• Journal of Plant Biotechnology
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• 제7권1호
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• pp.67-74
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• 2005

To overcome various disadvantages of conventional cul-ture vessels for micropropagation, a novel disposable vessel, the 'Vitron', made of a multi-layered $OTP^{(R)}$ film and supported by a polypropylene frame, was developed. The film possesses superior properties such as: high light transmittance, low water vapor transmittance and thermal stability and in particular, high gas-permeability. Single nodal explants, which were excised from the multiple shoots derived from shoot-tip culture, were cultured in Vitron and polycarbonate vessels on $3\%$ sugar-containing agar on MS medium and placed at 3000 ppm $CO_2$-enrichment at a low photosynthetic photon flux density (PPFD) ($45{\mu}mol\;m^{-2}\;s^{-1}$). The in vitro and ex vitro growth, and the net photosynthetic rate of in vitro and ex vitro plantlets were significantly enhanced in the Vitron compared to those cultured in a polycarbonate vessel. Explants that were cultured on the same MS medium under low PPFD at various $CO_2$ concentrations were also cultured at 3000 ppm $CO_2$- enrichment at various PPFD: 30, 45, 60, 75 and $90{\mu}mol\;m^{-2}\;s^{-1}$. The best in vitro and ex vitro growth obtained for 3000 ppm $CO_2$-enrichment at $75{\mu}mol\;m^{-2}\;s^{-1}$ PPFD. The novel Vitron vessel, when placed under the two conditions, may replace conventional culture vessels for the successful micropropagation of sweetpotato.

• 신재생에너지
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• 제5권2호
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• pp.15-24
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• 2009

As new small scale LFG (landfill gas) energy project model which can improve economic feasibility limited due to the economy of scale, LFG-Microturbine combined heat and power system with $CO_2$ fertilization into greenhouses was proposed and investigated including basic design process prior to the system installation at Gwang-ju metro sanitary landfill. The system features $CH_4$ enrichment for stable microturbine operation, reduction of compressor power consumption and low CO emission, and $CO_2$ supplement into greenhouse for enhancement plant growth. From many other researches, high $CO_2$ concentration was found to enhance $CO_2$ assimilation (also known as photosynthesis reaction) which converts $CO_2$ and $H_2O$ to sugar using light energy. For small scale landfills which produce LFG under $3\;m^3$/min, among currently available prime movers, microturbine is the most suitable power generation system and its low electric efficiency can be improved with heat recovery. Besides, since its exhaust gas contains very low level of harmful contaminants to plant growth such as NOx, CO and SOx, microturbine exhaust gas is a suitable and economically advantageous $CO_2$ source for $CO_2$ fertilization in greenhouse. The LFG-Microturbine combined heat and power generation system with $CO_2$ fertilization into greenhouse gas to enhance plant growth is technologically and economically feasible and improves economical feasibility compared to other small scale LFG energy project model.

• Asian Pacific Journal of Cancer Prevention
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• 제13권12호
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• pp.6375-6378
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• 2012

Background: Small-cell lung cancer (also known as SCLC) is an aggressive form and untreated patients generally die within about 3 months. To obtain further insight into mechanism underlying malignancy with this cancer, an miRNA synergistic regulatory network was constructed and analyzed in the present study. Method: A miRNA microarray dataset was downloaded from the NCBI GEO database (GSE27435). A total of 546 miRNAs were identified to be expressed in SCLC cells. Then a miRNA synergistic network was constructed, and the included miRNAs mapped to the network. Topology analysis was also performed to analyze the properties of the synergistic network. Consequently, we could identified constitutive modules. Further, common target genes of each module were identified with CFinder. Finally, enrichment analysis was performed for target genes. Results: In this study, a miRNA synergistic network with 464 miRNAs and 2981 edges was constructed. According to the topology analysis, the topological properties between the networks constructed by LC related miRNAs and LC unrelated miRNAs were significantly different. Moreover, a module cilque0 could be identified in our network using CFinder. The module included three miRNAs (hsa-let-7c, hsa-let-7b and hsa-let-7d). In addition, several genes were found which were predicted to be common targets of cilque0. The enrichment analysis demonstrated that these target genes were enriched in MAPK signaling pathways. Conclusions: Although limitations exist in the current data, the results uncovered here are important for understanding the key roles of miRNAs in SCLC. However, further validation is required since our results were based on microarray data derived from a small sample size.

• Asian Pacific Journal of Cancer Prevention
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• 제13권8호
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• pp.3741-3745
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• 2012

Background: Hepatocellular carcinoma (HCC) is the sixth most common cancer worldwide and the most common form of liver cancer. However, while it is associated frequently with hepatitis C virus (HCV) there is only an elementary understanding of its molecular pathogenesis. Methods: To gain insight into the molecular mechanisms of HCV-induced hepatocarcinogenesis, we performed microarray analysis on 75 surgical liver samples from 48 HCV-infected patients. Results: There were 395 differentially expressed geness between cirrhotic samples and HCC samples. Of these, 125 genes were up-regulated and 270 genes were down-regulated. We performed pathway enrichment analysis and screened as described previously. Conclusions: The differentially expressed genes might be involved in hepatocarcinogenesis through upregulating the pathways of ECM-receptor interaction, focal adhesion, cell adhesion molecules and other cancer-related pathways, and downregulating the pathways of "complement and coagulation cascades". We hope our results could aid in seeking of therapeutic targets for HCV-induced hepatocellular carcinoma.

• Asian-Australasian Journal of Animal Sciences
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• 제27권3호
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• pp.324-329
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• 2014

To facilitate the construction of genetically-modified pigs, we produced cloned embryos derived from porcine fibroblasts transfected with a pair of engineered zinc finger nuclease (ZFN) plasmids to create targeted mutations and enriched using a reporter plasmid system. The reporter expresses RFP and eGFP simultaneously when ZFN-mediated site-specific mutations occur. Thus, double positive cells ($RFP^+/eGFP^+$) were selected and used for somatic cell nuclear transfer. Two types of reporter based enrichment systems were used in this study; the cloned embryos derived from cells enriched using a magnetic sorting-based system showed better developmental competence than did those derived from cells enriched by flow cytometry. Mutated sequences, such as insertions, deletions, or substitutions, together with the wild-type sequence, were found in the cloned porcine blastocysts. Therefore, genetic mutations can be achieved in cloned porcine embryos reconstructed with ZFN-treated cells that were enriched by a reporter-based system.

• 한국수산과학회지
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• 제50권6호
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• pp.777-787
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• 2017

Organic enrichment and pollution was investigated in surface sediments from Jinhae Bay and Geoje-Hansan Bay of Korea, which contain the largest oyster farms in Korean coastal areas. Geochemical indicators (chemical oxygen demand, total organic carbon, ignition loss, and acid volatile sulfide) in sediments, ammonium and nitrate in pore water, and bioluminescence inhibition test for sediment extracts were analyzed. Temporal changes of organic enrichment were also investigated using sediment core samples from Geoje-Hansan Bay. The level of organic pollution in sediments from Jinhae Bay was significantly greater than that of sediments from Geoje-Hansan Bay. Compared with other sites, Jinhae Bay was one of the most polluted coastal areas of Korea. The levels of geochemical indicators in May were comparable to, or higher than, in August. Ammonium concentrations in pore water were two orders of magnitudes greater than the nitrate concentrations, suggesting that the bays are reducing environments. The concentrations of total organic carbon in core sediment samples from shellfish-farming areas increased significantly from 2000 to the present year, and it seems to be associated with increases in anthropogenic activities.

• 한국미생물·생명공학회지
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• 제16권4호
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• pp.270-274
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• 1988

우리나라 연근해역의 해양오염중 주종을 이루는 Bunker-C유를 대상으로 부산 및 충무, 울산항구의 해수를 균원으로 접종하여 enrichment culture시켰다. 이와 같은 혼합배양 해양세균들의 plasmid DNA분포를 agarose gel 전기영동상에서 조사하여 보았다. 우선 오염되지 않은 해수로부터 분리한 세균들의 Plasmid 분포(22%)와 만성적으로 유류오염이 예상되는 각 항구의 세균 plasmid 분포(25%)에는 조금 차이는 있었으며 enrichment culture중에는 29%정도로서 plasmid 분포비율이 증가하였다. 각종 탄화수소 화합물들에 성장하는 세균중 약33%는 plasmid룰 함유하고 있었으며, 또 약 62%정도는 Gram 음성균이었다. Plasmid 함유 세균중 23% 정도는 2종 이상의 plasmid를 갖고 있으며, 41%의 plasmid는 20kb 이상의 크기를 가지고 있는 것으로 나타났다.

• The Plant Pathology Journal
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• 제29권3호
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• pp.249-259
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• 2013

Burkholderia glumae causes rice grain rot and sheath rot by producing toxoflavin, the expression of which is regulated by quorum sensing (QS). The QS systems of B. glumae rely on N-octanoyl homoserine lactone, synthesized by TofI and its cognate receptor TofR, to activate the genes for toxoflavin biosynthesis and an IclR-type transcriptional regulator gene, qsmR. To understand genome-wide transcriptional profiling of QS signaling, we employed RNAseq of the wild-type B. glumae BGR1 with QS-defective mutant, BGS2 (BGR1 tofI::${\Omega}$) and QS-dependent transcriptional regulator mutant, BGS9 (BGR1 qsmR::${\Omega}$). A comparison of gene expression profiling among the wild-type BGR1 and the two mutants before and after QS onset as well as gene ontology (GO) enrichment analysis from differential expressed genes (DEGs) revealed that genes involved in motility were highly enriched in TofI-dependent DEGs, whereas genes for transport and DNA polymerase were highly enriched in QsmR-dependent DEGs. Further, a combination of pathways with these DEGs and phenotype analysis of mutants pointed to a couple of metabolic processes, which are dependent on QS in B. glumae, that were directly or indirectly related with bacterial motility. The consistency of observed bacterial phenotypes with GOs or metabolic pathways in QS-regulated genes implied that integration RNAseq with GO enrichment or pathways would be useful to study bacterial physiology and phenotypes.

• 자원환경지질
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• 제29권4호
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• pp.495-508
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• 1996

This study had three purposes: (1) to investigate dispersion and enrichment level of potentially toxic elements; (2) to identify uranium-bearing minerals in black shales; and (3) to assess the chemical speciation of heavy metals in soils and sediments. Rock, surface soil and stream sediment samples were collected in the Chungjoo area covered with black shales in Korea. These samples were analyzed for multi-elements using INAA and ICP-AES. The maximum abundance of U in black shales is 56 ppm and radioactivity counts up to 240CPM. Molybdenum, V, Ba, Cu, and Pb are enriched in black shales and most of soils show high concentrations of U, Mo, Ba, Cu, Pb and Zn. Concentrations of potentially toxic elements decrease in the order of mountain soil > farmland soil > paddy soil. Enrichment index of soils and sediments are calculated and higher than 1.0 in the black shale area with the highest value of 6.1. In order to identify U-bearing minerals, electron probe micro analysis was applied, and uraninite and brannerite in black shale were found. Uraninite grains are closely associated with monazite or pyrite with the size of $2{\mu}m$ to $10{\mu}m$ in diameter whereas brannerite occurs as $50{\mu}m$ euhedral grains. With the results of sequential extraction scheme, residual fractions of Cu, Pb and Zn in soils are mainly derived from weathering of black shale but Cu, Pb and Zn in sediments are present as non-residual fractions. Lead is predominantly present as oxidizable phase in soils whereas Zn is in exchageable/water-acid soluble phase in sediments.

• 한국수소및신에너지학회논문집
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• 제12권3호
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• pp.169-176
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• 2001

The purpose of study is to obtain low-emission and high-efficiency in LPG engine with hydrogen enrichment. The test engine was named heavy-duty variable compression ratio single cylinder engine (VCSCE). The fuel supply system provides LPG/hydrogen mixtures based on same heating value. Various sensors such as crank shaft position sensor (CPS) and hall sensor supply spark timing data to ignition controller. Displacement of VCSCE is $1858.2cm^3$. VCSCE was runned 1400rpm with compression ratio 8. Spark timing was set MBT without knocking. Relative air-fuel ratio(${\lambda}$) of this work was varied between 0.76 and 1.5. As a result, i) Maximum thermal efficiency occurred at ${\lambda}$ value 1.0. It was shown that thermal efficiency was increased approximately 5% with hydrogen enrichment at same ${\lambda}$ value. ii) Engine-out carbon monoxide (CO) emissions were decreased at a great rate under LPG/hydrogen mixture fuelling. iii) Total hydrocarbon (THC) emission was much exhausted in rich zone, same as CO. But THC was exhausted a little bit more in lean zone. iv) Finally, engine-out oxides of nitrogen (NOx) was increased with ${\lambda}$ value 1.0 zone at a greater rate with hydrogen enrichment due to high adiabatic flame temperature.