• 제목/요약/키워드: diversity of science

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Genome-Wide SSR 마커를 이용한 주요 산지별 참당귀의 유전다양성 분석 (Genetic Diversity of Angelica gigas Nakai Collected in Korea using Genome-Wide SSR Markers)

  • 정대희;박윤미;김기윤;박홍우;전권석;김만조;길진수;이이;엄유리
    • 한국약용작물학회지
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    • 제27권6호
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    • pp.376-382
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    • 2019
  • Background: Angelica gigas Nakai has been used as an herbal medicine in Eastern Asia for treating disorders in women for a long time. To date there are no studies on the genetic diversity of A. gigas. The present study aimed to study the genetic diversity of A. gigas variants using genome-wide simple sequence repeat (SSR) markers. Methods and Results: The genetic diversity of 199 variants of A. gigas cultivated in of different regions, was analyzed using 5 genome-wide SSR markers. The results revealed that the genetic variants were very diverse, and genetic analysis using the 5 SSR markers revealed high diversity among the variants. Conclusions: It is expected that the development of the true Angleical cultivar, by studying the system and group selection, can be achieved by genetic analysis using the developed markers, for generating a genetically fixed lineage and group selection.

On the Capacities of Spectrum-Sharing Systems with Transmit Diversity

  • Asaduzzaman, Asaduzzaman;Kong, Hyung-Yun
    • Journal of electromagnetic engineering and science
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    • 제10권3호
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    • pp.99-103
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    • 2010
  • Motivated by recent works on spectrum-sharing systems, this paper investigates the effects of transmit diversity on the peak interference power limited cognitive radio(CR) networks. In particular, we derive the ergodic and outage capacities of a spectrum-sharing system with multiple transmit-antennas. To derive the capacities, peak interference power constraint is imposed to protect the primary receiver. In a CR transmitter and receiver pair with multiple antennas at the transmitter side, the allowable transmit power is distributed over the transmit-antennas to achieve transmit diversity at the receiver. We investigate the effect of this power distribution when a peak interference power constraint is imposed to protect the primary receiver. We show that the transmit diversity does not improve the ergodic capacity compared to the single-antenna system. On the other hand, the transmit diversity significantly improves the outage capacity. For example, two transmit-antennas improve the outage capacity 10 times compared to the single-antenna with a 0 dB interference constraint.

Performance Analysis of Transmit Diversity in Multiuser Data Networks With Fading Correlation

  • Zhang, Kai;Niu, Zhisheng
    • Journal of Communications and Networks
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    • 제10권4호
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    • pp.444-450
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    • 2008
  • This paper studies the performance of multiuser data networks with transmit diversity under correlated fading channels. Previous work shows that correlated fading reduces the link performance of multiple antenna systems, but how correlated fading affects the throughput of multiuser data networks is still unknown since the throughput depends not only on the link performance but also on the multiuser diversity. We derive the throughput of the multiuser data networks with various transmit diversity schemes under correlated fading channels. The impact of correlated fading on the throughput is investigated. Analytical and simulation results show that, although correlated fading is harmful for link performance, it increases the throughput of the multiuser data networks if the transmit scheme is appropriately selected.

Genetic diversity and population structure of Chinese ginseng accessions using SSR markers

  • An, Hyejin;Park, Jong-Hyun;Hong, Chi Eun;Raveendar, Sebastin;Lee, Yi;Jo, Ick-Hyun;Chung, Jong-Wook
    • Journal of Plant Biotechnology
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    • 제44권3호
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    • pp.312-319
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    • 2017
  • The need to preserve and use plant genetic resources is widely recognized, and the prospect of dwindling plant genetic diversity, coupled with increased demands on these resources, has made them a topic of global discussion. In the present study, the genetic diversity and population structure of 73 ginseng accessions collected from six regions in China were analyzed using eight simple sequence repeat (SSR) markers. Major allele frequencies ranged between 0.38 ~ 0.78, with a mean allele frequency value of 0.571. The number of alleles discovered ranged from 3 to 10 per accession, with a mean number of 7; 56 alleles were discovered in total. Gene diversity (GD) and polymorphic information content (PIC) values were similar to each other, and they ranged from 0.36 ~ 0.77 (mean 0.588) and 0.33 ~ 0.74 (mean 0.548), respectively. Accessions were divided into three clusters based on their phylogenetic relationships and genetic similarities, and although the populations were similar, they were not classified according to the region. Regional genetic diversity was also similar, with slight differences observed based on the number of accessions per region. It is expected that the findings of the present study can provide basic data for future studies on ginseng genetic diversity and for breeding ginseng cultivars.

The Circular Polarization Diversity Effect Considering XPD Factor in an Indoor Radio Propagation Environment

  • Ahn Je-Sung;Ha Deock-Ho;Cho Pyung-Dong
    • Journal of electromagnetic engineering and science
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    • 제6권1호
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    • pp.24-29
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    • 2006
  • In this paper, we analyzed new two-branch polarization diversity at the receiving end of a mobile link which a transmitter emits circularly polarized wave. To analyze the correlation coefficient considered by XPD(Cross Polarization Discrimination) between the two received signals, a simple theoretical model of circular polarization diversity is adopted and experimental measurements are also conducted. From both theoretical and measurement results, it can be seen that the proposed circular polarization diversity scheme is more effective than that of the conventional linear polarization diversity.

RAPD에 의한 층층나무의 유전적 다양성과 집단구조 (Genetic Diversity and Population Structure of Comus controversa Hemsley Using RAPD)

  • 문성기;허만규
    • 생명과학회지
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    • 제18권2호
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    • pp.175-179
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    • 2008
  • Cornus controversa is a long-lived woody species mostly distributed in East Asia. Random amplified polymorphic DNA (RAPD) markers were used to investigate the genetic diversity and population structure of Korean populations of this species. A high level of genetic variation was found in seven populations of C. controversa. The mean genetic diversity (H) was 0.222 across populations, varying from 0.200 to 0.238. Eighty of the 93 loci (86.0%) showed detectable polymorphism in at least one population. Total genetic diversity values ($H_T$) varied between 0.192 and 0.231, giving an average overall polymorphic loci of 0.212. The interlocus variation of genetic diversity within populations ($H_S$) was high (0.167). Mean of genetic diversity in C. controversa was higher than average values for species with similar life history traits. The sexual reproduction, perennial habitat, and longevity are proposed as possible factors contributing to high genetic diversity. On a per locus basis, the proportion of total genetic variation due to differences among populations ($G_{ST}$) ranged from 0.169 to 0.278 with a mean of 0.216, indicating that about 21.6% of the total genetic variation was among populations. An indirect estimate of the number of migrants per generation (Nm=1.893) indicated that gene flow was extensive among Korean populations of C. controversa.

Effect of Population Reduction on mtDNA Diversity and Demographic History of Korean Cattle Populations

  • Dadi, Hailu;Lee, Seung-Hwan;Jung, Kyoung-Sup;Choi, Jae-Won;Ko, Moon-Suck;Han, Young-Joon;Kim, Jong-Joo;Kim, Kwan-Suk
    • Asian-Australasian Journal of Animal Sciences
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    • 제25권9호
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    • pp.1223-1228
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    • 2012
  • The population sizes of three Korean indigenous cattle populations have been drastically reduced over the past decades. In this study, we examined the extent to which reduction in populations influenced genetic diversity, population structure and demographic history using complete mitochondrial DNA (mtDNA) control region sequences. The complete mtDNA control region was sequenced in 56 individuals from Korean Black (KB), Jeju Black (JEB) and Korean Brindle (BRI) cattle populations. We included 27 mtDNA sequences of Korean Brown (BRO) from the GenBank database. Haplotype diversity estimate for the total population was high (0.870) while nucleotide diversity was low (0.004). The KB showed considerably low nucleotide (${\pi}$ = 0.001) and haplotype (h = 0.368) diversities. Analysis of molecular variance revealed a low level of genetic differentiation but this was highly significant (p<0.001) among the cattle populations. Of the total genetic diversity, 7.6% was attributable to among cattle populations diversity and the rest (92.4%) to differences within populations. The mismatch distribution analysis and neutrality tests revealed that KB population was in genetic equilibrium or decline. Indeed, unless an appropriate breeding management practice is developed, inbreeding and genetic drift will further impoverish genetic diversity of these cattle populations. Rational breed development and conservation strategy is needed to safeguard these cattle population.

Genetic Variability Comparison of Wild and Cultured Far Eastern Catfish (Silurus asotus) of Korea using Microsatellite Marker

  • Kim, Jung Eun;Hwang, Ju-Ae;Kim, Hyeong Su;Lee, Jeong-Ho
    • 한국발생생물학회지:발생과생식
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    • 제24권4호
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    • pp.317-325
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    • 2020
  • The Far Eastern catfish (Silurus asotus) is an important commercial freshwater fish in Korea. Investigation of the genetic diversity of wild and cultured domestic catfish groups is essential for the restoration of fishery resources and for increasing local revenue. However, there are relatively few genetic diversity studies on wild and cultured catfish in Korea. In the present study, we analyzed the genetic diversity and association of wild and cultured catfish using five microsatellite markers. We determined that the number of alleles per locus (NA) ranged from 9 to 25, wherein the Jeonbuk catfish demonstrated the highest mean number of alleles per locus and the cultured catfish exhibited the lowest. The average expected heterozygosity (He) of the wild catfish samples was 0.907, and that of the cultured catfish showed was 0.875. The genetic distances (GD value) among populations of all catfish ranged from 0.138 to 0.242. Jeonnam and Jeonbuk wild catfish were located closest to each other, and the cultured group was separated from the other groups. In conclusion, the present study confirmed that the genetic diversity of wild and cultured catfish was maintained at a high level. In the case of the wild group, it is effective in maintaining diversity due to the continuous fry release by the local fish research institute. However, the genetic diversity of cultured catfish declined. Low diversity is associated with slow growth and weakened immunity, and therefore continuous monitoring is necessary.

A Study on Polarization Diversity for the Next Generation Mobile Radio Communications

  • Jung, Hee-Chang;Park, Seung-Keun;Ha, Deock-Ho
    • Journal of Electrical Engineering and information Science
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    • 제3권1호
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    • pp.117-125
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    • 1998
  • In this paper, in order to investigate the fading reduction effect of narrowband and broadband signals in an indoor multipath propagation environment, both the received narrowband signal while a vehicle unit in motion and the frequency sweeped broadband signal received by vertical polarized antenna, horizontal polarized antenna and circularly polarized antenna are analyzed. Specifically, in order to evaluate polarization diversity effect, we examined the difference of fading reduction effect between the polarization diversity reception and the space diversity reception. Using the correlation coefficient and correlation graph for the polarization diversity branches, the diversity effect is evaluated. And also, using the cumulative distribution for the received signal strength simulated by diversity reception, the diversity effect is also estimated. From the evaluation results it was found that the polarization diversity which use a circularly polarized antenna at the transmitting end and the vertical and horizontal polarized antenna branches at the receiving end is markedly excellent.

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베타다양성 개념의 적용을 통한 청계천 어류 군집 특성 분석 (Application of Beta Diversity to Analysis the Fish Community Structure in Stream)

  • 김동환;이완옥;홍양기;전형주;김경환;강혜진;송미영
    • 생태와환경
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    • 제52권3호
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    • pp.274-283
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    • 2019
  • 청계천에 서식하는 어류 군집의 공간적 변이와 환경과의 관계를 측정하기 위해, 청계천 내 6개 지점을 대상으로 2년간(2014~2015년) 이화학적 요인, 서식처 환경, 어류 군집을 조사하였다. 어류 군집의 공간적 변이는 지점-종 군집 데이터 메트릭스를 기반으로 한 베타다양성 분석을 통해 정량적으로 제시하였다. 또한 청계천 내 전체 군집 변이 값(베타다양성)과 함께 각각의 지점이 청계천 전체 베타다양도에 기여하는 값 (LCBD, Local Contribution to Beta Diversity)도 계산하였다. 데이터 분석의 기반이 되는 지점-종 군집 데이터 테이블은 출현-비출현, 풍부도, 헤링거 변환 값의 세 가지 형태로 적용하였고, 해당 데이터 형태에 따른 베타다양성과 지점별 변이 영향을 각각 계산하여 비교하였다. 헤링거 변환을 통해 계산된 베타다양성 값은 출현-비출현 정보나 풍부도를 바탕으로 한 분석보다 큰 값을 보여주어 공간적 변이를 가장 잘 보여주는 것으로 나타났다. 각 지점별 군집 변이 기여도(LCBD)는 출현-비출현 정보와 해링거 변환을 통한 분석이 유사한 경향을 보여주었다. 자료의 정규성을 가지기 어려운 어류 군집 자료의 경우 풍부도를 이용한 공간 변이 분석은 적절하지 않은 것으로 판단된다. 추가적으로 다양한 환경 요인 및 군집 지수와 베타다양성 기여도 값의 관계를 상관분석을 통해 나타내었다. 해당 지점의 알파다양성 지수와 베타다양성 기여도가 높은 음의 상관관계를 보였고 이는 선행 연구와 유사한 결과이다. 본 연구에 적용한 방법은 매트릭스 형태의 자료를 대상으로 베타다양성 계산과 지점별 군집 변이 기여도를 수치화하는 데 유용한 것으로 나타났다.