• Title/Summary/Keyword: dicA

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H-NS binding on dicA promoter DNA inhibits dicA gene expression (dicA promoter DNA에 붙는 H-NS 단백질에 의한 dicA 유전자의 발현 조절)

  • Yun, Sang Hoon;Lee, Yonho;Lim, Heon M.
    • Korean Journal of Microbiology
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    • v.55 no.3
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    • pp.191-198
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    • 2019
  • H-NS binds to promoter DNA and works as a general transcription silencer. DicA protein, by binding to the promoter DNA of dicA, activates dicA expression and at the same time inhibits expression of dicF and dicB, thus, exerting cell division control in Escherichia coli. H-NS complexed with a nucleoid protein Cnu was known to be involved in dicA expression. However, the exact nature of H-NS binding to dicA promoter DNA and the consequences of H-NS binding in expression of dicA is not clear. In this study, we explored the DNA binding activity of H-NS on the promoter DNA of dicA and found that H-NS binding occurs exclusively to the dicA promoter DNA. We never observed, however, H-NS binding at the vicinity of the dicA promoter. Temperature dependent oligomerization of H-NS was observed during DNA binding and the Cnu protein enhances the oligomerization process of H-NS binding. In vivo measurement of dicA expression in an hns deleted strain showed that dicA expression increased. These results demonstrated that H-NS binds specifically to dicA promoter DNA and functions as a transcription silencer.

Temperature-dependent DNA binding of DicA protein in vivo and in vitro (In vivo와 in vitro에서 DicA 단백질의 온도 의존적 DNA 결합)

  • Lee, Yonho;Yun, Sang Hoon;Lim, Heon M.
    • Korean Journal of Microbiology
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    • v.55 no.3
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    • pp.181-190
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    • 2019
  • In Escherichia coli, DicA protein is involved in cell division control. DicA protein is known to bind DNA better at $25^{\circ}C$ than at $37^{\circ}C$. However, the molecular cause of the temperature dependent binding is not clear. In this study, we investigated how DicA binds DNA and why its DNA binding activity depends on temperature. An unique in vivo DNA binding assay developed in this laboratory showed that unlike the homologous proteins such as RovA or SlyA, DicA uses its N-terminal domain for DNA binding. The in vivo DNA binding assay of DicA also demonstrated that the temperature-dependent DNA binding activity does not come from Cnu or H-NS that is known to bind DNA better at $25^{\circ}C$ than at $37^{\circ}C$. Electrophoretic Mobility Shift Assay (EMSA), when performed with purified DicA protein, did not show temperature-dependent DicA binding activity. However when EMSA was performed with crude protein from WT E. coli cells, temperature-dependent DicA binding activity was observed, suggesting that there is a factor(s) that confers temperature DNA binding activity of DicA in vivo.

Dihydroartemisinine Enhances Dictamnine-induced Apoptosis via a Caspase Dependent Pathway in Human Lung Adenocarcinoma A549 Cells

  • An, Fu-Fei;Liu, Yuan-Chong;Zhang, Wei-Wei;Liang, Lei
    • Asian Pacific Journal of Cancer Prevention
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    • v.14 no.10
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    • pp.5895-5900
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    • 2013
  • Dictamnine (Dic) has the ability to exert cytotoxicity in human cervix, colon, and oral carcinoma cells and dihydroartemisinin (DHA) also has potent anticancer activity on various tumour cell lines. This report explores the molecular mechanisms by which Dic treatment and combination treatment with DHA and Dic cause apoptosis in human lung adenocarcinoma A549 cells. Dic treatment induced concentration- and time-dependent cell death. FCM analysis showed that Dic induced S phase cell cycle arrest at low concentration and cell apoptosis at high concentration in which loss of mitochondrial membrane potential (${\Delta}{\Psi}m$) was not involved. In addition, inhibition of caspase-3 using the specific inhibitor, z-DQMD-fmk, did not attenuate Dic-induced apoptosis, implying that Dic-induced caspase-3-independent apoptosis. Combination treatment with DHA and Dic dramatically increased the apoptotic cell death compared to Dic alone. Interestingly, pretreatment with z-DQMD-fmk significantly attenuated DHA and Dic co-induced apoptosis, implying that caspase-3 plays an important role in Dic and DHA co-induced cell apoptosis. Collectively, we found that Dic induced S phase cell cycle arrest at low concentration and cell apoptosis at high concentration in which mitochondria and caspase were not involved and DHA enhanced Dic induced A549 cell apoptosis via a caspase-dependent pathway.

Tensile and fracture characterization using a simplified digital image correlation test set-up

  • Kumar, Abhishek;Vishnuvardhan, S.;Murthy, A. Ramachandra;Raghava, G.
    • Structural Engineering and Mechanics
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    • v.69 no.4
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    • pp.467-477
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    • 2019
  • Digital image correlation (DIC) is now a popular and extensively used full-field metrology technique. In general, DIC is performed by using a turnkey solution offered by various manufacturers of DIC. In this paper, a simple and economical set-up for DIC is proposed which uses easily accessible digital single-lens reflex (DSLR) camera rather than industrial couple-charged device (CCD) cameras. The paper gives a description of aspects of carrying a DIC experiment which includes experimental set-up, specimen preparation, image acquisition and analysis. The details provided here will be helpful to carry DIC experiments without specialized DIC testing rig. To validate the responses obtained from proposed DIC set-up, tension and fatigue tests on specimens made of IS 2062 Gr. E300 steel are determined. Tensile parameters for a flat specimen and stress intensity factor for an eccentrically-loaded single edge notch tension specimen are evaluated from results of DIC experiment. Results obtained from proposed DIC experiments are compared with those obtained from conventional methods and are found to be in close agreement. It is also noted that the high resolution of DSLR allows the use of proposed approach for fracture characterization which could not be carried out with a typical turnkey DIC solution employing a camera of 2MP resolution.

A Study of the Strain Measurement for Al 6061-T6 Tensile Specimen using the Digital Image Correlation (디지털 이미지 상관관계를 이용한 Al 6061-T6 인장시험편의 변형률 측정에 관한 연구)

  • Kwon, Oh Heon;Kim, Sang Tae;Kang, Ji Woong
    • Journal of the Korean Society of Safety
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    • v.28 no.4
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    • pp.26-32
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    • 2013
  • A digital image correlation(DIC) method is a whole-field measurement technique that acquires surface displacements and strains from images information which characterized a random speckle as intensity grey levels. Recently years, this DIC method is being developed and used increasingly in various research. In this study, we tried to apply to aluminum alloy(Al 6061-T6) using DIC method and strain gauge. DIC results demonstrated the usefulness and ability to determine a strain. The test specimen used in this study was an aluminum alloy(Al 6061-T6, thickness 1 mm). For a strain measurement, a strain gauge was attached at the center of a specimen. A specimen was lightly sprayed with a white paint and a black dot pattern was sprayed on its fully dried white surface to obtain a random speckle. The experimental apparatus used to perform the tensile test consisted of universal dynamic tester(5 kN; T.O. Co.) under displacement speed of 0.5, 1.0 and 3.0 mm/min. A Model 5100 B Scanner(V. Co.) used to obtain a strain. A CCD camera connected to a PC uses to record the images of the specimen surface. After acquisition, the images were transferred to PC where the DIC software was implemented. An acquired image was evaluated by the DIC program. DIC method for displacement and strain was suggests and it results show a good consistent remarkably. DIC results demonstrated the usefulness and ability to determine surface strain was better than by using classical measurements. The strain field measurement using a DIC is so useful that it can be applied to map strain distributions at a full area. DIC method can evaluate a strain change so it can predict a location of fracture. The findings of the investigation suggest that the DIC method is an efficient and reliable tool for full-field monitoring and detailed damage characterization of materials.

UV-curable liquid crystal for a retarder

  • Hasebe, Hiroshi;Kuwana, Yasuhiro;Nakata, Hidetoshi;Nishiyama, Isa;Takeuchi, Kiyofumi;Takatsu, Haruyoshi
    • 한국정보디스플레이학회:학술대회논문집
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    • 2009.10a
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    • pp.159-162
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    • 2009
  • A liquid crystalline monomer is applicable to fabricate a retarder in which various types of alignment are fixed. We have developed the monomer, UV-curable liquid crystal optimized for coating processes. Applications and materials for the retarder are reviewed.

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Design and Verification of 3D Digital Image Correlation Systems for Measurement of Large Object Displacement Using Stereo Camera (대면적 대상물 변위계측을 위한 스테레오 카메라 3차원 DIC 시스템 기초설계 및 검증에 관한 연구)

  • Ko, Younghun;Seo, Seunghwan;Lim, Hyunsung;Jin, Tailie;Chung, Moonkyung
    • Explosives and Blasting
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    • v.38 no.2
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    • pp.1-12
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    • 2020
  • Digital Image Correlation is a well-established method for displacements, strains and shape measurements of engineering objects. Stereo-camera 3D Digital Image Correlation (3D-DIC) systems have been developed to match the specific requirements for measurements posed by material and mechanical industries. Although DIC method provides the capabilities of scaling a field-of-view(FOV), dimensions of Geotechnical structure objects in many cases are too big to be measured with DIC based on a single camera pair. It can be the most important issue with applying 3D DIC to the measurement of Geotechnical structures. In this paper, We were present stereo vision conditions in a 3D DIC system that can be measured for large FOV(30×20m) and high precisions(z-displacement 0.5mm) of the ground objects with Stereo-camera DIC systems.

Stable Carbon Isotope Signature of Dissolved Inorganic Carbon (DIC) in Two Streams with Contrasting Watershed Environments: A Potential Indicator for Assessing Stream Ecosystem Health

  • Kim, Chulgoo;Choi, Jong-Yun;Choi, Byungwoong;Lee, JunSeok;Jeon, Yonglak;Yi, Taewoo
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.2 no.4
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    • pp.259-273
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    • 2021
  • We conducted a study to investigate the characteristics of the carbon cycle of two streams (located in Shig a Prefecture, Japan), having similar size, namely, the Adokawa stream (length: 52 km, area: 305 km2, watershed population: 8,000) and the Yasukawa stream (length: 62 km, area: 380 km2, watershed population: 120,000), but with different degree of human activity. Samples were collected from these two streams at 14 (Adokawa stream) and 23 (Yasukawa stream) stations in the flowing direction. The dissolved inorganic carbon (DIC) concentration and the stable carbon isotope ratio of DIC (δ13C-DIC) were measured in addition to the watershed features and the chemical variables of the stream water. The δ13C-DIC (-9.50 ± 2.54‰), DIC concentration (249 ± 76 µM), and electric conductivity (52 ± 13 µS/cm) in Adokawa stream showed small variations from upstream to downstream. However, the δ13C-DIC (-8.68 ± 2.3‰) upstream of Yasukawa stream was similar to that of Adokawa stream and decreased downstream (-12.13 ± 0.43‰). DIC concentration (upstream: 272 ± 89 µM, downstream: 690 ± 37 µM) and electric conductivity (upstream: 69 ± 17 µS/cm, downstream: 193 ± 37 µS/cm) were higher downstream than upstream of Yasukawa stream. The DIC concentration of Yasukawa stream was significantly correlated with watershed environmental variables, such as, watershed population density (r = 0.8581, p<0.0001, n = 23), and forest area percentage of the watershed (r = -0.9188, p<0.0001, n = 23). δ13C-DIC showed significant negative correlation with the DIC concentration (r = -0.7734, p<0.0001, n = 23), electric conductivity (r = -0.5396, p = 0.0079, n = 23), and watershed population density (r = -0.6836, p = 0.0003, n = 23). Our approach using a stable carbon isotope ratio suggests that DIC concentration and δ13C-DIC could be used as indicators for monitoring the health of stream ecosystems with different watershed characteristics.

Thermal Deformation Measurement of Notched Structure Using Global-local Multi-DIC System (전역-국부 다중 DIC 시스템을 이용한 노치 구조물의 열변형 계측)

  • Xin, Ruihai;Doan, Nguyen Vu;Goo, Nam Seo
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.49 no.8
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    • pp.617-626
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    • 2021
  • During supersonic flight of vehicles, the thermal behavior of structures under high-temperature environment is important for thermal-structural design. In this study, full-field thermal deformation and stress concentration of the notched structure was performed using global-local multi-digital image correlation (multi-DIC) systems. This techniques were developed and implemented by multi-DIC systems consists of 2D DIC system and 3D DIC system. The specimen was heated in a heating chamber to achieve the thermal expansion behavior. Then the images of structure's deformation and stress concentration at various temperature were recorded and analyzed by multi-DIC system. Afterward, full-field thermal deformation of the notched structure was determined with DIC technique and stress concentration at the notched structure was calculated by further processing. Finite element analysis of the notched structure is performed in ABAQUSTM and the results of the experiments show good agreement with those obtained from simulation. The results achieved in this study show the efficiency of the muilti-DIC method in thermal deformation as well as stress concentration of notched structure.

Microwave Irradiation and Diisopropylcarbodiimide (DIC)/7-Aza-1-hydroxybenzotriazole (HOAt): A Potent Combination for Synthesis of Variuos Hydrazide from N-Protected Amino Acid and Hydrazine (마이크로웨이브 조사와 Diisopropylcarbodiimide (DIC)/7-Aza-1-hydroxybenzotriazole (HOAt): N-Protected Amino Acid와 Hydrazine으로부터 다양한 Hydrazide합성을 위한 반응조건)

  • Albatal, Mona;Ghani, Mohamad Abdul;El-Faham, Ayman;Al-Hazimi, Hassan M.;Hammud, Hassan H.
    • Journal of the Korean Chemical Society
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    • v.54 no.4
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    • pp.419-428
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    • 2010
  • Here we describe a fast and rapid technique for preparation of amino acid hydrazide as well as peptide hydrazide derivatives using diisopropylcarbodiimide (DIC)/1-hydroxybenzotriazoles (HOXt) (X = A or B) under microwave irradiation employing a multimode reactor (Synthos 3000 Aton Paar, GmbH, 1400 W maximum magnetron). A comparison between conventional and microwave irradiation was described. The microwave methodology is rapid, convenient, proceeds under mild conditions. Diisopropylcarbodiimide (DIC)/7-aza-1-hydroxybenzotriazole (HOAt) always gave much better yield (95 - 98%) and purity than diisopropylcarbodiimide (DIC)/1-hydroxybenzotriazole (HOBt).