• Journal of Applied Biological Chemistry
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• 제54권1호
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• pp.1-6
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• 2011

Poly-${\gamma}$-glutamic acid (${\gamma}$-PGA)는 청국장이 발효할 때 생성되는 점질성 물질의 하나로, monomer glutamic acid의 ${\alpha}$-아미노기와 ${\gamma}$-카르복실기 사이의 amide linkage에 의해 결합된 D(-)와 L(-) glutamic acid repeat units로 이루어진 homopolymer이다. 주로 Bacillus sp.에 의해 생산된다. ${\gamma}$-PGA는 수용성, 음이온성, 무독성, 생분해성, 생체적 합성, 식용 등의 다양한 특성을 가지고 있기 때문에 여러 분야에서 응용되고 있다. 본 실험에서 ${\gamma}$-PGA를 생산하는 균주를 우리나라의 전통발효식품인 청국장으로부터 분리하였다. 분리균주의 형태 및 배양학적, 생리학적 특성, API kit 및 16S rRNA 서열을 사용하여 동정한 결과, 분리균주 GS-2는 B. subtilis와 가장 유사하여 B. subtilis GS-2로 명명하였다. 분리 정제된 ${\gamma}$-PGA의 동정은 TLC, HPLC, FTIR 그리고 $^1H$-NMR spectroscopy를 통하여 확인하였다.

• 한국토양비료학회지
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• 제27권1호
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• pp.40-47
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• 1994

담수(湛水)된 고유기물(高有機物) 논토양에서의 ammonium thiosulfate(ATS)의 urease 활성(活性) 억제(抑制) 효과(效果)와 토양의 생물학적 활성 및 화학적 성질에 미치는 영향을 조사하고, ATS의 효과를 sodium thiosulfate(STS)와 비교하고 유기물 처리의 영향을 검토한 결과를 요약하면 다음과 같다. 1. Thiosulfate의 urease 활성 저해 효과는 3~5일후부터 나타났다. glucose 첨가구에서는 STS 처리가 ATS보다 효과가 다소 컸고, glucose를 첨가하지 않았을 때에는 처리 효과가 비슷하였다. 2. Thiosulfate 처리구의 pH는 초기에 높아지다가 glucose 무첨가시에는 10일 이후 낮아졌고, glucose 첨가시에는 15일 이후 낮아졌다. Eh는 thiosulfate 처리에 의하여 대체로 낮아졌다. 3. Thiosulfate 처리구에서 acet 산(酸)과 butyr 산(酸)은 소량($10{\mu}g/g$ 이하) 검출되었으므로, thiosulfate 처리에 의해 수도(水稻)의 생육이 저해되지는 않을 것이라 추정된다. 4. Glucose를 첨가하지 않았을 때에는 thiosulfate 처리에 의해 $CO_2$ 발생량이 증가하여 토양 생물의 활성을 높였다고 해석된다.

• 한국물환경학회지
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• 제34권2호
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• pp.183-201
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• 2018

The tolerance of Korean benthic macroinvertebrates to organic pollution has been analyzed since the early 1990s. However, considering the fact that there have been related studies carried out in some European countries since the early 20th century, the history of the research in Korea is very short and there is still much knowledge to supplement. We revised the saprobic valency, the saprobic value and the indicator weight value of 190 benthic macroinvertebrates taxa through the data of water quality and individual abundance collected from 7,086 sampling units in Korea from 2008 to 2014. The individual abundance of Uracanthella (Ephemeroptera) as a representative, one of the most common and abundant taxa in Korea, showed a typical lognormal distribution to 5-day biochemical oxygen demand (BOD5) concentration, and a normal distribution to the class interval of BOD5 concentration according to saprobic series. The value combining the mean individual abundance and the relative frequency of occurrence was a more efficient indicator value than that of each property alone. Benthic Macroinertebrates Index (BMI) was newly proposed as a modification of the saprobic index of Zelinka and Marvan (1961). BMI showed extremely significant correlation (determination coefficient $r^2$ > 0.6, n = 569 sites) with the concentration of BOD5, and the coefficient was a little higher than those of the previous indices. Until now, there has been very little research on the assessment of biological integrity of benthic macroinvertebrates community in Korea. While continuing researches into improve the reliability of BMI, it is necessary to develop multimetric indices for evaluating the integrity, including the composition of species and functional guilds, and the richness and diversity of the community.

• Journal of Ginseng Research
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• 제40권2호
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• pp.127-134
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• 2016

Background: Rhizospheric fungi play an essential role in the plantesoil ecosystem, affecting plant growth and health. In this study, we evaluated the fungal diversity in the rhizosphere soil of 2-yr-old healthy Panax notoginseng cultivated in Wenshan, China. Methods: Culture-independent Illumina MiSeq and culture-dependent techniques, combining molecular and morphological characteristics, were used to analyze the rhizospheric fungal diversity. A diffusion test was used to challenge the phytopathogens of P. notoginseng. Results: A total of 16,130 paired-end reads of the nuclear ribosomal internal transcribed spacer 2 were generated and clustered into 860 operational taxonomic units at 97% sequence similarity. All the operational taxonomic units were assigned to five phyla and 79 genera. Zygomycota (46.2%) and Ascomycota (37.8%) were the dominant taxa; Mortierella and unclassified Mortierellales accounted for a large proportion (44.9%) at genus level. The relative abundance of Fusarium and Phoma sequenceswas high, accounting for 12.9% and 5.5%, respectively. In total,113 fungal isolates were isolated from rhizosphere soil. They were assigned to five classes, eight orders (except for an Incertae sedis), 26 genera, and 43 species based on morphological characteristics and phylogenetic analysis of the internal transcribed spacer. Fusarium was the most isolated genus with six species (24 isolates, 21.2%). The abundance of Phoma was also relatively high (8.0%). Thirteen isolates displayed antimicrobial activity against at least one test fungus. Conclusion: Our results suggest that diverse fungi including potential pathogenic ones exist in the rhizosphere soil of 2-yr-old P. notoginseng and that antagonistic isolates may be useful for biological control of pathogens.

• 한국환경보건학회지
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• 제41권5호
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• pp.305-313
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• 2015

Objectives: The objective of this study is to identify toxicants causing acute toxicity in effluents from the aluminum rolling industry that violate the discharge limits in Korea. Methods: Whole effluent toxicity tests (WET) were conducted on effluent discharged from the aluminum rolling industry following the US EPA WET test methods. We collected effluent samples three times and evaluated acute toxicity by using Daphnia magna. We employed toxicity identification evaluation (TIE) procedures to identify toxicants causing toxicity in the effluent. Results: No specific chemical groups were identified in the seven different manipulations applied to the of wastewater effluent samples showing 1.3 toxic units (TU) according to the TIE phase I procedures. Water quality parameters for water hardness, electric conductivity and heavy metals (Mn) were 4,322 mg/l as $CaCO_3$, 11.39 mS/cm, and $5,551{\mu}g/l$, respectively. Considering water hardness and reference toxicity, high concentrations of Mn can be disqualified from the causative toxicants. Consequently, high ionic concentrations of $Na^+$(1,648 mg/l), $Ca^{2+}$(1,048 mg/l), $Mg^{2+}$(1,428 mg/l) and $SO_4{^{2-}}$(7,472 mg/l) were identified to be causative toxicants. Water hardness and electric conductivity exceed the $EC_{50}$ value obtained by biological toxicity tests using Daphnia magna. Conclusion: According to TIE procedures, high salt concentration is determined to be a major toxicant in the effluent of agro-industrial wastewater treatment plants receiving wastewater from the aluminum rolling industry.

• Ocean Science Journal
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• 제40권3호
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• pp.127-143
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• 2005

The taxonomic sufficiency approach has been proposed as a surrogate for the typical analysis of species-abundance data, especially in conditions involving prominent pollution gradients. Here, we evaluate the use of taxonomic sufficiency with infralittoral macrobenthic data derived from samples taken in a moderate polluted subtropical environment in southeastern Brazil, analysing five taxonomic levels and including two functional levels throughout polychaete feeding guilds and trophic groups. The data were collected seasonally at nine stations and studied for two abundance data series (0.5 and 1.0 mm sieve mesh-size). The results showed a similar ordination pattern between the two sieve mesh-size, but with the 0.5 mm sieve data a different pattern was observed during austral summer. A slight loss of information was detected using genus, family, polychaete species and their feeding guilds as taxonomic/functional units. These results together with those of the cost! benefit ratio, suggested that the family level seemed to be sufficient to detect the impact caused by moderate pollution in this shallow-water, subtropical environment. In additional, through the use of feeding guilds, similar patterns are obtained. Correlation analysis showed that chlorophyll a, total organic matter, zinc, and chromium sediment content were the variables that best explained the biological pattern observed and not always the best correlation coefficient occurring at the species level. The feeding guild approach seems to be useful and generates interpretable results similar to those obtained with the species level of the whole macroinfauna. The results showed an important cost reduction in the sample processing, suggesting that it is possible to adopt a coarser taxonomic level monitoring program even in species-rich communities.

• 대한수의학회지
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• 제58권4호
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• pp.177-182
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• 2018

Canine adenovirus type 2 (CAV-2) infection results in significant respiratory illness in dogs. Isolating and culturing CAV-2 allows for investigations into its pathogenesis and the development of vaccines and diagnostic assays. In this study, we successfully isolated a virus from a naturally infected dog in Gyeonggi-do, Korea. The virus was propagated in Madin-Darby canine kidney (MDCK) and Vero cells and showed a specific cytopathic morphology that appeared similar to a bunch of grapes. The virus was first confirmed as CAV-2 based on these cytopathic effects, an immunofluorescence assay, hemagglutination assay, and electron microscopy. The viral titer of the isolate designated APQA1601 reached $10^{6.5}$ 50% tissue culture infections dose per mL in MDCK cells and exhibited no hemagglutination units with erythrocytes from guinea pig. The virus was also confirmed by polymerase chain reaction and next-generation sequencing. The APQA1601 strain had the highest similarity (~99.9%) with the Toronto A26/61 strain, which was isolated in Canada in 1976 when the nucleotide sequences of the full genome of the APQA1601 strain were compared with those of other CAV strains. Isolating CAV-2 will help elucidate the biological properties of CAV-2 circulating in Korean dogs.

• 대한수의학회지
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• 제61권2호
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• pp.13.1-13.8
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• 2021

Mammalian reovirus (MRV) causes respiratory and intestinal disease in mammals. Although MRV isolates have been reported to circulate in several animals, there are no reports on Korean MRV isolates from wildlife. We investigated the biological and molecular characteristics of Korean MRV isolates based on the nucleotide sequence of the segment 1 gene. In total, 144 swabs from wild animals were prepared for virus isolation. Based on virus isolation with specific cytopathic effects, indirect fluorescence assays, electron microscopy, and reverse transcription-polymerase chain reaction, only one isolate was confirmed to be MRV from a Korean roe deer (Capreolus pygargus). The isolate exhibited a hemagglutination activity level of 16 units with pig erythrocytes and had a maximum viral titer of 10^5.7 50% tissue culture infectious dose (TCID₅₀)/mL in Vero cells at 5 days after inoculation. The nucleotide and amino-acid sequences of the partial segment S1 of the MReo2045 isolate were determined and compared with those of other MRV strains. The MReo2045 isolate had nucleotide sequences similar to MRV-3 and was most similar (96.1%) to the T3/Bat/Germany/342/08 strain, which was isolated in Germany in 2008. The MReo2045 isolate will be useful as an antigen for sero-epidemiological studies and developing diagnostic tools.

• Applied Biological Chemistry
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• 제40권1호
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• pp.12-17
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• 1997

젓갈류로 부터 Lactobacillus cases 2주와 L. pentosus 1주를 분리, 동정한 후 이들 유산균의 요구르트 제조 Starter로서의 이용 가능성을 고찰하고자, 이들 균주를 Starter로 이용하여 요구르트를 제조한 결과 요구르트 고유의 pH값은 $4.03{\sim}4.26$, 산도는 $1.049{\sim}1.217%$, 점도는 $1,772{\sim}2,232\;cps$, 그리고 생균수는 $1.4{\times}10^9{\sim}1.6{\times}10^9\;cfu/ml$였다. 요구르트의 완충능은 (요구르트 100 ml 기준) 1.0N HCl의 경우 12.50 ml 부터 14.06 ml 소모 되었고 1.0N NaOH는 9.46 ml 부터 13.06 ml 소모 되었다. 한편, 요구르트 제조시 균주 첨가 후 24시간 부터 72시간 동안 경시적으로 ${\beta}-galactosidase$ 활성도를 조사한 결과 48시간에 최고의 효소활성을 보였으며 이후에는 감소하였다. 또한 산성조건에서 2시간 동안 경시적으로 ${\beta}-galactosidase$ 활성도와 유산균 생존율을 측정한 결과 pH 3.5에서 2시간 후에는 $20{\sim}60%$ 정도 효소활성이 감소하였으며 pH 2.5와 pH 1.5에서 효소활성은 거의 없었다. 한편, 유산균의 생존율은 pH 3.5에서 2시간 후 거의 변화가 없었으나 pH 2.5와 pH 1.5에서는 각각 $1.9{\times}10^6{\sim}1.8{\times}10^8,\;1.0{\times}10^3{\sim}2.4{\times}10^5\;cfu/ml$ 수준이었다.

• Asian-Australasian Journal of Animal Sciences
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• 제32권4호
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• pp.564-573
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• 2019

Objective: Evaluate the effects of i) dehulling of lupine seed on chemical composition and apparent metabolizable energy (AME) and ii) soybean meal substitution by dehulled lupine seed in broiler diets with enzymes on productive performance, size of digestive organs and welfare-related variables. Methods: Experiment 1, chemical composition and AME were determined in whole and dehulled lupine seed. Experiment 2, two hundred eighty-eight one-day-old male Ross 308 broilers were used. The experimental diets were maize-soybean meal (MS), MS with enzymes (MSE) and maize-dehulled lupine seed with enzymes (MLE). Diets were assigned to the experimental units under a completely randomized design (eight replicates per diet). The body weight (BW) gain, feed intake, feed conversion, digestive organ weights, gait score, latency to lie down and valgus/varus angulation were evaluated. Results: The dehulling process increased protein (25.0% to 31.1%), AME (5.9 to 8.8 MJ/kg) and amino acid contents. The BW gain of broilers fed the MLE diet was similar (p>0.05) to that of those fed the MS diet, but lower than that of those fed the MSE diet. Feed intake of broilers fed the MLE diet was higher (p<0.05) than that of those fed the MS diet and similar (p>0.05) to those fed the MSE diet. Feed conversion of broilers fed the MLE diet was 8.0% and 8.7% higher (p<0.05) than that of those fed the MS and MSE diets, respectively. Broilers fed the MLE diet had the highest (p<0.05) relative proventriculus and gizzard weights, but had poor welfare-related variables. Conclusion: It is possible to substitute soybean meal by dehulled lupine seed with enzymes in broiler diets, obtaining similar BW gains in broilers fed the MLE and MS diets; however, a higher feed intake is required. Additionally, the MLE diet reduced welfare-related variables.