• Asian-Australasian Journal of Animal Sciences
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• 제5권2호
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• pp.285-294
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• 1992

Biochemical polymorphisms of sow's milk proteins, $\beta$-casein ($\beta$-CN), $\beta$-lactoglobulin ($\beta$-LG), post-lactoglobulin (post-LG), $\alpha$-lactalbumin ($\alpha$-LA) and X-protein, as genetic markers for major pig breeds (Landrace, Yorkshire, Duroc, Hampshire and cross bred) in Korea were determined by starch gel electrophoresis. Phenotype and gene frequencies at all marker loci were estimated and genetic differences among breed populations were analyzed. Three $\beta$-CN phenotypes (AA, AB and BB) controlled by two codominant alleles (${\beta}-CN^A$ and ${\beta}-CN^B$), four $\beta$-LG phenotypes (AA, AC, $AC^{\pm}$ and CC) controlled by two codominant alleles (${\beta}-LG^A$ and ${\beta}-LG^C$) and ten X-protein phenotypes (AA, BB, CC, DD, AB, AC, AD, BC, BD and CD) controlled by four codominant alleles ($X^A,\;X^B,\;X^C\;and\;X^D$) were identified. In addition, a genetically controlled polymorphism of post-LG was found for the first time in sow's milk protein. Three different phenotypes (AA, AB and BB) were designated $post-LG^A$ and $post-LG^B$. Of the five marker loci examined, $\alpha$-LA locus was observed to lack any individual variation in all breeds studied. All populations were in Hardy-Weinberg equilibrium for all loci. There were marked breed differences for phenotype and gene frequencies in the post-LG and X-protein marker loci. However, there were little differences between breeds in the gene frequencies at the $\beta$-CN and $\beta$-LG marker loci.

• Asian-Australasian Journal of Animal Sciences
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• 제32권12호
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• pp.1816-1825
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• 2019

Objective: We tried to analyze allele-specific expression in the pig neocortex using bioinformatic analysis of high-throughput sequencing results from the parental genomes and offspring transcriptomes from reciprocal crosses between Korean Native and Landrace pigs. Methods: We carried out sequencing of parental genomes and offspring transcriptomes using next generation sequencing. We subsequently carried out genome scale identification of single nucleotide polymorphisms (SNPs) in two different ways using either individual genome mapping or joint genome mapping of the same breed parents that were used for the reciprocal crosses. Using parent-specific SNPs, allele-specifically expressed genes were analyzed. Results: Because of the low genome coverage (${\sim}4{\times}$) of the sequencing results, most SNPs were non-informative for parental lineage determination of the expressed alleles in the offspring and were thus excluded from our analysis. Consequently, 436 SNPs covering 336 genes were applicable to measure the imbalanced expression of paternal alleles in the offspring. By calculating the read ratios of parental alleles in the offspring, we identified seven genes showing allele-biased expression (p<0.05) including three previously reported and four newly identified genes in this study. Conclusion: The newly identified allele-specifically expressing genes in the neocortex of pigs should contribute to improving our knowledge on genomic imprinting in pigs. To our knowledge, this is the first study of allelic imbalance using high throughput analysis of both parental genomes and offspring transcriptomes of the reciprocal cross in outbred animals. Our study also showed the effect of the number of informative animals on the genome level investigation of allele-specific expression using RNA-seq analysis in livestock species.

• Asian-Australasian Journal of Animal Sciences
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• 제21권2호
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• pp.245-251
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• 2008

The effects of feeding diets containing 20% (L) or 30% (H) neutral detergent fiber (NDF) (DM basis) on performance and carcass traits were studied in three breeds of pig, including pure Mong Cai (MC), crossbred Landrace$\times$Yorkshire (LY) and crossbred MC$\times$Yorkshire (F1). The experiment had a factorial design with two factors, breed and diet. Eighteen piglets of each breed ($60{\pm}3days$) were randomly allocated to three treatments: L-L, low fiber diet in both growing and finishing periods; L-H, low and high fiber diet in the growing and finishing period, respectively; and H-H, high fiber diet in both periods. The diets were iso-energetic and iso-nitrogenous within feeding period. The main fibrous ingredients of the diets were rice bran and cassava residue. There were no effects of fiber level on daily dry matter feed intake (DMI), expressed as g/kg metabolic body weight (BW0.75), in both feeding periods (p>0.05). DMI was highest for MC, followed by F1 and LY (p<0.001). Average daily gain (ADG) in L-L and L-H was higher than in H-H in the growing period (p<0.001) and overall (p<0.05), while feed conversion ratio (FCR) was higher in H-H than in L-L and L-H in the growing period (p<0.05) and overall, but no significant differences between treatments were found in the finishing period. In both periods, Landrace$\times$Yorkshire had the highest ADG and the lowest FCR, followed by F1 and Mong Cai (p<0.001). There were no interactions between breed and diet for performance and carcass traits. Carcass and dressing percentage was lower for L-H and H-H than for L-L (p<0.05). There were no significant differences among treatments in back fat thickness and lean meat percentage, or in crude protein and ether extract contents of lean meat. Carcass, dressing and lean meat percentage was highest for LY, lowest for MC and intermediate for F1 (p<0.001). It can be concluded that feeding a high fiber diet in the growing period reduced pig performance, but there was no effect in the finishing period. Pure Mong Cai pigs are not particularly suitable for meat purposes, although the F1 cross with Large White had reasonably good growth performance and carcass quality.

• 한국축산식품학회지
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• 제27권4호
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• pp.401-408
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• 2007

본 연구는 한국 재래 오골계의 성장에 따른 조직학적 및 생리학적 특성을 분석하기 위해 수행하였다. 계군들의 체중, 흉근과 가자미근의 무게 측정 및 시료의 채취는 부화 직후 및 3, 5, 15주령에 이루어졌다. 근섬유 특성은 부화 직후에서 15주령까지의 오골계 흉근과 가자미근을 이용하여 분석하였고, DNA, RNA 및 단백질 함량은 왼쪽 흉근에서 측정하였다. 체중의 상대적인 증가율은 부화 직후에서 3주령까지의 기간에 가장 크게 나타났다. 가슴의 무게는 부화 직후에서 3주령까지의 기간에 약 24.46배가 증가했으며, 가슴 중 흉근도 동일한 기간 동안 약 31.14배 증가하였다. 소퇴부 및 가자미근의 무게 역시 부화 직후에서 3주령까지의 시기에 뚜렷한 증가가 나타났다. 모든 근섬유의 단면적은 성장 기간 동안 증가하는데, 15주의 실험 기간 동안 흉근의 근섬유 단면적은 65배 증가($34.06\;{\pm}\;3.08$에서 $2238\;{\pm}\;177\;{\mu}m^2$)하였다. 흉근의 근섬유 단면적은 부화 직후에서 3주령까지의 기간에는 약 18배, 3주령에서 5주령까지의 기간 동안에는 약 1.6배 증가를 보였다. 따라서 흉근의 근섬유 단면적과 무게 역시 3주령 때까지 가장 큰 증가를 보임을 알 수 있다. 핵산 및 단백질의 함량을 분석한 실험에서도 부화 직후에서 3주령 사이에 가장 큰 증가가 나타났는데, 부화부터 3주령까지의 기간 동안 각각 DNA 총량은 13배, RNA 총량은 21배, 단백질 총량은 30배 증가한 것으로 나타났다.

• Asian-Australasian Journal of Animal Sciences
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• 제16권7호
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• pp.952-961
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• 2003

In the first part of the study, rates of estrus occurrence and success of A.I. service in the Thai-native and Friesian crossbred, and purebred Friesian cows fed in the National Dairy Training and Applied Research Institute in Chiang Mai, Thailand were traced monthly throughout a year. An electric fan and a water sprinkler cooled the stall for the purebred cows during the hot season (March-September). Both rates in pure Friesians were at their highest in the cold-dry season (October- February), but they decreased steadily during the hot-dry season (March-May) and were at their lowest in the hot-wet season (June-September). Seasonal change of a similar pattern was observed in the incidence of estrus, but not in the success rate of insemination in the crossbred cows. By the use of reproductive data, compiled in the same institute, on the 75 % cross- and purebred Friesian cows, and climatological data in Chiang Mai district, effects of ambient temperature and humidity on the reproductive traits of cows were examined by regression analysis in the second half of the study. Significant relationships in the crossbred, expressed by positive-linear and parabola regressions, were found between reproductive parameters such as days to the first estrus (DTFE), A.I. service (DTFAI), and conception, the number of A.I. services required for conception and some climatic factors. However, regarding this, no consistent or intelligible results were obtained in purebred cows, perhaps because electric fans and water sprinklers were used for this breed in the hot season. Among climatic factors examined, the minimum temperature (MINT) in early lactation affected reproductive activity most conspicuously. As the temperature during one or two months prior to the first estrus and A.I. service rose, DTFE and DTFAI steadily became longer, although, when MINT depleted below $17-18^{\circ}C$, the reproductive interval tended to be prolonged again on some occasions. The maximum temperature also affected DTFE and DTFAI, but only in limited conditions. The effect of humidity was not clear, although the inverse relationship between DTFE and minimum humidity during 2 months before the first estrus in the crossbred seemed to be significant. Failure to detect any definite effect of climate on the reproductive traits of pure Friesians seemed to indicate that forced ventilation by electric fans and water sprinklers were effective enough to protect the reproductive ability of this breed from the adverse effects of a hot climate.

• 한국수정란이식학회지
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• 제28권3호
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• pp.215-222
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• 2013

Bovine coat color is decided by the melanocortin receptor 1 (MC1R) genotype mutation and melanogenesis. Specially, in the various cattle breeds, dominant black coat color is expressed by dominant genotype of $E^D$, red or brown is expressed in the frame shift mutation of recessive homozygous e by base pair deletion and wild type of $E^+$ is expressed in various coat colors. However, not very well known about the effected of MC1R genotype mutation on the coat color through family lines in KBC. Therefore, this study were to investigate effect of MC1R genotype mutation on the coat color, and to suggest mating breed system in accordance with of MC1R genotype for increased on brindle coat color appearance. Parents (sire 2 heads and dam 3 heads) and offspring (total : 54 heads) from crossbreeding in KBC family line with the MC1R genotype and phenotype records were selected as experimental animals. The relationship between melanocortin 1 receptor (MC1R) genotypes expression verified by PCR-RFLP, and brindle coat color appearance to the family line of the cross mating breed from MC1R genotype pattern was determined. As a result, 4MC1R genetic variations, $E^+/E^+$ (sire 1), $E^+/e$ (sire 2 and dam 3), $E^+/e$ with 4 bands of 174, 207 and 328 bp (dam 1) and $E^+/e$ with 3 bands of 174, 207, 328 and 535 bp (dam 2) from parents (sire and dam) of KBC. However, 3 genetic variations, e/e (24%), $E^+/E^+$ (22%) and $E^+/e$ (56%) were identified in offspring. Also, brindle coat color expressrated was the e/e with the 0%, $E^+/E^+$ with 67% and $E^+/e$ with 77% from MC1R genotype in offspring on the cross mating of KBC. Furthermore, when the sire had $E^+/e$ genotype and the dam had $E^+/E^+$ with the 3 bands or $E^+/e$ genotype, and both had whole body-brindle coat color, 62% of the offspring had whole body-brindle coat color. Therefore, the seresults, the mating system from MC1R genotype patterns of the sires ($E^+/e$) and dams ($E^+/E^+$ with the 3 bands or $E^+/e$) with brindle coat color may have the highest whole body-brindle coat color expression in their offspring.

• 한국가금학회지
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• 제9권2호
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• pp.63-101
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• 1982

육용계에서 가식육량을 효과적으로 추정할 수 있는 방법을 구명코자 White Cornish종과 S. C. W. Leghorn종. 그리고 이 두 품종의 상반교잡종을 각각 120수씩 계 480수를 공시하여 체중. 부위별 가식육 및 체형의 변화, 이들 형질에 발현된 잡종강세와 반성유전효과 및 화학적 조성분함량을 조사하고. 성장단계별 가식육량을 추정한 결과를 요약하면 다음과 같다. 1. W. Cornish종의 8주시 체중 및 사료요구율과 폐사율을 보면 각각 1,818.8$\pm$47.7g와 2.24 및 3.30%였고 S. C. W. Leghorn종에선 각각 667.8$\pm$28.9g와 3.28 및 2.50%였으며 잡종들의 능력은 이 두 품종의 중간정도로 정상발육을 하였다. 2. 체중에 있어서 계종간 차이는 2주령부터 유의성이 인정되었고. 성장곡선의 회귀방정식에서 성장속도를 표시하는 회귀계수률 보면 W. Cornish종( $b_{cc}$ =1,578)은 S. C. W. Leghorn종 ( $b_{LL}$ =1,378)에 비해 유의적으로 크고 교잡종들은 이 두 품종의 중간값( $b_{LC}$ =1,476, $b_{CL}$ =1,470)을 보인다. 가식육량의 경우도 계종간 증가양상이 체중의 경우와 비슷하였으나 육량증가의 회귀방정식에서 회귀계수의 크기가( $b_{LL}$ =1,563, $b_{LC}$ =1,651, b.$_{CL}$ =1,636, $b_{CC}$ =1,766) 체중에서 보다 컷는데 그 원인이 성장속도 차이때문인지를 구명하기 위해 주령(log x)과 체중에 대한 가식육량비율(log y) 간의 선형관계를 추정한 결과 각 계종의 회귀계수( $b_{LL=0.184}$, $b_{LC}$ =0.175, $b_{CL=0.165}$ 및 $b_{CC}$ =0.188)는 모두유의성이 인정되어 가식육의 증가속도는 체중의 증가속도보다 현저히 빠른 것으로 판명되었다. 3. 체중구성요소중 주령경과에 따라 그 중량비율이 증가되는 것은 우모, 복강지방, 흉부 및 퇴경부이고, 감소되는 것은 두부, 경부, 가식내장 및 부가식내장이며 방혈량, 각부, 익부 및 배부는 큰 변화를 보이지 않는다.

• Asian-Australasian Journal of Animal Sciences
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• 제22권7호
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• pp.943-954
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• 2009

Diacylglycerol acyltransferase (DGAT) is a key enzyme that catalyzes the final and rate-limiting step of triglyceride synthesis. Both DGAT1 and DGAT2 genes code proteins with DGAT activity. Studies have shown DGAT1 polymorphisms associate with intramuscular fat deposition in beef cattle, but fewer associations between DGAT2 and beef cattle economic traits have been reported. The objective of this study was to investigate single nucleotide polymorphism (SNP) in intron3 of bovine DGAT2 and evaluate the associations of that with carcass, meat quality, and fat yield traits. Test animals were 157 commercial feedlot steers belonging to 3 Chinese native breeds (22 for Luxi, 24 for Jinnan, and 23 for Qinchuan), 3 cross populations (20 for Charolais${\times}$Fuzhou, 18 for Limousin ${\times}$Luxi, and 17 for Simmental${\times}$Jinan) and 1 Taurus pure breed population (16 Angus steers). In the current study, 15 SNP were discovered in intron3 and exon4 of DGAT2 at positions 65, 128, 178, 210, 241, 255, 270, 312, 328, 334, 365, 366, 371, 415, and 437 (named as their positions in PCR amplified fragments). Only 7 of them (128, 178, 241, 270, 312, 328, and 371) were analyzed, because SNP in three groups (65-128-255, 178-210-365 and 241-334-366) were in complete linkage disequilibrium within the group, and SNP 415 was a deletion and 437 was a null mutation. Frequencies for rare alleles in the 3 native breed populations were higher than in the 3 cross populations for 178 (p = 0.04), 270 (p = 0.001), 312 (p = 0.03) and 371 (p = 0.002). A general linear model was used to evaluate the associations between either SNP genotypes or allele substitutions and the measured traits. Results showed that SNP 270 had a significant association with the fat yield associated with kidney, pelvic cavity, heart, intestine, and stomach (KPHISY). Animals with genotype CC and CT for 270 had less (CC: -7.71${\pm}$3.3 kg and CT: -5.34${\pm}$2.5 kg) KPHISY than animals with genotype TT (p = 0.02). Allele C for 270 was associated with an increase of -4.26${\pm}$1.52 kg KPHISY (p = 0.006) and $-0.92{\pm}0.45%$ of retail cuts weight percentage (NMP, Retail cuts weight/slaughter body weight) (p = 0.045); allele G for 312 was associated with an increase of -5.45${\pm}$2.41 kg KPHISY (p = 0.026). An initial conclusion was that associations do exist between DGAT2 gene and carcass fat traits. Because of the small sample size of this study, it is proposed that further effort is required to validate these findings in larger populations.

• 한국가금학회지
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• 제48권2호
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• pp.69-80
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• 2021

본 연구는 생산능력이 우수한 신품종 토종 종계를 개발하기 위하여 (주)한협원종이 보유한 원종계(GPS) 4개 계통 934수를 이용하여 4 × 4 이면교배조합(diallel cross-mating) 검정 시험을 실시하였다. 검정 형질로서 외모 형태, 생존율, 체중, 초산일령, 난중 및 산란율을 대상으로 조합별 생산능력, 조합가, 결합능력 및 상반교잡 효과를 분석하였다. 분석 결과, 대부분의 교배조합 개체들의 깃털 색은 황갈색 및 적갈색과 이들 색 간의 혼합 양상을 나타내었다. 전체 조합의 평균 생존율은 86.8±12.3%이고, YH 조합의 생존율이 가장 높았다. 생존율의 조합가는 특정결합능력이 일반결합능력에 비해 상대적으로 크게 영향을 미치는 것으로 나타났고, HY의 특정결합능력이 가장 높게 나타났다. 체중의 경우, 16개의 교배 조합이 유전적 특성에 따라 세 그룹으로 명확히 구분되는 것으로 나타났다. 12주령 체중의 교배조합별 조합가는 계통별 일반결합능력이 두 계통 간의 특정결합능력보다 크게 영향을 미치는 것으로 나타났고, FH 조합에서 가장 높은 조합가가 추정되었다. 산란 형질에 있어 전체 교배조합구의 평균 초산일령은 157일로서 교잡 구가 순계 구보다 빠른 성 성숙을 보였다. 전체 조합의 평균 일계산란율은 69.0±10.9%로서 이들 중 SY 조합이 가장 높은 산란율을 보였다. 산란율의 일반결합능력과 특정결합능력의 추정 범위가 거의 비슷한 값을 나타내고 있으며, 교배조합 간 특정결합능력은 HS 및 FY 조합에서 높게 나타났다. 또한 상반교잡 효과는 대부분의 조합에서 S와 Y를 모(母)로 사용하였을 때 자손들의 산란능력이 상대적으로 높게 나타났다. 이상의 결과에 따라 신품종토종닭 종계로써 부계는 체중이 우수하면서 상대적으로 생존율이 양호한 FH나 HF 조합이, 모계는 산란능력이 우수하며 적절한 체중을 지닌 FY, FS, HY 및 SY 조합이 바람직한 것으로 사료된다.

• Asian-Australasian Journal of Animal Sciences
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• 제20권5호
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• pp.669-676
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• 2007

This study was conducted to detect quantitative trait loci (QTL) affecting growth and body composition in an $F_2$ reference population of Korean native pig and Landrace crossbreds. The three-generation mapping population was generated with 411 progeny from 38 $F_2$ full-sib families, and 133 genetic markers were used to produce a sex-average map of the 18 autosomes. The data set was analyzed using least squares Mendelian and parent-of-origin interval-mapping models. Lack-of-fit tests between the models were used to characterize QTL for mode of expressions. A total of 8 (39) QTL were detected at the 5% genome (chromosome)-wise level for the 17 analyzed traits. Of the 47 QTL detected, 21 QTL were classified as Mendelian expressed, 13 QTL as paternally expressed, 6 QTL as maternally expressed, and 7 QTL as partially expressed. Of the detected QTL at 5% genome-wise level, two QTL had Mendelian mode of inheritance on SSC6 and SSC9 for backfat thickness and bone weight, respectively, two QTL were maternally expressed for leather weight and front leg weight on SSC6 and SSC12, respectively, one QTL was paternally expressed for birth weight on SSC4, and three QTL were partially expressed for hot carcass weight and rear leg weight on SSC6, and bone weight on SSC13. Many of the Mendelian QTL had a dominant (complete or overdominant) mode of gene action, and only a few of the QTL were primarily additive, which reflects that heterosis for growth is appreciable in a cross between Korean native pig and Landrace. Our results indicate that alternate breed alleles of growth and body composition QTL are segregating between the two breeds, which could be utilized for genetic improvement of growth via marker-assisted selection.