• 제목/요약/키워드: cleavage.

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Theoretical Studies on the Acid-Catalyzed Hydrolysis of Sulfinamide

  • 김찬경;이익준
    • Bulletin of the Korean Chemical Society
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    • 제18권8호
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    • pp.880-886
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    • 1997
  • Ab initio calculations were carried out on the gas phase acid-catalyzed hydrolysis reactions of sulfinamide using the 3-21G* basis sets. Single point calculations were also performed at the MP2/6-31G* level. The first step in the acid-catalyzed hydrolysis of N-methylmethanesulfinamide, Ⅰ, involves protonation. The most favorable form is the O-protonated one, Ⅱ, which is then transformed into a sulfurane intermediate, Ⅲ, by addition of a water molecule. The reaction proceeds further by an intramolecular proton transfer from O to N (TS2), which is followed by N-S bond cleavage (TS3) leading to the final products. The rate determining step is the N-S bond cleavage (TS3) at the RHF/3-21G* level, whereas it becomes indeterminable at the MP2/6-31G*//3-21G* level of theory. However, the substituent effect studies with N-protonated N-arylmethanesulfinamide, ⅩⅢ, at the MP2/6-31G*//3-21G* level support the N-S bond breaking step as rate limiting.

XPS Studies of CO Adsorption on Polycrystalline Nickel Surface

  • Boo, Jin-Hyo;Ahn, Woon-Sun
    • Bulletin of the Korean Chemical Society
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    • 제9권6호
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    • pp.388-393
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    • 1988
  • The chemisorption of CO molecules on polycrystalline nickel surface has been studied by investigating the resulting chemisorbed species with the X-ray photoelectron spectroscopy at temperatures between 300K through 433K. It is found that the adsorbed CO molecules are dissociated by the simple C-O bond cleavage as well as by the disproportionation reaction at temperatures above 373K. The former type dissociation is more favored at low coverages and at elevated temperatures. The isotherms of CO chemisorption are obtained from the xps intensities of C 1s peaks, and then the activation energy of the dissociative adsorption is estimated as a function of the CO exposure. These activation energies are extrapolated to zero coverage to obtain the activation energy of chemisorption in which thermal C-O bond cleavage takes place. The value obtained is 38.1 kJ/mol.

A Conformational Study of Oligosaccharides Investigated by Tandem Mass Spectrometry and Molecular Modeling

  • Eunsun Yoo Yoon
    • Bulletin of the Korean Chemical Society
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    • 제22권3호
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    • pp.293-297
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    • 2001
  • The purpose of this paper is to introduce the simplified linkage position determination method using tandem mass spectrometry combined with molecular modeling study. Using low energy tandem mass spectrometric experiments and molecular modeling, it has been suggested that significant differences in glycosidic bond cleavage may occur due not only to ionic considerations but also may have contributions from steric hindrance of the absorbance of collision energy, leading to a statistically higher bond cleavage for sterically crowded linkages. Permethylated derivatives of the linkage-isomeric trisaccharides give useful fragmentation ratios and productions, including a 3-linkage specific ion. The ratios of fragment ions are related to the ability of each linkage position in the oligosaccharide to absorb collisional energy.

Involvement of Akt in mitochondria-dependent apoptosis induced by a naphthoquinone analog

  • Kang, Seung-Koo;Kim, Hae-Jong;Chun, Young-Jin;Kim, Mie-Young
    • 대한약학회:학술대회논문집
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    • 대한약학회 2003년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2-2
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    • pp.158.2-158.2
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    • 2003
  • Vitamin K-related analogs induce growth inhibition in various cancer cell lines. We report that 2,3-dichloro-5,8-dihydroxy-1, 4-naphthoquinone (DDN), a naphthoquinone analog, induces mitochondria-dependent apoptosis in human promyeloid leukemic HL-60 cells. DDN induced cytochrome c release, cleavage of Bid, and activation of caspases -8, -9 and -3. Cleavage of Bid, the caspase-8 substrate, was inhibited by the broad caspase inhibitor zVAD-fmk, whereas cytochrome c release was not affected by zVAD-fmk. (omitted)

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The Role of Proprotein Convertases in Upper Airway Remodeling

  • Lee, Sang-Nam;Yoon, Joo-Heon
    • Molecules and Cells
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    • 제45권6호
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    • pp.353-361
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    • 2022
  • Chronic rhinosinusitis (CRS) is a multifactorial, heterogeneous disease characterized by persistent inflammation of the sinonasal mucosa and tissue remodeling, which can include basal/progenitor cell hyperplasia, goblet cell hyperplasia, squamous cell metaplasia, loss or dysfunction of ciliated cells, and increased matrix deposition. Repeated injuries can stimulate airway epithelial cells to produce inflammatory mediators that activate epithelial cells, immune cells, or the epithelial-mesenchymal trophic unit. This persistent inflammation can consequently induce aberrant tissue remodeling. However, the molecular mechanisms driving disease within the different molecular CRS subtypes remain inadequately characterized. Numerous secreted and cell surface proteins relevant to airway inflammation and remodeling are initially synthesized as inactive precursor proteins, including growth/differentiation factors and their associated receptors, enzymes, adhesion molecules, neuropeptides, and peptide hormones. Therefore, these precursor proteins require post-translational cleavage by proprotein convertases (PCs) to become fully functional. In this review, we summarize the roles of PCs in CRS-associated tissue remodeling and discuss the therapeutic potential of targeting PCs for CRS treatment.

Characteristics of Wood Meals by Laccase Delignification

  • Kim, MyungKil
    • Journal of the Korean Wood Science and Technology
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    • 제31권3호
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    • pp.11-16
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    • 2003
  • On nitrobenzene oxidation of aspen, spruce, and knauf wood meals gave rise to vanilline, syrigaldehyde, p-hydroxybenzoaldehyde, vanillic acid, and other minor oxidation products. The phenolic aldehydes (p-hydroxybenzaldehyde, vanilline, and syringaldehyde) are derived from oxidative degradation of the corresponding 4-hydroxyphenylpropane units and their ethers. The lignin content of knauf wood meals was different as the concentration of NaOH solution and cooking temperature. The lignin contents of aspen, spruce, and knauf wood meals were decreased as laccase treatment. The laccase caused C-oxidation, demethylation, cleavage in phenolic groups and C-C cleavage in syrigyl structures.

Investigating the Efficiency of Formic Acid and Hydrochloric Acid in Weak Acid Hydrolysis for Myoglobin

  • Jihyun Paek;Hyojin Hwang;Yeoseon Kim;Dabin Lee;Jeongkwon Kim
    • Mass Spectrometry Letters
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    • 제14권2호
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    • pp.48-55
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    • 2023
  • This study compares the efficiency of weak acid hydrolysis (WAH) using formic acid (FA) and hydrochloric acid (HCl) in the analysis of myoglobin peptides. WAH using 2% and 5% formic acid resulted in the identification of 32 peptides, with varying degrees of cleavage at the C-terminus of aspartic acid residues. HCl WAH with different concentrations demonstrated an increase in the total number of identified peptides but a decrease in fully cleaved peptides as the HCl concentration increased. Notably, deamidation was observed during HCl WAH but not in FA WAH. The addition of HCl WAH after FA WAH provided a similar pattern to HCl WAH, with slightly higher levels of hydrolysis. These findings highlight distinct cleavage patterns and deamidation effects between FA and HCl in the context of WAH.

모조(模造) 환경조건하(環境條件下)에서의 치환(置換) Diphenyl Ether 제초제(除草劑)의 광분해(光分解)에 관(關)한 연구(硏究) (Solution Phase Photolyses of Substituted Diphenyl Ether Herbicides under Simulated Environmental Conditions)

  • 이재구
    • Applied Biological Chemistry
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    • 제17권3호
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    • pp.149-176
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    • 1974
  • 팔종(八種)의 치환(置換) diphenyl ether 제초제(除草劑)를 Rayonet 광화학(光化學) 반응기(反應器)를 사용(使用)한 모조환경조건하(模造環境條件下)에서 용액상(溶液相) 광분해(光分解)시켜 그 분해산물(分解産物)에 관(關)하여 연구(硏究)하였다. 시료(試料)로 사용(使用)된 화합물(化合物)들은 300 nm에서 광화학반응(光化學反應)을 일으키기에 충분(充分)한 energy를 흡수(吸收)하였으며 분해산물(分解産物)은 tlc, glc, ir, ms, 그리고 nmr 등(等)에 의(依)하여 확인(確認)하였다. 그 결과(結果)를 요약(要約)하면 C-6989의 용액상(溶液相) 광분해(光分解) : p-nitrophenol이 다량(多量) 생성(生成)됨을 보아 ether결합(結合)의 결렬이 주반응(主反應)이며 치환기(置換基) $NO_2{\rightarrow}NH_2$의 광화학적(光化學約) 환원반응(還元反應)과 $CF_3{\rightarrow}COOH$의 산화반응(酸化反應)도 관찰되었다. p-Nitrophenol의 수중(水中) 광분해(光分解) : quinone(0.28%), hydroquinone(0.66%) 및 p-aminophenol(0.42%)과 비교적(比較的) 소량(少量)의 미지화합물(未知化合物)이 생성(生成)됨을 확인(確認)하였고 모화합물(母化化合物)은 대부분(大部分) 작용(作用)을 받지 않은 채로 존재(存在)하였다. 이들 분해산물(分解産物)의 형성기구(形成機構)는 $n{\rightarrow}{\pi}^*$ 및 여기(勵起)를 거친 nitro-nitrite재배열(再配列) 및 자유기(自由基)에 의(依)한 수소탈취(水素脫取)를 통(通)한 광환원(光還元)으로 추측(推測)되었다. Nitrofen의 용액상(溶液相) 광분해(光分解) : n-hexane중(中)에서는 $NO_2$기(基)의 광환원(光遷元)이 주반응(主反應)이었고 수용액(水溶液) 중(中)에서는 광환원(光遷元) 및 hydroxylation이 ether결합(結合) 결렬 보다 현저하였다. hydroxide ion에 의한 친핵적(親核的) 치환(置換), hydroxyl기(基) 및 소량(少量)이긴 하지만 수소(水素)에 의한 염소(鹽素)의 치환(置換)도 다소 관찰되었다. MO-338의 용액상(溶液相) 광분해(光分解) : n-hexane용액중(中) nitro기(基)의 광환원(光遷元) 반응(反應)과 수용액중(水溶液中)에서의 광환원(光遷元) 및 hydroxylation이 주반응(主反應)이었으며 hydroxyl기(基)와 수소(水素)에 의(依)한 염소(鹽素)의 치환(置換) 및 ether결합(結合)의 결렬도 볼 수 있었다. n-Hexane과 cyclohexane중(中)에서의 MC-4379, MC-3761, MC-5127, MC-6063 및 MC-7181의 광분해(光分解) : nitro기(基)의 광환원반응(光還元反應)과 수소(水素)에 의(依)한 halogen의 치환반응(置換反應)이 주(主)로 일어났다. MC-4379의 수중(水中) 광분해(光分解) : ether결합(結合)의 결렬, hydroxyl기(基)에 의한 carboxymethyl기(基)의 치환(置換), hydroxylation, hydroxyl기(基)에 의한 nitro기(基)의 치환(置換)이 주(主)로 일어났고 광환원(光還元) 및 광염소화반응(光鹽素化反應)도 약간 일어났다. MC-3761의 수중(水中) 광분해(光分解) : ether결합(結合)의 결렬, hydroxyl기(基)에 의한 carboxymethyl기(基)의 치환(置換) 및 hydroxylation이 수반되는 광환원(光還元)이 주반응(主反應)이었다. MC-5127의 수중(水中) 광분해(光分解) : 수소(水素)에 의한 carboxyethyl기(基)의 치환(置換)이 현저 하였고 ether결합(結合)의 결렬, 광환원(光還元) 및 탈염소화반응(脫鹽素化反應)도 약간 관찰되었으며 decarboxyethylation은 decarxy-methylation보다 용이함을 볼 수 있었다. MC-6063의 수중(水中) 광분해(光分解) : ether결합(結合)의 결렬과 탈염소화반응(脫鹽素化反應)이 주(主)로 관찰되었다. MC-7181의 수중(水中) 광분해(光分解) : 수소(水素)에 의한 carboxymethyl기(基)의 치환(置換)과 monodechlorination이 현저하였고 ether결합(結合) 결렬과 hydroxylation도 약간 일어났다. 3-Carboxymethyl-4-nitrophenol의 수중(水中) 광분해(光分解) : 방향족(芳香族) ester에서 흔히 볼 수 있는 광유도(光誘導) Fries rearrangement는 이 화합물(化合物)의 carboxymethyl기(基)에서는 볼 수 없었고 $nitro{\to}nitroso$반응(反應)이 주(主)로 일어났다.

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