• Title/Summary/Keyword: cross-correlation coefficient

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Fragment based QSAR Analysis of CXCR-2 Inhibitors Using Topomer CoMFA Approach

  • Thirumurthy, M
    • Journal of Integrative Natural Science
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    • v.10 no.4
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    • pp.209-215
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    • 2017
  • CXC chemokine receptor 2 (CXCR2) is a prominent chemokine receptor on neutrophils. CXCR2 antagonist may reduce the neutrophil chemotaxis and alter the inflammatory response because the neutrophilic inflammation in the lung diseases is found to be largely regulated through CXCR2 receptor. Hence, in the present study, Topomer based Comparative Molecular Field Analysis (Topomer CoMFA) was performed on a series of CXCR2 antagonist named pyrimidine-5-carbonitrile-6-alkyl derivatives. The best Topomer COMFA model was obtained with significant cross-validated correlation coefficient ($q^2$ = 0.487) and non cross-validated correlation coefficients ($r^2$ = 0.980). The model was evaluated with six external test compounds and its $r^2{_{pred}}$ was found to be 0.616. The steric and electrostatic contribution map show that presence of bulkier and electropositive group around cyclopropyl ring may contribute more for improving the biological activities of these compounds. The generated Topomer CoMFA model could be helpful for future design of novel and structurally related CXCR2 antagonists.

Topomer CoMFA Analysis of Xanthine Oxidase inhibitors

  • Santhosh Kumar, N
    • Journal of Integrative Natural Science
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    • v.10 no.4
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    • pp.192-196
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    • 2017
  • Xanthine Oxidase is an enzyme, which oxidizes hypoxanthine to xanthine, and xanthine to uric acid. It is widely distributed throughout various organs including the liver, gut, lungs, kidney, heart, brain and plasma. It is involved in gout pathogenesis. Hence, in the present study, topomer based Comparative Molecular Field Analysis (topomer CoMFA) was performed on a series of Xanthine oxidase antagonist named 2-(indol-5-yl) thiazole derivatives. The best topomer CoMFA model was obtained with significant cross-validated correlation coefficient ($q^2$ = 0.572) and non cross-validated correlation coefficients ($r^2$ = 0.937). The model was evaluated with six external test compounds and its $r^2{_{pred}}$ was found to be 0.553. The steric and electrostatic contribution map show that presence of bulky and electropositive group in indole thiazole ring is necessary for improving the biological activities of the compounds. The generated topomer CoMFA model could be helpful for future design of novel and structurally related xanthine oxidase antagonists.

Muscle Strength and Biochemical Markers as Predictors of Depression in Hemodialysis Patients: A Cross-Sectional Study

  • Soudabeh Zare;Motahareh Hasani;M. Dulce Estevao;Rahim Tahmasebi;Leila Azadbakht;Farzad Shidfar;Javad Heshmati;Somayeh Ziaei
    • Clinical Nutrition Research
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    • v.12 no.4
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    • pp.293-303
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    • 2023
  • Patients with chronic renal failure, many of which treated with hemodialysis, present a high prevalence of impaired muscle strength which suggest that muscle mass parameters may be used as markers for changes in muscle in these patients. Measurement of handgrip strength (HGS) is a common, simple, and quick measure of muscle function an indicator of overall muscle strength which has been associated with physical activity and several anthropometric traits. Intercellular adhesion molecule-1 (ICAM-1) and insulin-like growth factor-1 (IGF-1) are biochemical markers associated with inflammatory processes which are a common consequence of dialysis. Additionally, hemodialysis patients frequently present signs of malnutrition and depression. This cross-sectional study aimed to evaluate if muscle and biochemical markers could be used to predict the risk of depression in hemodialysis patients. Several anthropometric parameters, nutrient intake, depression state and the serum levels of ICAM-1 and IGF-1 were determined and Pearson's correlation coefficient and/or Spearman's correlation coefficient were used to test the correlation between them. Our results do not show a correlation between HGF, IGF-1 and ICAM-1 with the depression status of the patients, but mid-arm muscle circumference (MAMC) was statistically and positively correlated with depression. Additionally, ICAM-1 levels were negatively correlated with HGS, MAMC, and IGF-1. Overall, the results of the present study suggest that HGS may be used as an indicator of cardiovascular diseases and MAMC may be a good predictor of the level of depression in hemodialysis patients, although further studies are required.

Relationship between Inequalities in Health and Inequalities in Socioeconomic Status (사회 경제적인 불평등이 건강 불평등에 미치는 영향 연구)

  • Lee, Kwang-Ok;Yoon, Hee-Sang
    • Research in Community and Public Health Nursing
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    • v.12 no.3
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    • pp.609-619
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    • 2001
  • This cross-sectional study is to measure the distribution of self-reported health by income, house type, level of education, income satisfaction and self reported social class in an effort to compare the level of health inequality in Korea. The data used in the research are the Social Statistics Survey undertaken in 1999. The correlation coefficient was used to measure the association between inequalities in health and inequalities in socioeconomic status. The correlation coefficient was the most significant between self-reported health and the level of education and income satisfaction. As for the health-related behavior, hypertension, smoking, overweight and drinking were shown to be highly correlated with self-reported health.

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Cross-Project Pooling of Defects for Handling Class Imbalance

  • Catherine, J.M.;Djodilatchoumy, S
    • International Journal of Computer Science & Network Security
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    • v.22 no.10
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    • pp.11-16
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    • 2022
  • Applying predictive analytics to predict software defects has improved the overall quality and decreased maintenance costs. Many supervised and unsupervised learning algorithms have been used for defect prediction on publicly available datasets. Most of these datasets suffer from an imbalance in the output classes. We study the impact of class imbalance in the defect datasets on the efficiency of the defect prediction model and propose a CPP method for handling imbalances in the dataset. The performance of the methods is evaluated using measures like Matthew's Correlation Coefficient (MCC), Recall, and Accuracy measures. The proposed sampling technique shows significant improvement in the efficiency of the classifier in predicting defects.

A Convective Heat Transfer Correlation for Turbulent Gas-Liquid Two-Phase Flow in Vertical Pipes

  • Kim, Dong-Woo
    • International Journal of Air-Conditioning and Refrigeration
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    • v.9 no.4
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    • pp.27-36
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    • 2001
  • A new two-phase non-boiling convective heat transfer correlation for turbulent flow $(Re_{SL}>4000)$ in vertical tubes with different fluid flow patterns and fluid combinations was developed using experimental data available from the literature. The correlation presented herein originates from a careful analysis of the major non-dimensional parameters affecting two-phase heat transfer. This model takes into account the appropriate contributions of both the liquid and gas phases using the respective cross-sectional areas occupied by the two phases. A total of 255 data points from three available studies (which included the four sets of data) were used to determine the curve-fitted constants in the improved correlation. The performance of the new correlation was compared with two-phase correlations from the literature, which were developed for specific fluid combinations.

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Comparing Korea Occupational Safety & Health Agency and National Health Insurance Service's cardio-cerebrovascular diseases risk-assessment tools using data from one hospital's health checkups

  • Yunrae Cho;Dong Geon Kim;Byung-Chan Park;Seonhee Yang;Sang Kyu Kim
    • Annals of Occupational and Environmental Medicine
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    • v.35
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    • pp.35.1-35.11
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    • 2023
  • Background: Cardio-cerebrovascular diseases (CVDs) are the most common cause of death worldwide. Various CVD risk assessment tools have been developed. In South Korea, the Korea Occupational Safety & Health Agency (KOSHA) and the National Health Insurance Service (NHIS) have provided CVD risk assessments with health checkups. Since 2018, the KOSHA guide has stated that NHIS CVD risk assessment tool could be used as an alternative of KOSHA assessment tool for evaluating CVD risk of workers. The objective of this study was to determine the correlation and agreement between the KOSHA and the NHIS CVD risk assessment tools. Methods: Subjects of this study were 17,485 examinees aged 20 to 64 years who had undergone medical examinations from January 2021 to December 2021 at a general hospital. We classified subjects into low-risk, moderate-risk, high-risk, and highest-risk groups according to KOSHA and NHIS's CVD risk assessment tools. We then compared them with cross-analysis, Spearman correlation analysis, and linearly weighted kappa coefficient. Results: The correlation between KOSHA and NHIS tools was statistically significant (p-value < 0.001), with a correlation coefficient of 0.403 and a kappa coefficient of 0.203. When we compared risk group distribution using KOSHA and NHIS tools, CVD risk of 6,498 (37.1%) participants showed a concordance. Compared to the NHIS tool, the KOSHA tool classified 9,908 (56.7%) participants into a lower risk category and 1,079 (6.2%) participants into a higher risk category. Conclusions: In this study, KOSHA and NHIS tools showed a moderate correlation with a fair agreement. The NHIS tool showed a tendency to classify participants to higher CVD risk group than the KOSHA tool. To prevent CVD more effectively, a higher estimation tool among verified CVD risk assessment methods should be selected and managements such as early intervention and treatment of risk factors should be performed targeting the high-risk group.

Performance Improvement of Stereo Acoustic Echo Canceler using the Difference of Stereo Signals (스테레오 신호의 차성분을 이용한 스테레오 음향 반향 제거기의 성능 향상)

  • 김현태;박장식;손경식
    • Journal of Korea Multimedia Society
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    • v.3 no.6
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    • pp.604-610
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    • 2000
  • A stereo acoustic echo canceller has significant cross-correlation between each channel signal. As the result, the adaptive filter coefficient that estimates the acoustic echo path of a receiving room can misconverge to the path or converge slowly. In this paper, a new preprocessor using absolute difference in stereo signals is proposed to reduce cross-correlations and to improve the removal efficiency of the stereo acoustic echo. Compared to the previous preprocessor using a half wave rectifier, the newly proposed preprocessor showed better performance according to computer simulation. In addition, when the paths of transmitting room were changed the performance of the proposed preprocessor was not degraded.

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A 4-port MIMO Antenna for LTE Femtocell using Cross Decoupler (Cross Decoupler를 이용한 LTE 펨토셀용 4-port MIMO 안테나)

  • Ahn, Sang-Kwon;Jeong, Gye-Taek;Lee, Hwa-Choon;Kwak, Kyung-Sup
    • The Journal of The Korea Institute of Intelligent Transport Systems
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    • v.13 no.2
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    • pp.50-56
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    • 2014
  • This paper describes the design, fabrication, and measurement of a 4-port femtocell MIMO antenna for LTE 700MHz(Band12, 13, 14, 17, 28, 44) applications. Based on microstrip patch antenna, an impedance matching is achieved by short pin. In order to obtain sufficient bandwidth and isolation between antenna elements in a limited dimension, a cross decoupler is used. With a Voltage Standing Wave Ratio (VSWR)${\leq}2$, the measured result of the fabricated antenna provides 105MHz(0.698~0.803MHZ) bandwidth and shows the gain with 1.97dBi and isolation above 13dB. As one of the key parameters for MIMO performance evaluation, correlation coefficient of MIMO is achieved within 0.2.

Numerical Determination of Lateral Loss Coefficients for Subchannel Analysis in Nuclear Fuel Bundles (핵 연료집합체 부수로 해석을 위한 횡 방향 압력손실계수의 수치적 결정)

  • Kim, Sin;Park, Goon-Cherl
    • Nuclear Engineering and Technology
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    • v.27 no.4
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    • pp.491-502
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    • 1995
  • In accurate prediction of cross-flow based on detailed knowledge of the velocity field in subchannels of a nuclear fuel assembly is of importance in nuclear fuel performance analysis. In this study, the low-Reynolds number k-$\varepsilon$ turbulence model has been adopted in too adjacent subchannels with cross-flow. The secondary flow is accurately estimated by the anisotropic algebraic Reynolds stress model. This model was numerically calculated by the finite element method and has been verified successfully through comparison with existing experimental data. Finally, with the numerical analysis of the velocity Held in such subchannel domain, an analytical correlation of the lateral loss coefficient is obtained to predict the cross-flow rate in subchannel analysis codes. The correlation is expressed as a function of the ratio of the lateral How velocity to the donor subchannel axial velocity, recipient channel Reynolds number and pitch-to-diameter.

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