• 제목/요약/키워드: cag A

검색결과 116건 처리시간 0.028초

Antioxidant and ACE Inhibitory Activity of Cultivated and Wild Angelica gigas Nakai Extracts Prepared Using Different Extraction Conditions

  • Noh, Bo-Young;Lee, Hye-Jin;Do, Jeong-Ryong;Kim, Hyun-Ku
    • Preventive Nutrition and Food Science
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    • 제19권4호
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    • pp.274-280
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    • 2014
  • The purpose of this study was to investigate the biological activities of cultivated Angelica gigas Nakai (CAG) and wild Angelica gigas Nakai (WAG) extracts prepared by extraction with water, 30% ethanol, 60% ethanol, or 90% ethanol. The electron donating ability of the WAG extracts was higher than that of the CAG extracts and 0.1% and 1.0% solutions of the comparative substance, L-ascorbic acid. The superoxide dismutase-like activity of the CAG extracts was higher than that of WAG extracts. Superoxide dismutase-like activity was highest (33.95%) in the CAG water extract. The total polyphenol content was highest in the 60% ethanol extracts of WAG. The nitrite scavenging ability of the CAG and WAG extracts was highest at a pH of 1.2. The tyrosinase inhibitory effect was highest (43.72%) in the water extract of WAG. The angiotensin converting enzyme inhibitory activity was highest (83.84%) in the 60% ethanol extract of WAG. The results of the present study will be useful for understanding the antioxidant and angiotensin-converting enzyme inhibitory activities of Angelica gigas Nakai extracts.

Zerumbone 처리에 따른 Helicobacter pylori의 단백질 비교분석 (Comparative Proteome Analysis of Zerumbone-treated Helicobacter pylori)

  • 김사현
    • 대한임상검사과학회지
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    • 제50권3호
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    • pp.275-283
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    • 2018
  • Helicobacter pylori는 만성 위염, 위궤양 또는 위 선암을 비롯한 다양한 위장병의 원인균으로 알려져 있으며, 이 세균이 분비하는 cytotoxin-associated protein A (CagA), vacuolating cytotoxic protein A (VacA)와 같은 병원성 인자가 그 원인으로 알려져 있다. 본 연구에서는 zerumbone이 CagA, VacA를 비롯한 다양한 H. pylori의 병원성 인자들의 단백 발현양 변화에 정성적, 정량적으로 어떠한 영향을 미치는지 분석하였다. H. pylori 60190 (VacA 양성 / CagA 양성; Eastern type) 표준균주를 대상으로 하여 약 200개의 유의미한 단백을 선별한 후, 그 중에서 임상적으로 의의가 큰 13개 단백 분자에 대한 프로테옴 분석을 수행하였다. 이차원 전기 영동법(2 dimensional electrophoresis, 2-DE) 수행 후, 단백질 스팟의 정량적 측정에는 ImageMasterTM 2-DE Platinum 소프트웨어를 사용하였고, 단백 동정에는 matrix-assisted laser desorption/ionization-mass spectrometry (MALDI-TOF-MS)와 liquid chromatography-mass spectrometry/mass spectrometry (LC-MS/MS)를 사용하였다. 동정이 완료된 전체 단백 중에서 유의미한 변화를 보인 단백을 집중적으로 분석한 뒤에 필요에 따라 reverse transcription -polymerase chanin reaction을 수행하여 결과를 추가 검증하였다. 본 연구에서는 zerumbone이 보유한 새로운 약리학적 활성 기전을 스크리닝함으로써 향후 zerumbone이 H. pylori 감염증 치료제로서 어떠한 의미를 지니는지 규명하고자 하였다.

2배체 대장균의 제조와 그 특성 (Construction and characterization of heterozygous diploid Escherichia coli)

  • 정혜임;임동빈
    • 미생물학회지
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    • 제52권4호
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    • pp.406-414
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    • 2016
  • 대장균에서 6개의 Leu 코돈중 가장 흔한 코돈은 CUG이다. 이 코돈을 인식하는 tRNA는 4개의 유전자에 의해 합성되는데, leuPQV와 leuT 2개의 locus로 나누어져 있다. 이 CUG를 인식하는 모든 tRNA가 결핍된 균주를 만들기 위해, 우선 leuPQV가 삭제된 균주(${\Delta}leuPQV$)와, leuT의 anticodon CAG를 GAG로 돌연변이시킨 균주[$Km^R$, $leuT^*$(GAG)]를 각각 만들었다. 이 두 돌연변이 유전자를 모으기 위해 ${\Delta}leuPQV$ 균주를 recipient로, $leuT^*$(GAG) 균주를 donor로하는 transduction을 수행한 결과, 콜로니 크기가 큰 것과 작은 것 두 종류의 transductant를 얻었다. PCR 후 염기서열 분석 결과 큰 콜로니는 예측한 recombinant로 판명됐으나, 작은 콜로니는 donor와 recipient 염색체 간의 상호교환재조합(reciprocal recombination)으로는 설명이 되지 않는, 돌연변이 유전자[$leuT^*$(GAG)]와 야생형 유전자(leuT(CAG)]를 모두 가진 균주로 밝혀졌다. 이 heterozygous diploid는 광학현미경으로 관찰시 세포의 형태와 크기에서 특이점이 발견되지 않았으나, 영양배지에서 야생형에 비해 생장이 한참 느리면서, 선형생장곡선(linear growth curve)이라는 예측하지 못한 생장특성을 보였다. 이 2배체 균주는 선택배지에서는 항상 작은 균일한 콜로니를 형성하였으나, 배지에 선택항생제 없을 경우, $leuT^*$(GAG) 유전자형 세포와 leuT(CAG) 유전자형 세포로 분리가 일어났다. 우리의 결과를 종합해볼 때, 이 2배체 균주는, $leuT^*$(GAG)와 leuT(CAG) 부분만 2배체로 갖는 부분이배체(merodiploid)라기 보다는, $leuT^*$(GAG)와 leuT(CAG)가 서로 다른 염색체에 있는 완전이배체라는 모델을 지지했다. 우리는 이러한 2배체가 어떻게 생성되었으며, 어떻게 분리되는지, 또 이 균주는 왜 선형생장곡선을 보이는지 등에 대한 모델을 토론하였다.

Virulence Genes of Helicobacter pylori in Gastritis, Peptic Ulcer and Gastric Cancer in Laos

  • Vannarath, Sengdao;Vilaichone, Ratha-Korn;Rasachak, Bouachanh;Mairiang, Pisaln;Yamaoka, Yoshio;Shiota, Seiji;Binh, Tran Thanh;Mahachai, Varocha
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권20호
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    • pp.9027-9031
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    • 2014
  • Background: Helicobacter pylori (H. pylori) infection is an established cause of peptic ulcers and gastric cancer. The aim of this study was to identify H. pylori genotypes and to examine their associations with geographical regions and gastritis, peptic ulcers and gastric cancer in Laos. Materials and Methods: A total of 329 Lao dyspeptic patients who underwent gastroscopy at Mahosot Hospital, Vientiane, Laos during December 2010 - March 2012 were enrolled. Two biopsy specimens (one each from the antrum and corpus) were obtained for CLO testing and only CLO test-positive gastric tissue were used to extract DNA. PCR and sequencing were identified for variants of the cagA and vacA genotypes. Results: Some 119 Laos patients (36.2%) were found to be infected with H. pylori including 83 with gastritis, 13 with gastric ulcers (GU), 20 with duodenal ulcers (DU) and 3 with gastric cancer. cagA was detected in 99.2%. East-Asian-type cagA (62%) and vacA s1c (64.7%) were predominant genotypes in Laos. vacA s1c-m1b was significantly higher in GU than gastritis (53.8% vs. 24.1%; P-value=0.04) whereas vacA s1a-m2 was significantly higher in DU than gastritis (40.0% vs. 16.9%; P-value=0.03). East-Asian-type cagA and vacA s1c were significantly higher in highland than lowland Lao (100% vs. 55.8%; P-value=0.001 and 88.2% vs. 61.5%, P-value=0.03 respectively). Conclusions: H. pylori is a common infection in Laos, as in other countries in Southeast Asia. The cagA gene was demonstrated in nearly all Laos patients, cagA and vacA genotypes being possible important factors in explaining H. pylori infection and disease outcomes in Laos.

In Silico Interaction and Docking Studies Indicate a New Mechanism for PML Dysfunction in Gastric Cancer and Suggest Imatinib as a Drug to Restore Function

  • Imani-Saber, Zeinab;Ghafouri-Fard, Soudeh
    • Asian Pacific Journal of Cancer Prevention
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    • 제16권12호
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    • pp.5005-5006
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    • 2015
  • Gastric cancer as one of the most common cancers worldwide has various genetic and environmental risk factors including Helicobacter pylori (H.pylori) infection. Recently, loss of a tumor suppressor gene named promyelocytic leukemia (PML) has been identified in gastric cancer. However, no mutation has been found in this gene in gastric cancer samples. Cag A H.pylori protein has been shown to exert post transcriptional regulation of some tumor suppressor genes. In order to assess such a mechanism for PML degradation, we performed in silico analyses to establish any interaction between PML and Cag A proteins. In silico interaction and docking studies showed that these two proteins may have stable interactions. In addition, we showed that imatinib kinase inhibitor can restore PML function by inhibition of casein kinase 2.

Genetic Distances of Crucian Carp Populations analyzed by PCR Approach

  • Jeon, Jun-Hyub;Yoon, Jong-Man
    • 한국발생생물학회지:발생과생식
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    • 제20권2호
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    • pp.135-140
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    • 2016
  • Genomic DNAs isolated from crucian carp of four rivers, belonging to the family Cyprinidae was amplified by seven oligonucleotides primers. In the present study, we employed hierarchical clustering method in order to reveal genetic distances and variations. Crucian carp was acquired from Hangang river (CAH), Geumgang river (CAG), Nakdonggang river (CAN) and Yeongsangang river (CAY). The primer BION-12 generated the most loci (a total of 50) with an average of 10 in the CAY population. The primer BION-10 generated the least loci (a total of 19), with an average of 3.8 in the CAG population, in comparison to the other primers used. Seven oligonucleotides primers made 16.7 average no. per primer of specific loci in the CAH population, 7.4 in the CAG population, 8.6 in the CAN population and 0.9 in the CAY population, respectively. The specific loci generated by oligonucleotides primers revealed inter-individual-specific characteristics, thus disclosing DNA polymorphisms. The dendrogram obtained by the seven oligonucleotides primers indicates four genetic clusters. The genetic distance that displayed significant molecular differences was between individuals no.06 and no.08 from the CAG population (genetic distance = 0.036), while the genetic distance among the five individuals that displayed significant molecular differences was between individuals no.08 and no.09 from the CAG population (genetic distance = 0.088). With regard to average bandsharing value (BS) results, individuals from CAY population ($0.985{\pm}0.009$) exhibited higher bandsharing values than did individuals from CAH population ($0.779{\pm}0.049$) (P<0.05). Relatively, individuals of CAY population were fairly closely related to that of CAN location (genetic distance between two populations<0.016).

관상동맥 조영술 및 경피적 관상동맥 중재술에 대한 진단참고준위에 관한 연구; 경상도지역중심 (A Study of Diagnostic Reference Levels for Coronary Angiography and Percutaneous Coronary Intervention in Gyeongsang Area)

  • 임시왕;김정수;조평곤
    • 대한방사선기술학회지:방사선기술과학
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    • 제46권2호
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    • pp.123-129
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    • 2023
  • Interventional cardiology procedures can involve relatively high radiation doses compared to conventional radiography. During CAG, CAG + PCI and PCI the same area is exposed to radiation for a long period. In this study, radiation exposure data of 421 examinations in Gyeongsang area were collected, and the DRLs and ADs in actual medical practice for three types of interventional cardiology procedures in Korea were established. In CAG 286 case, 75th percentile DRLs and ADs of the total DAP were 55.89 Gy·cm2 and 37.47 Gy·cm2 , respectively. In CAG + PCI 92 case, those values were 222.84 Gy·cm2 and 117.51 Gy·cm2 respectively. In PCI 43 case, those values were 198.73 Gy·cm2 and 120.13 Gy·cm2 respectively. In this study, for the first time, the diagnostic reference level of interventional cardiology procedures in Gyeongsang area were established. Using the diagnostic reference level of interventional cardiology procedures derived from this study, it will help to identify and improve the level of exposure dose in the region and country.

순수 소뇌실조증의 임상 양상으로 SCA 1의 과도한 CAG 반복서열을 보인 유전성 소뇌실조증 가족 1례 (Pure Cerebellar Ataxia Presenting in the SCA 1)

  • 송은향;이정석;김우정;김두응
    • Annals of Clinical Neurophysiology
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    • 제3권2호
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    • pp.151-155
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    • 2001
  • SCA 1 is an autosomal dominant disorder. The phenotypic manifestations of SCA 1 are not specific, and thus, the diagnosis of SCA 1 rests on molecular genetic testing. The number of CAG repeats ranges from 6-44 in normal alleles and from 39-81 repeats in disease-causing alleles(chromosomal locus 6p22-23). The main clinical features of SCA 1 are ataxia, dysarthria, ophthalmoparesis, extrapyramidal signs without retinal degeneration. A 24-year-old woman with suspected family history presented with progressive cerebellar ataxia, dysarthria, ptosis, titubation and general weakness. Brain MRI revealed a moderate cerebellar atrophy. A genomic polymerase chain reaction(PCR) analysis showed 66 repeats at the SCA 1 locus.

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Distinct Genetic Variation of Helicobacter pylori cagA, vacA, oipA, and sabA Genes in Thai and Korean Dyspeptic Patients

  • Boonyanugomol, Wongwarut;Kongkasame, Worrarat;Palittapongarnpim, Prasit;Jung, Myunghwan;Shin, Min-Kyoung;Kang, Hyung-Lyun;Baik, Seung-Chul;Lee, Woo-Kon;Cho, Myung-Je
    • 한국미생물·생명공학회지
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    • 제46권3호
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    • pp.261-268
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    • 2018
  • Differences in host ethnicities and geographical distributions may influence the genetic variation and pathogenesis of Helicobacter pylori strains, particularly with respect to those with a high risk of gastric cancer and in Asian Enigma regions. We simultaneously identified H. pylori virulence-associated genes involved in inflammation and cell damage in Thai and Korean dyspeptic patients. The virulence-associated gene cagA, cagA genotypes (East Asian and Western type cagA), vacA genotypes (s- and m-), oipA, and sabA were detected in Thai and Korean dyspeptic patients by polymerase chain reaction (PCR), real-time PCR, and DNA sequence analysis. Comparisons between the two regions showed that cagA, East Asian type cagA, and vacA s1/m1 in Korean dyspeptic patients occurred at rates of 100%, 86.67%, and 88.89%, respectively (p < 0.05). The oipA- and sabA-positive samples were significantly more predominant in the Korean population (95.56%, 91.11%) than in the Thai population (32%, 34%). DNA sequence analysis revealed differences in the patterns of cytosine-thymine dinucleotide repeats of oipA and sabA among the two populations of dyspeptic patients. Our results indicate that the H. pylori strains detected in the two regions were divergent, and strains colonizing the Korean dyspeptic patients may be more virulent than those in the Thai population. Our data may help explain H. pylori pathogenesis in Asian Enigma areas with a low gastric cancer incidence. However, other factors involving H. pylori infection in these two regions should be further analyzed.

소아 Helicobacter pylori 감염에서 균의 유전형, 위 상피세포의 증식과 세포사 (The Genotypes of Helicobacter pylori, Gastric Epithelial Cell Proliferation and Apoptosis in Children)

  • 정지아;이미애;서정완
    • Pediatric Gastroenterology, Hepatology & Nutrition
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    • 제6권1호
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    • pp.1-9
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    • 2003
  • 목 적: Helicobacter pylori (H. pylori)에 의한 질병 발생의 병독 인자로 cagA, picB 및 iceA 등의 유전형이 연구되고 있으며, 최근에는 위 상피세포의 증식(proliferation)과 세포사(apoptosis)의 불균형이 중요시되고 있다. 이에 H. pylori 감염 소아에서 위 상피세포 증식과 세포사 및 cagA, picB 및 iceA 유전형의 관련성을 알아보고자 하였다. 방 법: 1999년 8월부터 2001년 6월까지 이화여자 대학교 목동병원 소아과에서 소화기 증상으로 내시경을 시행하여 H. pylori 감염으로 진단된 20예와 감염 음성 20예를 대상으로 하였다. H. pylori 감염 양성은 조직학적으로 H. pylori 균이 관찰되고, CLO 검사와 ureC PCR이 전부 양성인 경우로 하였다. 위생검 조직에서 개정된 시드니 체계를 이용하여 조직 소견을 분석하고, proliferating cell nuclear antigen (PCNA) 발현으로 위 상피세포 증식의 정도를 in situ terminal deoxynucleotidyl transferase-mediated dUTP nick-end labeling (TUNEL) 방법으로 세포사의 정도를 조사하였다. cagA, picB 및 iceA 유전자에 대해 중합효소연쇄반응을 시행하였다. 결 과: 1) 세포 증식 지표는 H. pylori 감염 양성에서 $77.4{\pm}13.12$로 음성 $52.3{\pm}12.20$에 비하여 유의하게 높았다(p=0.000). 세포 증식 지표는 H. pylori 밀도가 증가할수록(r=0.624, p=0.000, 다핵형 중성구의 활동성이 증가할수록(r=0.460, p=0.005), 만성 염증이 증가할수록(r=0.433, p=0.009) 증가하였다. 2) 세포사 지표는 H. pylori 감염 양성에서 $0.70{\pm}0.411$, 음성에서 $0.14{\pm}0.201$로 감염 양성에서 음성보다 유의하게 높았다(p=0.000). 세포사 지표는 H.pylori 밀도가 증가할수록(r=0.691, p=0.000), 다핵형 중성구의 활동성이 증가할수록(r=0.585, p=0.000), 만성 염증이 증가할수록(r=0.535, p=0.001) 증가하였다. 3) 세포 증식 지표가 증가할수록 세포사 지표는 유의하게 증가하였다(r=0.527, p=0.001). 4) H. pylori 감염 양성에서 유전형의 양성률은 cagA 90%, picB 75%, iceA1 60% 및 iceA2 15%였으며, cagA, picB, 및 iceA 유전형에 따른 세포 증식지표, 세포사 지표, 내시경 소견 및 조직 소견에는 유의한 차이가 없었다. 결 론: H. pylori 감염 소아에서 위 상피세포 증식 지표와 세포사 지표가 균형을 이루면서 증가하였으며, cagA, pic B 및 iceA 유전형에 따른 유의한 차이는 없었다. 이는 위 상피세포 증식과 세포사가 H. pylori의 병인에 중요함을 시사하며, 앞으로 세포 증식과 세포사의 기전과 유발 요인, 여러 유전형과의 관계, 성인과의 비교 연구 등이 필요하리라 생각된다.

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