분석하기 위해 PERMANOVA 분석을 수행한 결과, 닭, 돼지, 소의 분변시료 내 미생물 군집의 중심과 산포는 통계학적으로 유의성을 가진 것으로 나타났다. 또한 각 가축 분변시료의 미생물 군집을 대표하는 biomarker를 분석하기 위해 LEfSe 분석을 수행한 결과, Weissella와 Lactobacillus는 닭의 분변을 다른 두 가축과 구분할 수 있는 미생물로, Preveotella는 돼지의 분변을 다른 두 가축과 구분할 수 있는 미생물로, Acinetobacter는 소의 분변을 다른 두 가축과 구분할 수 있는 미생물로 분석되었다. 본 연구를 기반으로 축사 여건에 적합한 체증 관련 미생물의 탐색, 생애주기별 장내 미생물 군집과 유전체 분석 및 각 가축에 특화된 생균제 개발 등 추가적인 연구 진행에 필요한 미생물학적 기초자료로 활용할 수 있을 것으로 기대된다.

초기 육계 사료 내 미세조류(Tetradesmus sp.) 첨가에 따른 장관환경 변화 (Supplementation of Microalgae (Tetradesmus sp.) to Pre-Starter Diet for Broiler Chickens)

  • 임채윤;정희수;안수현;주상석;김지훈;공창수;김명후
    • 한국가금학회지
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    • 제49권2호
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    • pp.125-137
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    • 2022
  • This study aimed to determine the effects of dietary microalgae (Tetradesmus sp. (TO)) on intestinal immunity and microbiota of pre-starter broilers. One hundred and twenty 1-day-old birds (Ross 308) were allocated to two dietary treatment groups with six blocks in a randomized complete block design. The two experimental diets consisted of a corn-soybean meal-based basal diet and a diet with 0.5% TO powder instead of cornstarch in the basal diet. After feeding the experimental diets for ten days, all birds' body weight and feed intake were measured, and representative eight birds were selected from each treatment group. Small intestinal lamina propria cells were isolated using flow cytometry to examine the frequency of immune cells. Cecal feces were harvested for 16s rRNA gut microbiota analysis and fecal IgA levels. Here, we found that 0.5% TO supplementation increased CD3+CD4+ T cells in the small intestine, but decreased CD3+CD8+ T cells in the small intestine. Gut microbial analysis showed that TO supplementation significantly increased the alpha diversity of the gut microbiome. Taxonomic analysis showed that TO treatment increased the abundance of Firmicutes and decreased that of Bacteroidetes at the phylum level. The distribution of Enterobacteriaceae containing many harmful bacteria at the family level, was lower in the TO group. In the LEfSe analysis, the TO group had a significantly enriched abundance of Agathobaculum at the genus level. Overall, results show that Tetradesmus sp. supplementation influences intestinal T-cell immunity and induces the expansion of beneficial gut microbes in pre-starter broiler chickens.

고지방식이로 유도된 대사증후군 모델 동물에서 백호가인삼탕(白虎加人參湯)의 장내미생물 및 유전자 발현 조절을 통한 대사 개선 효과 (The Effect of Baekhogainsam-tang on Metabolism through Modulation of the Gut Microbiota and Gene Expression in High-Fat Diet Induced Metabolic Syndrome Animal Model)

  • 조민진;한송이;임수경;송은지;남영도;김호준
    • 한방재활의학과학회지
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    • 제33권3호
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    • pp.1-15
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    • 2023
  • Objectives We aimed to find out the improvement effect of Baekhogainsam-tang (Baihu Jia Renshen-tang, BIT) on metabolic syndrome and alteration of microbiota and gene expression. Methods We used male C57BI/6 mice and randomly assigned them into three groups. Normal control group was fed 10% kcal% fat diet, high-fat diet (HFD) group was fed 45% kcal% fat diet and 10% fructose water. BIT group was fed same diet as HFD group and treated by BIT for once daily, 6 days per week, total 8 weeks. We measured their body weight and food intake every week and performed oral glucose tolerance test 1 week before the end of the study. Then we collected the blood sample to measure triglyceride, total cholesterol, high-density lipoprotein cholesterol, insulin, and hemoglobin A1c. We harvested tissue of liver, muscle, fat, and large intestine for quantitative polymerase chain reaction (qPCR) and histopathological examination. Fresh fecal samples were collected from each animal to verify alterations of gut microbiota and we used RNA from liver tissue for microarray analysis. Results The body weight and fat weight of BIT group were reduced compared to HFD group. The qPCR markers usually up-regulated in metabolic syndrome were decreased in BIT group. Bacteroides were higher in BIT group than other groups. There were also differences in gene expressions between two groups such as Cyp3a11 and Scd1. Conclusions We could find out BIT can ameliorate metabolic syndrome and suggest its effect is related to gut microbiota composition and gene expression pattern.

Effects of different levels of organic chromium and selenomethionine cocktails in broilers

  • Jaewoo An;Younggwang Kim;Minho Song;Jungseok Choi;Hanjin Oh;Seyeon Chang;Dongcheol Song;Hyunah Cho;Sehyun Park;Kyeongho Jeon;Yunhwan Park;Gyutae Park;Sehyuk Oh;Yuna Kim;Nayoung Choi;Jongchun Kim;Hyeunbum Kim;Jinho Cho
    • Journal of Animal Science and Technology
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    • 제65권6호
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    • pp.1226-1241
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    • 2023
  • Selenium (Se) is an essential trace mineral that plays an important role in physiological processes by regulating the antioxidant defense system and enhancing immunity. Chromium is an essential mineral involved in carbohydrate and lipid metabolism and also plays a role in maintaining normal insulin function. Based on these advantages, we hypothesized that the addition of selenomethionine (SeMet) and organic chromium (OC) to broiler diets would increase Se deposition, antioxidant capacity and immune response in meat. Therefore, this study analyzed the effects of OC and SeMet on growh performance, nutrients digestibility, blood profiles, intestinal morphology, meat quality characteristics, and taxonomic analysis of broilers. A total of 168 one-day-old broiler chicken (Arbor Acres) were randomly allotted to 3 groups based on the initial body weight of 37.33 ± 0.24 g with 7 replicate per 8 birds (mixed sex). The experiments period was 28 days. Dietary treatments were folloewd: Basal diets based on corn-soybean meal (CON), basal diet supplemented with 0.2 ppm OC and 0.2 ppm SeMet (CS4), and basal diet supplemented with 0.4 ppm OC and 0.4 ppm SeMet (CS8). Supplementation of OC and SeMet did not affect on growth performance, nutrient digestibility. However, CS8 supplementation increased in duodenum villus height and villus height : crypt depth, and increased in breast meat Se deposition. In addition, CS8 group showed higher uric acid and total antioxidant status than CON group. Taxonomic analysis at phylum level revealed that Proteobacteria and Firmicutes of CS4 and CS8 were lower than CON group. In genus level, the relative abundance of fecal Lactobacillus and Enterococcus of CS4 and CS8 groups were higher than CON group. In short, 0.4 ppm OC and 0.4 ppm SeMet supplementation to broiler diet supporitng positive gut microbiome change, also enhancing antioxidant capacity, and Se deposition in breast meat.