• 제목/요약/키워드: breeding population

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Evaluation of selection program by assessing the genetic diversity and inbreeding effects on Nellore sheep growth through pedigree analysis

  • Illa, Satish Kumar;Gollamoori, Gangaraju;Nath, Sapna
    • Asian-Australasian Journal of Animal Sciences
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    • 제33권9호
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    • pp.1369-1377
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    • 2020
  • Objective: The main objectives of the present study were to assess the genetic diversity, population structure and to appraise the efficiency of ongoing selective breeding program in the closed nucleus herd of Nellore sheep through pedigree analysis. Methods: Information utilized in the study was collected from the pedigree records of Livestock Research Station, Palamaner during the period from 1989 to 2016. Genealogical parameters like generation interval, pedigree completeness, inbreeding level, average relatedness among the animals and genetic conservation index were estimated based on gene origin probabilities. Lambs born during 2012 and 2016 were considered as reference population. Two animal models either with the use of Fi or ΔFi as linear co-variables were evaluated to know the effects of inbreeding on the growth traits of Nellore sheep. Results: Average generation interval and realized effective population size for the reference cohort were estimated as 3.38±0.10 and 91.56±1.58, respectively and the average inbreeding coefficient for reference population was 3.32%. Similarly, the effective number of founders, ancestors and founder genome equivalent of the reference population were observed as 47, 37, and 22.48, respectively. Fifty per cent of the genetic variability was explained by 14 influential ancestors in the reference cohort. The ratio fe/fa obtained in the study was 1.21, which is an indicator of bottlenecks in the population. The number of equivalent generations obtained in the study was 4.23 and this estimate suggested the fair depth of the pedigree. Conclusion: Study suggested that the population had decent levels of genetic diversity and a non-significant influence of inbreeding coefficient on growth traits of Nellore lambs. However, small portion of genetic diversity was lost due to a disproportionate contribution of founders and bottlenecks. Hence, breeding strategies which improve the genetic gain, widens the selection process and with optimum levels of inbreeding are recommended for the herd.

개발지역의 서식지 훼손에 따른 백로류 종별 개체군 변화 (Population Change of Each Ardeidae Species in Damaged Habitats of Development Area)

  • 이상기;김남춘;신지훈
    • 한국환경복원기술학회지
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    • 제17권1호
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    • pp.147-162
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    • 2014
  • This study aims to provide the biological and geographical materials to identify the changes in population of Family Ardeidae included Egretta alba modesta, Egretta garzetta, Bubulcus ibis, and Nycticorax nycticorax and establish their conservation measurement in terms of the fragmented and deteriorated habitat by human development such as housing and park projects. Wonjucheon Stream was measured the highest species diversity since the survey site was relatively less interfered by the surrounding human beings showing lower disturbance elements. However, the closer the stream comes downstream, the more the artificial disturbance elements generate, confirming that the species better adapted to contamination grow in more density so that the species composition becomes simplified. It implies that feeding place as well as breeding-growing places is also more closely related to the changes in population structure and species composition of Family Ardeidae. The results of Family Ardeidae immigration in Taejang-dong, Wonju, among the other survey sites, revealed that a total of 231 came to the site in 2006; and 210 in 2011, showing more or less reduction in the population. In the mean while, Namyang-dong in Hwaseong City showed the continuous decrease in population number of Family Ardeidae with 135 before development and 60 during development, resulting in the number never growing but continuously narrowing over and over after development. As a result of surveying the number of Family Ardeidae that bred following the findings above, Taejang-dong in Wonju City had 4 species of Family Ardeidae being bred, however, showing the decrease in number of population from 998 in 2006 to 589 in 2011. Namyang-dong in Hwaseong was confirmed to have as many as 352 of the population in 2006 and 230 in 2008; after the deforestation on their habitat, they had not lived in the site any longer, suggesting that the development would significantly affect Family Ardeidae.

QTL Mapping of Agronomic Traits in an Advanced Backcross Population from a Cross between Oryza sativa L. cv. Milyang 23 and O. glaberrima

  • Kang, Ju-Won;Suh, Jung-Pil;Kim, Dong-Min;Oh, Chang-Sik;Oh, Ji-Min;Ahn, Sang-Nag
    • 한국육종학회지
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    • 제40권3호
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    • pp.243-249
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    • 2008
  • In the previous study, 141 $BC_3F_2$ lines from a cross between the Oryza sativa cv. Milyang 23 and O. glaberrima were used to identify favorable wild QTL alleles for yield component traits. In this study, we carried out QTL analysis of four grain morphology as well as four yield component traits using 141 $BC_3F_5$ lines from the same cross and compared QTLs detected in two different generations. The mean number of O. glaberrima segments in the 141 $BC_3F_5$ lines ranged from 1 to 13 with 2.69 and 5.71 of the average means of homozygous and heterozygous segments, respectively. There was a three-fold difference in the number of QTLs detected for four traits commonly evaluated in two generations (seven QTLs in the $BC_3F_5$ vs 21 in the $BC_3F_2$ population). The percentages of the phenotypic variance explained by QTLs in the BC3F5 population were similar to or less than those in the $BC_3F_2$ population. This is probably due to the difference in the genetic composition of two populations and the environmental effects. The locations of the QTLs commonly detected in both generations were in good agreement except for one QTL for spikelets per panicle. The yield QTL, yd3 was colocalized with the spikelets per panicle, spp3. Yield increase at this locus is due to the increase in spikelets per panicle, because both traits were associated with increase in spikelets per panicle and yield due to the presence of an O. glaberrima allele. Clusters of QTLs for grain morphology traits were observed in two chromosome regions. One cluster harboring five QTLs near SSR markers RM106 and RM263 was detected on chromosome 2. This population would serve as a foundation for development of the introgression line population from a cross between Milyang 23 and O. glaberrima.

고유종 꼬리말발도리의 생식특성과 동위효소 유전다양성 (Breeding System and Allozyme Genetic Diversity of Deutzia paniculata Nakai, an Endemic Shrub in Korea)

  • 장진성;김휘
    • 한국산림과학회지
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    • 제103권4호
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    • pp.519-527
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    • 2014
  • 고유식물인 꼬리말발도리는 팔공산, 달음산, 가지산과 운문산 등 경상남북도에 제한적으로 분포한다. 본 연구대상인 4개 집단의 크기는 달음산의 최소 100개체에서 운문산 집단이 최대 3,500개체까지이다. 인공수분실험 결과, 생식양식은 완전 타가수분이며, 주요 관찰 화분매개자는 Lasioglossum exiliceps (Vachal)과 호리꽃등에 [Allograpta balteata (de Geer)]였다. 동위효소로 유전적 다양성을 측정한 결과, 종 수준에서의 평균적인 유전다양성은 유전자좌 당 평균 대립유전자수($A_s$)는 1.33, 유전다양성($H_{es}$)은 0.110으로 이미 보고된 고유식물종의 유전다양성과 비슷한 값을 보였다. 달음산 집단은 모든 개체에서 동일한 유전적 조성을 보였으며, 이 집단의 전체 개체가 클론으로 추정된다. 유전자좌의 비율(P)과 유전자좌당 평균 대립유전자($A_P$)의 수는 팔공산 집단이 가장 높았다. 집단 간의 전체 유전 고정지수($F_{IT}$)는 집단 내 지수($F_{IS}$)보다 높아 집단 내 이형접합자의 비율은 높지만, 종 전체 이형접합자 부족현상이 확인되었다. 집단 간의 유전적 분화의 정도를 나타내는 $F_{ST}$값은 0.223, 각 집단 간의 유전적 거리는 평균 0.047(0.011-0.066)로 단형성을 갖는 유전자가 많아 실제 분화는 일부 유전자좌에 국한된 결과이다. 꼬리말발도리의 유전다양성의 감소는 집단의 유효집단 크기 감소와 관련이 있으며, 현지내의 생육지 보전과 함께 현지외 보전을 위해 각 집단별로 최대 유전 다양성을 확보하는 전략이 필요하다.

황색종 연초의 세균성마름병 저항성품종 육성을 위한 육종방법 비교 (COMPARISON OF VARIABILITY IN BREEDING METHODS FOR RESISTANCE TO BACTERIAL WILT IN FLUE-CURED TOBACCO)

  • 진정의;고미석
    • 한국연초학회지
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    • 제9권2호
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    • pp.11-24
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    • 1987
  • Lines were developed from the two crosses, BY4 X NC 82 and BY 4 X BY 104, by bulk, backcross and anther-derived dihaploid methods of breeding , and their variations in major agronomic, chemical characters, heritability, and response to selection were compared. 1. The anther-derived dihaploid lines showed a greater genetic variability and heritability in characters investigated than the lines developed by the other two methods of breeding . However, those were Inferior In agronomic characters and yielded 15.4% less leaf tobacco than the lines developed by the bulk method. 2. The lines developed by bulk method were higher In the frequency of lines resistant to bacterial wilt and in the yield, but Its lines appeared later flowering. inferior leaf Quality, and higher total nitrogen contents than those developed by the backcross method of breeding. 3. In the population of the lines developed by the backcross method, bacterial wilt resistant lines were less frequent, but the lines with a good leaf quality were more frequent.

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Influence of roadkill during breeding migration on the sex ratio of land crab (Sesarma haematoche)

  • Ryu, Mi;Kim, Jae Geun
    • Journal of Ecology and Environment
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    • 제44권4호
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    • pp.207-211
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    • 2020
  • Adult land crabs generally live on land while their larvae live in the sea. In the case of Sesarma haematoche, female crabs migrate from land to sea to release the larvae at the high tide of syzygy night. Artificial structures along coastal areas are being obstacles for the migration of land crabs and causing synchronized roadkills on coastal roads during breeding migration. In this research, we compared the sex ratios of crab populations in coastal areas with coastal roads and uninhabited island areas with no road. The proportion of females in inland habitats with coastal roads was significantly smaller than island habitats. In particular, females are exposed to the risk of annually repeated roadkills, and the proportion of females decreases rapidly with their growth. If this tendency is general for land crab populations in the coastal areas with roads, significant road mortality of female land crabs during breeding migration can lead to severe population decline in coastal areas. Therefore, it is necessary to take an action to save land crabs crossing coastal roads.

Evaluation of Sequential Planting Method for Screening of Durable Resistance against Rice Blast in Rice Breeding Program

  • Goh, Jaeduk;Kim, Byoung-Ryun;Shin, Dong Bum;Kang, In Jeong;Lee, Bong Choon;Kang, Hang-Won;Han, Seong-Sook
    • 식물병연구
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    • 제21권1호
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    • pp.20-23
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    • 2015
  • A sequential planting method was developed to screen rice plants with durable resistance against rice blast in a short time, and applied for several years in Korean rice breeding program. In this study, we showed the advantages of a sequential planting method compared to other pathogenicity tests. The correlation analysis among three pathogenicity tests and other factors demonstrated that durable resistance depended on the average of diseased leaf area and the number of compatible pathogens. Significant correlations were found in the nursery test but not in the field test result. In addition, we traced changes in the pathogen population during sequential planting stages through re-isolation of the pathogen. The portion of compatible pathogens was increased during sequential planting. Through this study, we provide an effective sequential planting method and direction of durable resistance in a breeding program.

Inheritance of Anthracnose Resistance in a New Genetic Resource, Capsicum baccatum PI594137

  • Kim, Sang-Hoon;Yoon, Jae-Bok;Park, Hyo-Guen
    • Journal of Crop Science and Biotechnology
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    • 제11권1호
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    • pp.13-16
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    • 2008
  • Pepper fruit anthracnose caused by Colletotrichum species is an economically important disease that causes serious yield loss and quality deterioration in many Asian countries including South Korea and Taiwan. Recently, Capsicum baccatum PI594137 was found to exhibit broad-spectrum resistance to Colletotrichum acutatum. The inheritance of anthracnose resistance to C. acutatum was analyzed in an intraspecific population derived from a cross between C. baccatum Golden-aji and PI594137. Detached mature green fruits were inoculated using the microinjection method. The disease response was evaluated as the disease incidence and the overall lesion diameter at 7 days after inoculation(DAI). The segregation ratios of resistance and susceptibility to C. acutatum in the $F_2$ and $BC_s$ populations significantly fit a 3:1 Mendelian model. This result indicates that the resistance of PI594137 to C. acutatum is controlled by a single dominant gene.

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Growth, Fecundity, Egg Size and Recruitment of Palaemon serrifer (Decapoda: Caridea: Palaemonidae)

  • Kim, Sung-Han
    • Journal of Ecology and Environment
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    • 제31권1호
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    • pp.9-15
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    • 2008
  • Growth and reproduction of Palaemon serrifer were described and analyzed in a population inhabiting tide pools in warm temperate waters in Korea. The water temperature varied greatly in the tide pools, ranging from 8$^{\circ}C$ to 27.8$^{\circ}C$ Population structure and growth were investigated using size frequency distribution data collected from January to December 2003. Sex ratios fluctuated, but were almost equal during the breeding period. Growth was continuous and size increased gradually throughout the year. Adult females were larger and grew faster than males. von Bertalanffy growth parameters for a one-year sample of females and males were estimated as $L_{i\ddot{A}}$ = 11.32, K = 0.311, $t_0$ = -0.4115 and $L_{i\ddot{A}}$ = 8.36, K = 0.228, $t_0$ = -0.9693 respectively. Breeding was seasonal, starting in May, peaking in August, and finishing by the end of August. The species showed continuous production of successive broods. Laboratory observation showed that females with embryos near hatching had ovaries filled with vitellogenic oocytes ready for spawning. The reproductive output (effort) of each female (mean number of eggs: $552{\sim}1355$) was not high. The mean embryo volume, $0.078mm^3$, is relatively small, indicative of low energy allocation to each embryo. Recruitment of juveniles was closely linked to the breeding period, beginning in September.

Breeding and Production Research Direction for Soybean Self-Sufficiency Improvement in Korea

  • Jee-Yeon Ko;Beom-Kyu Kang;Jeong-Hyun Seo;Jun-Hoi Kim;Su-Vin Heo;Man-Soo Choi;Jae-Bok Hwang ;Choon-Song Kim;Myeong-Gyu Oh
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2022년도 추계학술대회
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    • pp.23-23
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    • 2022
  • Recently, soybean production and market price are unstable, even if demand of soybean is maintained. Diverse conditions such as climate change, a decrease in rural population, and consuming affect food industry. In this situation, food security is soaring as important key-word again, and MAFRA is promoting policies for improving soybean self-sufficiency with the goal of 40% until 2030. The point of policy is to extend a production and stabilize a demand for soybean with supporting large-scale soybean paddy-field complex. According to the background, soybean breeding and production research in NICS are proceeded with three parts. First, production improvement with soybean cultivation land enlargement and high-yield cultivar development. Various growth period soybean cultivars for double cropping, irrigation management technologies in paddy field, and hyper-yield and specific-region adaptable cultivar development. Second, reduction of production expense with mechanized cultivation and digital-based field management technologies. Third, consumer-friendly and high quality soybeans with high protein cultivar for alternative protein usage and high food process-ability for soy milk, tofu, soybean sprouts, and grain usage. Each part need to be combined and advanced to improve soybean industry and soybean self-sufficiency.

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