• Title/Summary/Keyword: biological environmental characteristics

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A report of 10 unrecorded bacterial species of Korea, isolated from agricultural soil in 2022

  • Oung Bin Lim;Ji Soo Lee;Hyosun Lee;Ki Eun Lee;In Tae Cha;Won Jae Chi;Dong-Uk Kim
    • Korean Journal of Environmental Biology
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    • v.41 no.3
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    • pp.215-222
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    • 2023
  • In 2022, research for native prokaryotic species in Korea reported 10 unrecorded bacterial strains affiliated to phyla Actinomycetota, Bacillota, and Pseudomonadota. The strains formed monophyletic clades with the most closely related species (with ≥98.7% sequence similarity) in the 16S rRNA gene sequencing. Among them, four species of the phylum Actinomycetota, two species of the phylum Bacillota, and four species of the phylum Pseudomonadota have not been reported in Korea, suggesting unrecorded species in Korea. Information on strains such as Gram staining reaction, colony and cell morphology, biochemical characteristics, and isolation sources were provided in the species description.

A report on 20 unrecorded bacterial species of Korea isolated from soil in 2021

  • Ji Yeon, Han;Oung Bin, Lim;So-Yi, Chea;Hyosun, Lee;Ki-Eun, Lee;In-Tae, Cha;Won-Jae, Chi;Dong-Uk, Kim
    • Journal of Species Research
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    • v.11 no.4
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    • pp.310-320
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    • 2022
  • As a subset study to discover indigenous prokaryotic species in Korea, we isolated 20 bacterial strains and assigned them to the phyla Actinobacteria, Bacteroidota, Firmicutes, and Proteobacteria. From the high 16S rRNA gene sequence similarity (≥98.7%) and formation of a robust phylogenetic clades, we determined that each strain belonged to independent, predefined bacterial species. There are no official reports of these 20 species in Korea; therefore, 7 strains of the Actinobacteria, 2 strain of the Bacteroidota, 3 strains of the Firmicutes, and 8 strains of the Firmicutes are described in Korea for the first time. Gram reaction, colony and cell morphology, basic biochemical characteristics, and isolation sources are also described in the species description section.

Environmental Characteristics of Habitats of Iris odaesanensis Y.N.Lee (노랑무늬붓꽃(Iris odaesanensis Y.N.Lee) 자생지의 환경특성)

  • Cheon, Kyeong-Sik;Han, Jun-Soo;Seo, Won-Bok;Kim, Kyung-Ah;Yoo, Ki-Oug
    • Journal of Environmental Science International
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    • v.19 no.11
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    • pp.1337-1353
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    • 2010
  • This study intended to investigate environmental factors including soil and vegetation in order to understand the environmental and ecological characteristics of 12 different habitats of Iris odaesanensis. These habitats, according to investigations, are mostly located at elevation of 280 m to 1,555 m with angles of inclination ranging from 2 degree to 30 degrees. A total of 273 vascular plants are identified in 23 quadrates of 12 habitats. Dominant species of woody plants in 12 habitats are represented as Quercus mongolica in the tree layer (T1) and the subtree (T2) layer, and Lespedeza maximowiczii, Lindera obtusiloba, Rhododendron schlippenbachii in the shrub (S) layer. The importance value of Iris odaesanensis is 9.65%, as regards the herbaceous layer, and 6 highly ranked species such as Carex siderosticta (3.92%), Meehania urticifolia (2.67%), Spodiopogon cotulifer (2.58%), Aconitum pseudolaeve (2.51%), Carex bostrychostigma (2.28%) and Disporum smilacinum (2.09%) are considered to be an affinity with Iris odaesanensis in their habitats. The degree of their average species diversity is 1.32, and that of dominance and evenness are 0.08 and 0.89, respectively. The type of soil is sandy loam and loam, and the average field capacity of soil is 28.31%. Their average organic matter is 16.71%, soil pH 5.29, and available phosphorus is 9.29%. Correlation coefficients analysis based on environmental factors, vegetation and soil analysis shows that the coverage of Iris odaesanensis is correlated with pH and dominance, and species richness is positive related with species diversity.

Immigration Plant Characteristics of Seoullo 7017, as Artificial Foundation Greening Area, after completion 1 year (인공지반녹화지역인 서울로 7017 개원후 1년간의 이입식물 특성)

  • Cha, Doo-Won;Choi, Dong-Suk;Song, Jong-Won;Choe, Ji-Won;Oh, Choong-Hyeon
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.23 no.1
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    • pp.15-36
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    • 2020
  • The purpose of this study is to provide basic data for the establishment of the management plan of Seoullo 7017 after analyzing the characteristics of immigration plants in addition to those introduced plants. The taxa number of plants appeared as 276 taxa including 82 families, 161 genera, 246 species, 1 subspecies, 22 varieties and 7 forms. Among them, immigration plants appeared 79 classification groups, including 32 families, 65 genera, 77 species and 2 varieties. Invasive alien plants appeared as 22 classification groups in 79 classification groups of immigration plants. The ratio of America origin plants, second period(1932~1960) in introduction time and the wide diffusion species is high. In June, the growth and occurrence time of the immigration plants was the highest by monthly the characteristics of the growth of the immigration plants, the immigration plants appeared mostly. In case of dormancy form among life-form, the therophytes(th), in the propagation form-radicoid form, the R5(monophyte), in the propagation form-disseminule form, the gravity D4(having no special modification for dissemination), and in the growth form, the erect form(e) was high. The various immigration plants appeared in green areas covered by Zoysia japonica and low Hedera helix densities. This study is the first flora study since Seoullo 7017 was opened in 2017. And so continuous flora monitoring is required for Seoullo 7017.

Isolation and Characterization of Previously Undescribed Seventeen Fungal Species Belonging to the order Hypocreales in Korea

  • Jaeduk Goh;Yoosun Oh;Young-Hwan Park;Hye Yeon Mun;Sangkyu Park;Wonsu Cheon
    • The Korean Journal of Mycology
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    • v.50 no.1
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    • pp.1-29
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    • 2022
  • Hypocreales is one of the largest orders within the class Sordariomycetes in Ascomycota. Several species of this order are cosmopolitan and have a broad range of habitats. Here, we isolated several fungal strains from environmental samples, including freshwater sediment and plant litter. The strains were identified via molecular and phylogenetic analyses of rDNA and other DNA markers, such as TUB, RPB2, and EF1. The morphological characteristics of the fungi were investigated using microscopy, and culture characteristics were assessed from their growth on several media. We identified 17 species previously unrecorded in Korea: Dactylonectria hordeicola, Flavocillium bifurcatum, Fusarium luffae, Ilyonectria ilicicola, Ilyonectria qitaiheensis, Ilyonectria robusta, Lecanicillium aphanocladii, Nectria ulmicola, Neonectria lugdunensis, Ovicillium oosporum, Pseudonectria foliicola, Sarocladium spinificis, Scolecofusarium ciliatum, Trichoderma appalachiense, Trichoderma subviride, Trichoderma taiwanense, and Trichoderma tsugarense.

Biological and Ecological Considerations of the Freshwater Amphipod, Diporeia spp.

  • Song, Ki-Hoon
    • Korean Journal of Environmental Biology
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    • v.21 no.4
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    • pp.328-336
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    • 2003
  • Biological and ecological characteristics of Diporeia spp. are described including size, growth, life cycle, energy storage, temperature effect, bioturbation, feeding depth and sediment ingestion of Diporeia. Bioaccumulation and toxicity of organic contaminants and trace metals were reviewed in addition to an examination of the relationships among various condition indexes (i.e. wet weight, dry weight and body length) of Diporeia.

New Report of Two Species of Genus Pentias (Crustacea: Malacostraca: Isopoda) from South Korea

  • Song, Ji-Hun;Min, Gi-Sik
    • Korean Journal of Environmental Biology
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    • v.33 no.2
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    • pp.177-181
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    • 2015
  • Two marine isopods, Pentias hayi Richardson, 1904 and P. thompsoni Collinge, 1916 were verified as unrecorded species in South Korea. The genus Pentias is reported for the first time in South Korea. These two isopods were collected from Heuksan-do Island and Ulleung-do Island from South Korea, respectively. We provide descriptions of the diagnostic characteristics, illustrations of two species and their partial sequences of the mitochondrial cytochrome c oxidase subunit 1 (CO1) for molecular characteristics.

New Record of Three Isopod Species (Crustacea: Malacostraca: Isopoda) from South Korea

  • Song, Ji-Hun;Min, Gi-Sik
    • Korean Journal of Environmental Biology
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    • v.33 no.2
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    • pp.182-188
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    • 2015
  • Three marine isopods, Symmius yamaguchiensis Shimomura, 2008, Colanthura pigmentata Kensley, 1980 and Synidotea nipponensis Nunomura, 1985 are reported for the first time in South Korea. The family Chaetiliidae, and genera Symmius and Colanthura are new to South Korea. We provide descriptions of the diagnostic characteristics, illustrations of three species and their partial sequences of the mitochondrial cytochrome c oxidase subunit 1 (CO1) for molecular characteristics.

Isolation and Characterization of Eleven Unrecorded Pezizomycotina Species from Freshwater Ecosystems in Korea

  • Goh, Jaeduk;Jeon, Yu-Jeong;Mun, Hye Yeon;Chung, Namil;Park, Young-Hwan;Park, Sangkyu;Hwang, Hyejin;Cheon, Wonsu
    • The Korean Journal of Mycology
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    • v.48 no.4
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    • pp.423-443
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    • 2020
  • Freshwater fungi are a poly-phylogenetic group of taxonomically diverse organisms. In this study, we isolated diverse fungal strains from various environmental samples obtained from freshwaters in Korea. These strains were identified by performing molecular phylogenetic analyses of rDNA and/or other sequences (beta-tubulin, RNA polymerase II, and translation elongation factor 1). In addition, we examined their morphological characteristics microscopically and cultural characteristics using different media. We identified eleven unrecorded Pezizomycotina species: Cladosporium angulosum, Pseudorobillarda phragmitis, Paraconiothyrium estuarinum, Pseudopithomyces palmicola, Pyrenochaetopsis paucisetosa, Thelebolus globosus, Plagiostoma mejianum, Trichoderma cremeum, Fusarium tanahbumbuense, Coniochaeta endophytica, and Chaetomium tenue. Environmental samples obtained from different freshwater ecosystems in Korea could thus be a good source for isolating and investigating novel fungal species.

Residual Characteristics and Behavior of Azoxystrobin in Ginseng by Cultivation Conditions (인삼 중 azoxystrobin의 재배방법별 잔류특성 및 행적)

  • Lee, Jae Yun;Noh, Hyun Ho;Park, Hyo Kyoung;Kim, Jin Chan;Jeong, Hye Rim;Jin, Me Jee;Kyung, Kee Sung
    • The Korean Journal of Pesticide Science
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    • v.19 no.1
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    • pp.14-21
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    • 2015
  • To determine residual characteristics of azoxystrobin in ginseng under different cultivation conditions such as use of straw mat on cultivation soil and filling gap between ginseng stem and soil surface and also to elucidate its approximate behavior after spraying, 20% azoxystrobin suspension concentrate solution was sprayed 4 times onto 5-year-old ginseng with 10 days interval at a application rate of about 200 L/10 a and then residues in samples were analyzed. The residue level was lower in case of use of straw mat and filling the gap with soil than in case of no use of straw mat and no filling the gap, representing that use of straw mat and filling the gap with soil were contributed to decrease of pesticide residues in ginseng. A large portion of the test pesticide distributed onto ginseng leaf with a higher specific surface area. The amounts of azoxystrobin residues decreased in ginseng leaf, while increased on soil surface, as close to harvest. About 0.1% of azoxystrobin sprayed was distributed in ginseng root and 12.7-20.4% (mean 16.6%) of azoxystrobin could be decreased for dietary intake by removing of rhizome from ginseng root before intake.