• Title/Summary/Keyword: biological model

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Fish Species Compositions and the Application of Ecological Assessment Models to Bekjae Weir, Keum-River Watershed (금강 수계 백제보에서 어류의 종 특성 평가 및 생태평가모델 적용)

  • Moon, Seong-Dae;Han, Jeong-Ho;An, Kwang-Guk
    • Journal of Environmental Science International
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    • v.24 no.6
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    • pp.731-741
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    • 2015
  • The objectives of study were to evaluate fish species compositions of trophic guilds and tolerance guilds and apply ecological fish assessment (EFA) models to Bekjae Weir, Keum-River Watershed. The EFA models were Stream Index of Biological Integrity (SIBI) used frequently for running water and Lentic Ecosystem Health Assessment (LEHA) used for assessments of stagnant water. The region of Bekjae Weir as a "four major river project" was originally a lotic ecosystem before the weir construction (2010, $B_{WC}$) but became more like lentic-lotic hybrid system after the construction (2011, $A_{WC}$). In the analysis of species composition and ecological bioindicator (fish), fish species with a preference of running water showed significant decreases (p < 0.05), whereas the species with a preference of stagnant water showed significant increases (p < 0.05). After the weir construction, relative abundances of tolerant species increased, and the proportion of insectivores decreased. This phenomenon indicated the changes of biotic compositions in the system by the weir construction. Applications of SIBI and LEHA models to the system showed that the two model values decreased at the same time after the weir construction ($A_{WC}$), and the region became more like lentic-lotic hybrid system, indicating the degradation of ecosystem health. The model values of SIBI were 19 and 16, respectively, in the BWC and AWC, and the health conditions were both "C-rank". In the mean time, the LEHA model analysis showed that the values was 28 in the BWC and 24 in the AWC, thus the health was turned to be "B-Rank" in the BWC and "C-Rank" in the AWC. indicating a degradation of ecological heath after the weir construction.

On-line Identification of The Toxicological Substance in The Water System using Neural Network Technique (조류를 이용한 수계모니터링 시스템에서 뉴럴 네트워크에 의한 실시간 독성물질 판단)

  • Jung, Jonghyuk;Jung, Hakyu;Kwon, Wontae
    • Journal of Korean Society on Water Environment
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    • v.24 no.1
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    • pp.1-6
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    • 2008
  • Biological and chemical sensors are the two most frequently used sensors to monitor the water resource. Chemical sensor is very accurate to pick up the types and to measure the concentration of the chemical substance. Drawback is that it works for just one type of chemical substance. Therefore a lot of expensive monitoring system needs to be installed to determine the safeness of the water, which costs too much expense. Biological sensor, on the contrary, can judge the degree of pollution of the water with just one monitoring system. However, it is not easy to figure out the type of contaminant with a biological sensor. In this study, an endeavor is made to identify the toxicant in the water using the shape of the chlorophyll fluorescence induction curve (FIC) from a biological monitoring system. Wem-tox values are calculated from the amount of flourescence of contaminated and reference water. Curve fitting is executed to find the representative curve of the raw data of Wem-tox values. Then the curves are digitalized at the same interval to train the neural network model. Taguchi method is used to optimize the neural network model parameters. The optimized model shows a good capacity to figure out the toxicant from FIC.

Biological Pump in the East Sea Estimated by a Box Model (상자 모형으로 추정한 동해의 생물 펌프)

  • Kim, Jae-Yeon;Kang, Dong-Jin;Kim, Eung;Cho, Jin-Hyung;Lee, Chang-Rae;Kim, Kyung-Ryul;Lee, Tong-Sup
    • The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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    • v.8 no.3
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    • pp.295-306
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    • 2003
  • Recently efforts are underway to analyze the impacts of anthropogenic $CO_2$ on the global environments and the amount of oceanic uptake increase. The East Sea is now viewed as a miniature ocean because its circulation pattern is similar to the ocean conveyer belt. The biological pump of the East Sea is a vital component to understand the carbon cycle quantitatively. In this paper, the biological pump is estimated utilizing the stoichiometric ratio between carbon and phosphorus. A simple phosphate budget model is constructed based on the seawater and dissolved oxygen box model that can simulate the recent structural change in deep water circulation of the East Sea. A model run from you 1952 to 2040 shows the steadily intensifying biological pump. Currently it exports about 0.016 Pg C yr$^{-1}$ , which corresponds to 35% of the carbon introduced into the seawater by the air-sea exchange. An increased oxygen supply to the central water mass as a result of from the transition in the ventilation system might enhance the remineralization of sinking biogenic particles. This should strengthen the upward nutrient flux into the surface layer. Consequently, the biological sequestration of anthropogenic carbon is expected to increase with time. The estimated biological uptake of the anthropogenic carbon in the East Sea since the Industrial Revolution is estimated as 0.025 Pg C.

Silencing MR-1 attenuates atherosclerosis in ApoE-/- mice induced by angiotensin II through FAK-Akt -mTOR-NF-kappaB signaling pathway

  • Chen, Yixi;Cao, Jianping;Zhao, Qihui;Luo, Haiyong;Wang, Yiguang;Dai, Wenjian
    • The Korean Journal of Physiology and Pharmacology
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    • v.22 no.2
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    • pp.127-134
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    • 2018
  • Myofibrillogenesis regulator-1 (MR-1) is a novel protein involved in cellular proliferation, migration, inflammatory reaction and signal transduction. However, little information is available on the relationship between MR-1 expression and the progression of atherosclerosis. Here we report atheroprotective effects of silencing MR-1 in a model of Ang II-accelerated atherosclerosis, characterized by suppression focal adhesion kinase (FAK) and nuclear factor kappaB ($NF-{\kappa}B$) signaling pathway, and atherosclerotic lesion macrophage content. In this model, administration of the siRNA-MR-1 substantially attenuated Ang II-accelerated atherosclerosis with stabilization of atherosclerotic plaques and inhibited FAK, Akt, mammalian target of rapamycin (mTOR) and NF-kB activation, which was associated with suppression of inflammatory factor and atherogenic gene expression in the artery. In vitro studies demonstrated similar changes in Ang II-treated vascular smooth muscle cells (VSMCs) and macrophages: siRNA-MR-1 inhibited the expression levels of proinflammatory factor. These studies uncover crucial proinflammatory mechanisms of Ang II and highlight actions of silencing MR-1 to inhibit Ang II signaling, which is atheroprotective.

Response Surface Methodological Approach for Optimization of Removal of Free Fatty Acid in Crude Oil

  • Jeong, Gwi-Taek;Lee, Kyoung-Min;Yang, Hee-Seung;Park, Seok-Hwan;Kim, Jae-Hoon;Kim, Do-Man;Park, Don-Hee
    • 한국생물공학회:학술대회논문집
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    • 2005.10a
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    • pp.904-909
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    • 2005
  • To optimize the removal of free fatty acid in crude vegetable oil, response surface methodology was applied to determine the effects of five level-four factors and their reciprocal interactions on removal of free fatty acid. A total of 30 individual experiments were performed, which were designed to study reaction temperature, reaction time, catalyst amount and methanol amount. A statistical model predicted that the highest removal yield of free fatty acid was 99.8%, at the following optimized reaction conditions: a reaction temperature of 64.99$^{\circ}C$, a reaction time of 36.20 mins., an catalyst amount of 13.01% (w/v), and a methanol amount of 15% (v/v). Using these optimal factor values under experimental conditions in three independent replicates, the average removal yield was well within the value predicted by the model.

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Ecosystem Health Diagnosis Using Integrative Multiple Eco-metric Model Approaches

  • Kim, Hyun-Mac;Choi, Ji-Woong;An, Kwang-Guk
    • Journal of Ecology and Environment
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    • v.36 no.1
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    • pp.73-83
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    • 2013
  • The object of this study was to evaluate lotic ecosystem health using multiple eco-metric approaches such as water chemistry diagnosis, physical habitat health evaluations, and biological integrity modeling at 100 streams of four major watersheds. For the study, eight chemical water quality parameters such as nutrients (N, P) and organic material were measured and 11-metric models of Qualitative Habitat Evaluation Index (QHEI) and multiple eco-metric health assessment model (MEHA) were applied to the four major watershed. Nutrient analysis of nitrogen (N) and phosphorus (P) in all watersheds indicated a eutrophic state depending on the locations of sampling streams. Physical habitat health, based on the QHEI model, averaged 114 (range: 56 - 194), judging as a "good condition" by the criteria of Plafkin et al. (1989). In addition, primary (H1 - H4), secondary (H5 - H7), and tertiary habitat metric variables (H8 - H11) were analyzed in relation to the physical habitat degradations. The plots of tolerant species ($P_{TS}$) and sensitive species ($P_{SS}$) to water quality showed that the proportions of $P_{TS}$ had positive linear functions with nutrients, and that the $P_{SS}$ had inverse linear relations with the chemical variables. The model of eco-metric health assessment showed that mean MEHA was 20.4, indicating a fair condition. Overall, our data suggest that water chemistry, based on nutrients and organic matter, directly modified the trophic structures in relation to food chain in the aquatic ecosystems, and then these directly influenced the compositions of tolerance/sensitive species, resulting in degradations of overall ecological health.

Investigation of Change in Air-Sea CO2 Exchange over the East China Sea using Biogeochemical Ocean Modeling (생지화학모델링을 이용한 동중국해 해양-대기 CO2교환량의 변화 연구)

  • Park, Young-Gyu;Choi, Sang-Hwa;Yeh, Sang-Wook;Lee, Jung-Suk;Hwang, Jin-Hwan;Kang, Seong-Gil
    • Ocean and Polar Research
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    • v.30 no.3
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    • pp.325-334
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    • 2008
  • A biogeochemical model was used to estimate air-sea $CO_2$ exchange over the East China Sea. Since fresh water discharge from the Changjiang River and relevant chemistry were not considered in the employed model, we were not able to produce accurate results around the Changjiang River mouth. This factor aside, the model showed that the East China Sea, away from the Changjiang River mouth, takes approximately $1.5{\sim}2\;mole\;m^{-2}yr^{-1}$ of $CO_2$ from the atmosphere. The model also showed that biological factors modify the air-sea $CO_2$ flux by only a few percent when we assumed that biological activity increased two-fold. Therefore, we can argue that the biological effect is not strong enough over this area within the framework of the current phosphate-based biological model. Compared to the preindustrial era, in 1995 the East China Sea absorbed $0.4{\sim}0.8\;mole\;m^{-2}yr^{-1}$ more $CO_2$. If warming of the sea surface is considered, in addition to the increase in atmospheric $CO_2$ concentration, by 2045 the East China Sea would absorb $0.2{\sim}0.4\;mole\;m^{-2}yr^{-1}$ less $CO_2$ compared to the non-warming case.

Model development to design modified atmosphere packaging of Mandarin oranges

  • Kim, Jong-Kyoung;Lee, Sang-Duk;Ha, Young-Sun;Lee, Jun-Ho
    • Proceedings of the Korean Society of Postharvest Science and Technology of Agricultural Products Conference
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    • 2003.10a
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    • pp.192.1-192
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    • 2003
  • The aim of this study was to develop a model that could be used in the design of modified atmosphere packaging (MAP) for Mandarin oranges. Respiratory data at 5, 10, 20$^{\circ}C$ for mandarin oranges were gathered and altered for create useful respiration model. The maximum rate of oxygen uptake increased with increasing temperature. The packaging materials were conventional low density polyethylene and polypropylene with anti-fog, and anti-fungi treatments, and thickness was 30 $\mu\textrm{m}$ and 50 $\mu\textrm{m}$. Permeability tests were performed to find their oxygen, carbon dioxide, water vapor transmission rate as increases in temperature. Test results were then converted to logarithm format for MAP modeling. Optimum gas composition in the package system for fruits were set according to literature and upper or lower limits of oxygen and dioxide established. To predict gas composition at certain storage time, weight of fruits, film thickness, film type, and other variables, respiration rate was studied at various storage conditions. The validity of the model was tested experimentally by observing actual atmospheric changes inside packages. It is concluded that the strategy developed is of use in designing dynamic gas exchange MAP systems, and also has potential uses in similar agricultural products.

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Verification of biological nitrogen removal model in anoxic-oxic process (무산소-산소 공정에서 생물학적 질소 제거 모델의 검증)

  • Lee Byung-Dae;Cheong Kung-Hoon
    • Journal of Environmental Science International
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    • v.14 no.12
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    • pp.1155-1161
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    • 2005
  • Anoxic-oxic process were analyzed numerically for the each unit and final TN effluent by Water Quality Management(WQM) model and the results were compared data from these sewage or wastewater treatment plants. No bugs and logic error were occurred during simulation work. All of the simulation results tried to two times were obtained and both results were almost same thus this model has good reappearance. A few of simulation results were deviated with measured data because lack of influent water qualities are reported however simulation results have wholly good relationship with measured data. Also each unit of simulation result was kept good relationship with that of measured data therefore this WQM model has good reliance. Finally, WQM model predicts final TN effluent within ${\pm}4.1\;mg/{\ell}$

Correlation between physicochemical properties and biological half-life of triazole fungicides in perilla leaf (들깻잎에서 Triazole계 살균제의 생물학적 반감기와 물리화학적 특성과의 상관관계)

  • Lee, Sang-Hyeob;Kwak, Se-Yeon;Hwang, Jeong-In;Kim, Hyo-Jung;Kim, Tae-Hwa;Kim, Jang-Eok
    • Journal of Applied Biological Chemistry
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    • v.62 no.4
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    • pp.407-415
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    • 2019
  • The biological half-life of pesticides applied on crops is the key indicator for ensuring the safety of agricultural products. The biological half-life is affected by the several factors like growing conditions of the crop, climate, application method, and physicochemical properties of pesticides. In this study, the biological half-life was calculated and the degradation rates of six triazole fungicides sprayed on perilla leaves were evaluated. Moreover, the statistical analysis confirmed the correlation between the biological half-life and physicochemical properties of six triazole pesticides. The recoveries of the six pesticides were between 84.8-104.9%, which satisfied the residual pesticide analysis criteria. The biological half-life of six pesticides sprayed on perilla leaves, calculated using the first-order kinetics model, ranged between 6.4-15.1 days. When the biological half-life and the physicochemical properties were correlated using the principal component analysis: pKa and Log P, the biological half-life was found to be affected by PC1. The correlation coefficient between biological half-life and physicochemical properties (pKa), calculated by Spearman rank-order correlation, was R2 = -0.928 (p <0.01). Biological half-life has been shown to correlate with pKa. In conclusion, it can be used as a database for the relationship between biological half-life and physicochemical properties and will contribute to ensure safe supply of agricultural products.