• Title/Summary/Keyword: endangered fish species

Search Result 146, Processing Time 0.025 seconds

The Complete Mitochondrial Genome and Molecular Phylogeny of the Flathead Platycephalus cultellatus Richardson, 1846 from Vietnam (Teleostei; Scorpaeniformes) (베트남 Platycephalus cultellatus Richardson, 1846 (Teleostei; Scorpaeniformes)의 전장 미토콘드리아 유전체와 분자계통)

  • Tran, Biet Thanh;Nguyen, Tu Van;Choi, Youn Hee;Kim, Keun-Yong;Heo, Jung Soo;Kim, Keun-Sik;Ryu, Jung-Hwa;Kim, Kyeong Mi;Yoon, Moongeun
    • Korean Journal of Ichthyology
    • /
    • v.33 no.4
    • /
    • pp.217-225
    • /
    • 2021
  • The family Platycephalidae is a taxonomic group of economically important demersal flathead fishes that predominantly occupy tropical or temperate estuaries and coastal environments of the Indo-Pacific oceans and the Mediterranean Sea. In this study, we for the first time analyzed the complete mitochondrial genome (mitogenome) of the flathead Platycephalus cultellatus Richardson, 1846 from Vietnam by Next Generation Sequencing method. Its mitogenome was 16,641 bp in total length, comprising 13 protein-coding genes (PCGs), two ribosomal RNA genes, and 22 transfer RNA genes. The gene composition and order of the mitogenome were identical to those of typical vertebrates. The phylogenetic trees were reconstructed based on the concatenated nucleotide sequence matrix of 13 PCGs and the partial sequence of a DNA barcoding marker, cox1 in order to determine its molecular phylogenetic position among the order Scorpaeniformes. The phylogenetic result revealed that P. cultellatus formed a monophyletic group with species belonging to the same family and consistently clustered with one nominal species, P. indicus, and two Platycephalus sp. specimens. Besides, the cox1 tree confirmed the taxonomic validity of our specimen by forming a monophyletic clade with its conspecific specimens. The mitogenome of P. cultellatus analyzed in this study will contribute valuable information for further study on taxonomy and phylogeny of flatheads.

Fish Farm Monitoring and Growth Performances of Chinese Muddy Loach (Misgurnus mizolepis) under Indoor or Outdoor Aquaculture Conditions, Korea (실내외 양식환경에 따른 미꾸라지(Misgurnus mizolepis) 양식장 모니터링과 성장특성)

  • Choi, Bok Ki;Choe, Jong Ryeol;Lee, Jeong-Ho;Park, Jong Sung;Kim, Jung Eun;Hwang, Ju-ae;Kim, Hyeong Su
    • Korean Journal of Ichthyology
    • /
    • v.32 no.4
    • /
    • pp.232-238
    • /
    • 2020
  • The objective of the present study was to investigate fish farm and growth performances of Chinese muddy loach (Misgurnus mizolepis) under indoor and outdoor aquaculture conditions for the domestic loach aquaculture industry. The investigation was conducted from August 2017 to October 2019 at one indoor farm (D-site) and two outdoor farms (P1-site and P2-site). Results showed that WG (weight gain), DWG (daily weight gain), and SWG (specific weight gain) based on growth measurements were 175.27±36.2%, 7.98±3.3%, and 0.94±0.2% at D-site, 320±34%, 4.07±0.6%, and 0.55±0.1% at P1-site, and 295.9±53%, 4.15±0.5%, and 0.62±0.1% at P2-site, respectively. WG was higher in outdoor farms (P1-site and P2-site), while DWG and SWG were higher in the indoor farm (D-site). Such differences of the present study might be due to differences in growth, water quality, plant and sale frequency depending on aquaculture types. In particular, outdoor farms takes more than a year to have sales whereas indoor farms can have sales three times in a year.

Study on physical habitat suitability of Gobiobotia naktongensis in Naeseong Stream according to change of bed grain size (내성천 하상 입경 변화에 따른 흰수마자의 물리 서식 적합도 분석)

  • Lee, Dong Yeol;Park, Jae Hyun;Baek, Kyong Oh
    • Journal of Korea Water Resources Association
    • /
    • v.56 no.9
    • /
    • pp.553-562
    • /
    • 2023
  • The Gobiobotia naktongensis is a species endemic to Korea, and it has recently been designated as a class I endangered species of freshwater fish. Naeseong Stream, one of the tributaries of the Nakdong River, where the Gobiobotia naktongensis was first discovered, provided an optimal habitat for the Gobiobotia naktongensis in the past with fine sand beds and riffle. Currently, due to the construction of Yeongju Dam and the excessive dredging of river channels by the local government, the riverbed armoring in the downstream area of the dam is undergoing rapid changes, and as a result, the habitat environment of the Gobiobotia naktongensis is deteriorating. In this study, the variations of the habitat suitability of the Gobiobotia naktongensis due to the change in the riverbed grain size of the Naeseong Stream were analyzed based on the WUA (weight usable area) using the physical habitat model, River2D. The study domain is the reach from Seoktap Bridge to Hoeryong Bridge downstream of Yeongju Dam. The change in riverbed grain size was analyzed using D50 acquired in 2010 and 2020, respectively. The substrate grain size of Naeseong Stream in 2020 was thicker than that in 2010, and the riverbed coarsening phenomenon was evident overall. As a result of the River2D analysis, the area in which the Gobiobotia naktongensis could inhabit was only about 0.75% in 2010 compared to the entire area of the flow, and even this decreased to 0.55% in 2020 due to riverbed armoring.

Gene Structure and Altered mRNA Expression of Metallothionein in Response to Metal Exposure and Thermal Stress in Miho Spine Loach Cobitis choii (Cobitidae; Cypriniformes) (미호종개 metallothionein 유전자의 구조 및 중금속 노출과 고온 자극에 대한 MT mRNA의 발현 특징 분석)

  • Lee, Sang-Yoon;Nam, Yoon-Kwon
    • Korean Journal of Ichthyology
    • /
    • v.23 no.1
    • /
    • pp.61-69
    • /
    • 2011
  • Gene and promoter structures of metallothionein(MT) from Miho spine loach (Cobitis choii; Cypriniformes) were characterized, and the transcriptional responses to experimental exposures to heavy metals and heat stress were examined. The C. choii metallothionein displayed well-conserved features of teleostean metallothioneins at gDNA, mRNA and amino acid levels. Bioinformatic analysis predicted that the C. choii MT regulatory region potentially possessed various motifs or elements targeted by various transcription factors associated with metal-coordinating regulation (e.g., metal transcription factor-1), immune responses (e.g., nuclear factor kappa B), and thermal modulations (e.g., heat shock factor). Acute heavy-metal exposures to 0.5 or $1.0\;{\mu}M$ of cadmium (Cd), copper (Cu), manganese (Mn), nickel (Ni) or zinc (Zn) showed that MT transcription was significantly stimulated by Cd (9.6-fold relative to non-exposed control) and Cu (10.4-fold), only moderately by Mn (2.4-fold), but hardly by Ni and Zn. Elevation of water temperature from $25^{\circ}C$ to $31^{\circ}C$ caused a rapid modulation of MT mRNAs toward upregulation to 9.5-fold; however, afterward the elevated mRNA level slightly decreased during further incubation at $31^{\circ}C$ for 6 h. Results from this study suggest that MT-based expression assay could be a useful basis for better understanding the metal- and/or heat-caused stresses in this endangered fish species.

Reproductive Characteristics of Rhodeus pseudosericeus (Pisces: Acheilognathinae) in the Heukcheon, Namhangang (River), Korea (남한강 수계 흑천에 서식하는 한강납줄개 Rhodeus pseudosericeus (Pisces: Acheilognathinae)의 산란 특성)

  • Kim, Hyeong Su;Yoon, Jeong Do;Yang, Hyun;Choi, Hye-Sung;Lee, Jeong-Ho
    • Korean Journal of Ichthyology
    • /
    • v.29 no.4
    • /
    • pp.235-243
    • /
    • 2017
  • Reproductive characteristics of Rhodeus pseudosericeus (Pisces: Acheilognathinae) was investigated at the Heukcheon (River), Yangpyeong-gun, Gyeonggi-do, Korea from January to July in 2012. This fish prefers heavily vegetated stagnant pool with Phragmites japonica and Salix koreensis and area with high proportions of sand and mud. The standard length of the population indicated that 13~22 mm group is 0-year old, 30~45 mm group is 1-year old, 45~55 mm group is 2-year old and 45~70 mm group is more than 3-year old (June in 2012). The sex ratio of female to male was 1 : 0.80. The spawning season was from March to June with water temperatures in the range $11.0{\sim}26.2^{\circ}C$. The embryos were found with no egg mass in Unio douglasiae sinuolatus and the number of those was 1~22 ($5.8{\pm}5.51$). The number of the embryos found in each of the four parts of the mussel gill was 1~9 ($2.7{\pm}2.16$) in left outer, 1~2 ($1.5{\pm}0.71$) in left outer, 1~5 ($1.8{\pm}1.79$) in left outer and 1~22 ($5.8{\pm}5.51$) in left outer.