• Title/Summary/Keyword: biological network

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Forecasting common mackerel auction price by artificial neural network in Busan Cooperative Fish Market before introducing TAC system in Korea (인공신경망을 활용한 고등어의 위판가격 변동 예측 -어획량 제한이 없었던 TAC제도 시행 이전의 경우-)

  • Hwang, Kang-Seok;Choi, Jung-Hwa;Oh, Taeg-Yun
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.48 no.1
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    • pp.72-81
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    • 2012
  • Using artificial neural network (ANN) technique, auction prices for common mackerel were forecasted with the daily total sale and auction price data at the Busan Cooperative Fish Market before introducing Total Allowable Catch (TAC) system, when catch data had no limit in Korea. Virtual input data produced from actual data were used to improve the accuracy of prediction and the suitable neural network was induced for the prediction. We tested 35 networks to be retained 10, and found good performance network with regression ratio of 0.904 and determination coefficient of 0.695. There were significant variations between training and verification errors in this network. Ideally, it should require more training cases to avoid over-learning, which leads to improve performance and makes the results more reliable. And the precision of prediction was improved when environmental factors including physical and biological variables were added. This network for prediction of price and catch was considered to be applicable for other fishes.

Informatics Network Representation Using Probabilistic Graphical Models of Network Genetics (유전자 네트워크에서 확률적 그래프 모델을 이용한 정보 네트워크 추론)

  • Ra Sang-Dong;Park Dong-Suk;Youn Young-Ji
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.10 no.8
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    • pp.1386-1392
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    • 2006
  • This study is a numerical representative modelling analysis for applying the process that unravels networks between cells in genetics to WWW of informatics. Using the probabilistic graphical model, the insight from the data describing biological networks is used for making a probabilistic function. Rather than a complex network of cells, we reconstruct a simple lower-stage model and show a genetic representation level from the genetic based network logic. We made probabilistic graphical models from genetic data and extends them to genetic representation data in the method of network modelling in informatics.

A Study on Integrated Information and Communication Network for Oceanographic Research Vessel (해양 조사선의 종합정보통신망 구축방안 연구)

  • 박종원;강준선;임용곤;홍석원
    • Proceedings of the Korean Institute of Information and Commucation Sciences Conference
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    • 2001.05a
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    • pp.167-172
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    • 2001
  • This paper deals with the network interface of research and observation instruments in the oceanographic research vessel, an establishment of related database for measured information. The system is implemented to integrated communication network system which allows to effective survey and real time-based observation through the establishment of GUI(Graphic User Interface). The system also consists of the LAN systems and serial interface with chemical, physical, biological, and environmental relations. And, other network service, vessel data service for data communication between vessel and earth station using the INMARSAT-B, and network service(WWW, BBS, E-Mail etc.) are needed for integrated communication network system.

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Development of an Optimal EEG and Artifact Classifier Using Neural Network Operating Characteristics (신경망 운영특성곡선을 이용한 최적의 뇌파 및 Artifact 분류기 구성)

  • Lee, T.Y.;Ahn, C.B.;Lee, S.H.
    • Proceedings of the KOSOMBE Conference
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    • v.1995 no.05
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    • pp.160-163
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    • 1995
  • An optimal EEG and artifact classifier is proposed using neural network operating characteristics. The neural network operating characteristics are two dimensional parametric representations of the right and false identification probabilities of the network classifier. Since the EEG and EP signals acquired from multi -channel electrodes placed on the head surface are often interfered by other relatively large physiological signals such as electromyogram (EMG) or electroculogram (EOG), the removal of the artifact-affected EEGs is one of the key elements in neuro-functional mapping. Conventionally this task has been carried out by human experts spending lots of examination time. Using the neural-network based classification, human expert's efforts and time can be substantially reduced. From experiments, the neural-network based classification performs as good as human experts: variation of decisions between the neural network and human expert appears even smaller than that between human experts.

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Prediction of functional molecular machanism of Astragalus membranaceus on obesity via network pharmacology analysis (네트워크 약리학을 통한 황기의 항비만 효능 및 작용기전 예측 연구)

  • Mi Hye, Kim
    • The Korea Journal of Herbology
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    • v.38 no.1
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    • pp.45-53
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    • 2023
  • Objectives : Network pharmacology-based research is one of useful tool to predict the possible efficacy and molecular mechanisms of natural materials with multi compounds-multi targeting effects. In this study, we investigated the functional underlying mechanisms of Astragalus membranaceus Bunge (AM) on its anti-obesity effects using a network pharmacology analysis. Methods : The constituents of AM were collected from public databases and its target genes were gathered from PubChem database. The target genes of AM were compared with the gene set of obesity to find the correlation. Then, the network was constructed by Cytoscape 3.9.1. and functional enrichment analysis was conducted to predict the most relevant pathway of AM. Results : The result showed that AM network contained the 707 nodes and 6867 edges, and 525 intersecting genes were exhibited between AM and obesity gene set, indicating that high correlation with the effects of AM on obesity. Based on GO biological process and KEGG Pathway, 'Response to lipid', 'Cellular response to lipid', 'Lipid metabolic process', 'Regulation of chemokine production', 'Regulation of lipase activity', 'Chemokine signaling pathway', 'Regulation of lipolysis in adipocytes' and 'PPAR signaling pathway' were predicted as functional pathways of AM on obesity. Conclusions : AM showed high relevance with the lipid metabolism related with the chemokine production and lipolysis pathways. This study could be a basis that AM has promising effects on obesity via network pharmacology analysis.

A Biological Fuzzy Multilayer Perceptron Algorithm

  • Kim, Kwang-Baek;Seo, Chang-Jin;Yang, Hwang-Kyu
    • Journal of information and communication convergence engineering
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    • v.1 no.3
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    • pp.104-108
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    • 2003
  • A biologically inspired fuzzy multilayer perceptron is proposed in this paper. The proposed algorithm is established under consideration of biological neuronal structure as well as fuzzy logic operation. We applied this suggested learning algorithm to benchmark problem in neural network such as exclusive OR and 3-bit parity, and to digit image recognition problems. For the comparison between the existing and proposed neural networks, the convergence speed is measured. The result of our simulation indicates that the convergence speed of the proposed learning algorithm is much faster than that of conventional backpropagation algorithm. Furthermore, in the image recognition task, the recognition rate of our learning algorithm is higher than of conventional backpropagation algorithm.

Intelligent Motion Planner for Redundant Manipulators Controlled by Neuro-Biological Signals

  • Kim, Chang-Hyun;Kim, Min-Soeng;Lee, Ju-Jang
    • 제어로봇시스템학회:학술대회논문집
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    • 2003.10a
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    • pp.845-848
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    • 2003
  • There are many researches on using human neuro-biological signals for various problems such as controlling a mechanical object and/or interfacing human with the computer. It is one of very interesting topics that human can use various instruments without learning specific knowledge if the instruments can be controlled as human intends. In this paper, we proposed an intelligent motion planner for a redundant manipulator, which is controlled by humans neuro-biological signals, especially, EOG (Electrooculogram). We found the optimal motion planner for the redundant manipulator that can move to the desired point. We used neural networks to find the inverse kinematics solution of the manipulator. We also showed the performance of the proposed motion planner with several simulations.

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Mesenchymal stem cells and osteogenesis

  • Jung, Cho-Rok;Kiran, Kondabagil R.;Kwon, Byoung S.
    • IMMUNE NETWORK
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    • v.1 no.3
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    • pp.179-186
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    • 2001
  • Bone marrow stroma is a complex tissue encompassing a number of cell types and supports hematopiesis, differentiation of erythreid, nyel and lymphoid lineages, and also maintains undifferentiated hematopoietic stem cells. Marrow-derived stem cells were composed of two populations, namely, hematopoietic stem cells that can differentiate into blood elements and mesenchymal stem cells that can give rise to connective tissues such as bone, cartilage, muscle, tendon, adipose and stroma. Differentiation requires environmental factors and unique intracellular signaling. For example, $TGF-{\beta}$ or BMP2 induces osteoblastic differentiation of mesenchymal stem are very exciting. However, the intrinsic controls involved in differentiation of stem cells are yet to be understood properly in order to exploit the same. This review presents an overview of the recent developments made in mesenchymal stem cell research with respect to osteogenesis.

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Biological Signal Measurement, Archiving, and Communication System (SiMACS) (생체신호 측정 및 종합관리 시스템 (SiMACS))

  • Woo, Eung-Je;Park, Seung-Hun
    • Proceedings of the KOSOMBE Conference
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    • v.1994 no.05
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    • pp.49-52
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    • 1994
  • We have developed a biological signal measurement, archiving, and communication system (SiMACS). The front end of the system is the intelligent data processing unit (IDPU) which includes ECG, EEG, EMG, blood pressure, respiration, temperature measurement modules, module control and data acquisition unit, real-time display and signal processing unit. IDPUS are connected to central data base unit through LAN(Ethernet). Workstations which receive signals from central DB and provide various signal analysis tools are also connected to the network. The developed PC-based SiMACS is described.

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A Study on the Automatic Sleep Scoring using Artificial Intelligence (인공지능을 이용한 수면 상태의 자동 분석에 관한 연구)

  • Park, H.J.;Han, J.M.;Jeong, D.U.;Park, K.S.
    • Proceedings of the KOSOMBE Conference
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    • v.1997 no.05
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    • pp.430-433
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    • 1997
  • We present the preliminary algorithms for automatic sleep scoring. According to the Rechtschaffen & Kales[3]'s critera, we developed six events detectors and eight parameters which contain the background information of signals, such as EEG, EMG, EOG. With the calculated parameters, we scored each epoch by IF-THEN rules, ANFIS for REM preiods, and finally Neural Network for unobvious epochs. The typical point of this algorithm is that the epoch which had good data sets were calculated in the first stage, and unobvious epochs were postponed until the final stage. After staging the good epochs, we classified unobvious epochs by the dominant stage of previous and posterior epochs.

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