• 미생물학회지
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• 제24권3호
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• pp.276-287
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• 1986

ChIarella elliPsoidea를 rifampicin이 함유된 M4N 배지에 7일간 배양하였다. 배양기간 동안에 일정량 세포를 수확하여 생장율을 측정하였다. 이들 세포에서 분리된 엽록체로 부터 핵산과 RNA polymerase를 추출하여 함량을 염기별로, 분석, 활성도를 측정하여 핵산 합성에 비치는 rifampicin의 효과를 대조구와 비교하며 분석하였다. 생장 억제 효과를 나타내는rifampicin의 농도는 80ppm 이였다. Whole cell system과 분리한 엽록체에서의 DNA함량은 대조구에 비해 각각 70%, 60%의 감소를 나타내였다. Rifampicin은 RNA 염기 함양도 whole cell system에서는 46% 억제되었고 분리한 엽록체에서는 77% 저해효과가 관찰되었다. Rifampicin에 의한 RNA polymerase 활성도는 whole cell system에서는 10% 감소, 분리한 엽록체에서는 42% 억제를 나타내었다.

• 미생물학회지
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• 제4권1호
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• pp.1-13
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• 1966

The author examined for observing the structures of pyrenoid and cell wall of three strains of Chlorella ellipsoidea and relation of pyrenoid to starch grain formation at the ultrastructure level. 1. The development of pyrenoid of Chlorella species from the time of its initiation and its subdetail sequent activities are described in some pictures. 2. Close correlation between the findings of light microscopy and electron microscopy is proved. 3. The pyrenoid is a dynamic organellae which continues to change its appearance thoughout the development of the Chlorella cell. 4. The starch grains are continously formed by deposition of carbohydrate within the chloroplast with the aid of pyrenoid factors. 5. Some parental starch grains are passed on the daughter cell during cell division. 6. The Da stage cells contain only chlaroplast without pyrenoid matrix. In Da stage a pyrenoid is surrounded by starch and starch grains appear in chloroplast lamellae. In $L_1L_2$ stages, large starch grains of lens form accumulate in cell. In $L_3$ stage pyrenoid disappears for a time and starch grains are scattered. In cell division stage starch grains are divided into four groups. In $L_4$ stage, pyrenoid substance appears temporarily and disappears soon. At this stage the cell is constituted of Dn cell containing chloroplast only. 7. The cellular boundary of JE strain except Y 815 and Y 511 strain contains 250.angs. intermediate layer of unknown chemical composition between the fibrillar cellulose wall and the out capsule layer.

• Journal of Species Research
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• 제6권1호
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• pp.76-90
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• 2017

Aster altaicus var. uchiyamae Kitam. is an endemic taxon of Korea and is protected by law as an endanger taxon. The genetic information of A. altaicus var. uchiyamae is unavailable in Genbank. Here we sequenced chloroplast genome of A. altaicus var. uchiyamae. The cp-genome of Aster altaicus var. uchiyamae was 152,446 bps in size: LSC was 84,240 bps, IR 25,005 bps, SSC 18,196 bps. The cp-genome contains 112 genes and 21 introns consisted of 79 protein coding genes(PCGs), 4 RNA genes, and 29 tRNA genes, with 20 group II introns and one group I intron. There were three pseudo-genes including ${\psi}$-ycf1, ${\psi}$-rps19, and ${\psi}$-trnT_GGU. Eighteen genes, five introns, and parts of two genes and an intron are found within the IR, which has two copies. The cp-DNA of Aster altaicus var. uchiyamae is distinguished from A. spathulifolius, only known cp-genome of the genus Aster, by 172 SNP in genic regions of 43 PCGs and 21 indels in 11 PCGs and SSU. The chloroplast genome sequence was deposited at GenBank (KX35265).

• Journal of Plant Biology
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• 제35권2호
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• pp.165-171
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• 1992

rbcL 유전자 발현조절에 관한 연구의 일환으로 Cp DNA로부터 분리한 rbcL 유전자를 클로닝하였다. 옥수수의 엽록체로부터 DNA를 분리한 후 제한효소 BamHI으로 절단하여 rbcL 유전자가 포함된 BamHI 9 절편을 pUC19에 클로닝하여 재조합 플라스미드 pRLYS1을 만들었다. 쌀의 rbcL 유전자 일부를 probe로 사용하여 pRLYS1과 Southern hybridization한 결과와 제한효소 BamHI, HindIII, 그리고 PstI으로 절단된 pRLYS1 절편의 전기영동 결과로부터 재조합 플라스미드의 내부에 완전한 rbcL 유전자의 존재를 확인하였고 삽입방향을 결정하였다.

• Journal of Plant Biotechnology
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• 제46권4호
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• pp.323-330
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• 2019

The high expression level of industrial and metabolically important proteins in plants can be achieved by plastid transformation. The CaIA vector, a Capsicum-specific vector harboring aadA (spectinomycin resistance), is a selectable marker controlled by the PsbA promoter, and the terminator is flanked by the trnA and trnI regions of the inverted repeat (IR) region of the plastid. The CaIA vector can introduce foreign genes into the IR region of the plastid genome. The biolistic method was used for chloroplast transformation in Scoparia dulcis with leaf explants followed by antibiotic selection on regeneration medium. Transplastomes were successfully screened, and the transformation efficiency of 3 transgenic lines from 25 bombarded leaf explants was determined. Transplastomic lines were evaluated by PCR and Southern blotting for the confirmation of aadA insertion and its integration into the chloroplast genome. Seeds collected from transplastomes were analyzed on spectinomycin medium with wild types to determine genetic stability. The increased chloroplast transformation efficiency (3 transplastomic lines from 25 bombarded explants) would be useful for expressing therapeutically and industrially important genes in Scoparia dulcis L.

• 한국식물학회:학술대회논문집
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• 한국식물학회 1999년도 제13회 식물생명공학심포지움 New Approaches to Understand Gene Function in Plants and Application to Plant Biotechnology
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• pp.79-84
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• 1999

Oxidative stress is one of the major environmental stresses to plants. Reactive oxygen species (ROS) generated during metabolic processes damage cellular functions and consequently lead to cell death. Fortunately plants have in vivo defense system by which the ROS is scavenged by enzymes such as superoxide dismutase (SOD) and ascorbate peroxidase (APX). In attempts to understand the protection mechanism of plant against oxidative stress, we developed transgenic tobacco (Nicotiana tabacum cv. Xanthi) plansts thet expressed both SOD and APX in chloroplast using Agrobacterum-mediated transformation and evaluated their protection capabilities against methyl viologen (MV, paraquat) -mediated oxidative damage. Three double transformants (CAI, CA2, and CA3) expressed the chimeric CuZnSOD and chimeric APX in chloroplast, and one transformant (AM) expressed the chimeric APX and chimeric MnSOD in chloroplast. In addition, we obtained three lines of transformants (C/Al, C/A2, and A/C) that expressed the APX and SOD than control plants, and more resistant to oxidative stress caused by MV. TRansformants (C/A and A/C) overexpressing MnSOD, CuZnSOD and APX at the same time showed the highest resistance to MV-mediated oxidative stress among the transformants.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2018년도 춘계학술발표회
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• pp.38-38
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• 2018

The genus Carduus (Asteraceae), containing ca. 90 species, is mainly distributed in Eurasia and Africa. Carduus species are one of the most hazardous invasive species, which causes serious environmental threats and biodiversity damages in North America. Thus, the member of Carduus are targeted for classical biological control in this region. Here, we provide the complete cp genome of Carduus crispus using next-generation sequencing technology. The size of cp genomes of C. crispus is 152,342 bp. It shows a typical quadripartite structure, consisting of the large single copy (LSC; 83,254 bp), small single copy (SSC; 18,706 bp), separated by a pair of inverted repeats (IRs; 25,191 bp). It contains 115 unique genes of which 21 genes duplicated in the IR regions. The cpSSR regions of Carduus species were searched through the complete chloroplast genome sequence using a tandem repeat search tool in Geneious with the parameters set to ${\geq}7$ mononucleotide repeats, ${\geq}4$ di- and trinucleotide repeats, and ${\geq}3$ tetra-, penta-, and hexanucleotide repeats. A total of 22 repeat motifs were identified, which may be useful for molecular identification of Korean Carduus species (C. cripus), and providing a guideline for its conservation.

• 식물분류학회지
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• 제40권4호
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• pp.208-217
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• 2010

Crossosomatales is a recently recognized order in the rosid II clade with about 64 species in eight morphologically distinct families that have been previously classified in as many as 15 other orders. Phylogenetic relationships among the families and genera within Crossosomatales were investigated using chloroplast atpB, matK, and rbcL sequences employing maximum parsimony, maximum likelihood, and Bayesian methods. The phylogenetic framework was used to examine the patterns of morphological evolution and synapomorphies for subclades within Crossosomatales. The combined data with representative species from all genera in the order strongly supported monophyly of Crossosomatales. Strong support was found for the families in the Southern Hemisphere, in which Aphloiaceae is sister to the clade of (Geissolomataceae, (Ixerbaceae + Strasburgeriaceae)). The sister relationship between the Southern Hemisphere clade and families distributed primarily in the Northern Hemisphere was also supported. As in the previous studies, following relationships were found within the Northern Hemisphere clade: Staphyleaceae is sister to a clade of (Guamatelaceae, (Stachyuraceae + Crossosomataceae)). The pattern analysis indicates that evolutionary pattern of morphological characters is complex, requiring multiple changes within Crossosomatales. Several reproductive traits, such as inflorescence, aril, stigma, and conspicuous protrusion from pollen aperture, corroborate the molecular phylogeny.

• 식물분류학회지
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• 제53권3호
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• pp.237-241
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• 2023

The genus Scrophularia L. (Scrophulariaceae) comprises 200-270 species worldwide and is a taxonomically challenging lineage, displaying morphological diversity and hybridization. S. kakudensis is morphologically similar to the closely related taxa S. kakudensis var. microphylla, S. pilosa, and S. cephalantha. Therefore, the purpose of this study was to sequence the chloroplast (cp) genome of S. kakudensis using next-generation sequencing and compare it to those of related taxa. The complete cp genome sequence of Scrophularia kakudensis was found to be 152,355 bp long, consisting of a pair of inverted repeats of 25,485 bp that separate a large single-copy (LSC) of 83,479 bp from small single-copy regions of 17,909 bp. The cp genome contained 78 protein-coding genes, 30 tRNAs, and four rRNAs. A phylogenetic analysis based on 78 protein-coding genes from six Scrophularia species showed S. kakudensis and S. cephalantha formed with 100% bootstrap values. We compared the complete cp genomes of S. kakudensis and S. cephalantha and identified seven sequence divergence regions: matK/rps16, rps16/trnQ, trnS/trnG, rpoB/trnC, trnS/trnG, rpl32/trnL, and ndhD/psaC. These regions may be useful for determining the phylogenetic relationships among S. kakudensis-related species.

• 식물분류학회지
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• 제53권1호
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• pp.38-46
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• 2023

Chloroplast genomes of two morphologically similar species, Viola selkirkii and V. ulleungdoensis, were compared. For this comparison, three individuals of V. selkirkii from Ulleung-do Island (UE), Jeju-do Island (JJ), and Hwacheon-gun (HC) and one of V. ulleungdoensis from UE were collected. According to chloroplast genome sequencing of V. selkirkii and V. ulleungdoensis, their genomes were found to contain 156,774-157,454 and 157,575 bp, respectively, and a total of 111 genes. In the comparison of the three V. selkirkii individuals, V. selkirkii obtained in UE was distinguished from those of the other regions of HC and JJ, and in the comparison of the three V. selkirkii individuals and one V. ulleungdoensis individual, V. selkirkii obtained from UE and V. ulleungdoensis were distinguished from the species in the other regions. In addition, a phylogenetic analysis revealed that 32 taxa of Viola formed a monophyletic group (bootstrap support [BS] = 100). The four Viola individuals used in this study (three V. selkirkii and one V. ulleungdoensis) formed a monophyletic group (BS = 100), which was further divided into two subclades. One subclade comprised V. selkirkii found in UE and V. ulleungdoensis, whereas the other subclade comprised V. selkirkii found in HC and JJ. These results support the view of prior studies that V. selkirkii growing in UE and V. ulleungdoensis are the same species.