• Journal of Ecology and Environment
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• 제47권4호
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• pp.177-186
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• 2023

Background: Inner Mongolia, desertification is happening due to climate change and land use alterations. In order to evaluate desert restoration effectiveness, this study compares number of species and species diversity in restored (with planted trees), unrestored area, and the reference ecosystem (Ref-E, typical steppe and woody steppe). Results: The Ref-E had the most plant species (64 taxa), while the unrestored area had the fewest (5 taxa). Among restored areas (restored in 2012, 2008, 2005), older restoration sites had more species (18-42). Similarly, species richness (3.93-0.41) and diversity (1.99-0.40) were highest in the Ref-E and lowest in unrestored areas, with older restored sites having higher values. Conclusions: More plant species and diversity in older restoration areas suggest progress toward ecosystem stabilization, approaching the Ref-E. Therefore, tree planting in Inner Mongolia's Hulunbuir semi-arid desert is a successful restoration effort.

• Journal of Ecology and Environment
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• 제35권4호
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• pp.301-306
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• 2012

Determination of the minimum population size is an important component for the ex situ conservation of an endangered species. Here, we present the identification of collection strategies that most efficiently captured the genetic diversity of Brasenia schreberi J.F. Gmelin (water-shield) in natural populations from the mainland (MGC) and Jeju Island (JNS) of South Korea, using amplified fragment length polymorphism (AFLP) markers. A total of 313 and 383 polymorphic bands were detected in the MGC and JNS populations, respectively. All of the 140 sampled ramets were distinguishable by the presence of distinct AFLP phenotypes. According to the simulation of the individual sampling by maximization sampling, 25 and 28 individuals captured all of the genetic diversity in the MGC population (mainland of South Korea) and the JNS population (Jeju Island), respectively. The level of genetic diversity of the core collections was similar to the entire collection, indicating that the core collections very well represent the diversity of the entire collection. We therefore suggest a management unit of B. schreberi based on the genetic information for assessing the minimum population size for its ex situ conservation.

• 한국환경과학회지
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• 제7권3호
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• pp.243-250
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• 1998

We examined the genetic variation within the species, the patterns of genetic diversty between populations, thermostability variations of enzymes and temperature tolerances of Corbicula japonica from the two main rivers In Korea. Starch gel electrophoresis was used to examine the genetic variation of 22 locl. Henting experiments of electrophoresis under the condition of 40$\pm$5$^{\circ}$ for 15$\pm$5 min disclose thermostabllity differences, called heat-sensitive and heat-resistant types, within each 디ectrophoretic allozyme. Genetic diversity at the natural species level was high (77.3%), whereas the extent of heat-treat groups was relatively low (52.6%). The genetic diversity trends to decrease from the source of two main siderable high genetic diversity compared with a mean value of C. japonica species, It is recommended that several populations of the species in Korea should be preserved.

• Journal of Microbiology and Biotechnology
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• 제22권1호
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• pp.13-24
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• 2012

The genetic diversity of plant growth-promoting rhizobacterial (PGPR) fluorescent pseudomonads associated with the sugarcane (Saccharum officinarum L.) rhizosphere was analyzed. Selected isolates were screened for plant growthpromoting properties including production of indole acetic acid, phosphate solubilization, denitrification ability, and production of antifungal metabolites. Furthermore, 16S rDNA sequence analysis was performed to identify and differentiate these isolates. Based on 16S rDNA sequence similarity, the isolates were designated as Pseudomonas plecoglossicida, P. fluorescens, P. libaniensis, and P. aeruginosa. Differentiation of isolates belonging to the same group was achieved through different genomic DNA fingerprinting techniques, including randomly amplified polymorphic DNA (RAPD), amplified ribosomal DNA restriction analysis (ARDRA), repetitive extragenic palindromic (REP), enterobacterial repetitive intergenic consensus (ERIC), and bacterial repetitive BOX elements (BOX) analyses. The genetic diversity observed among the isolates and rep-PCR-generated fingerprinting patterns revealed that PGPR fluorescent pseudomonads are associated with the rhizosphere of sugarcane and that P. plecoglossicida is a dominant species. The knowledge obtained herein regarding the genetic and functional diversity of fluorescent pseudomonads associated with the sugarcane rhizosphere is useful for understanding their ecological role and potential utilization in sustainable agriculture.

• 한국균학회지
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• 제48권1호
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• pp.47-53
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• 2020

During a survey of fungal diversity in different provinces of South Korea in 2017, a new fungal isolate was discovered. This fungal isolate was identified as Westerdykella reniformis, based on its morphological characteristics and phylogenetic analysis, using internal transcribed spacer (ITS) and 28S ribosomal DNA (28S rDNA) sequence data. To our knowledge, W. reniformis has not previously been reported in South Korea. Thus, in this study, we report a new record of a species from the Dothideomycetes class in Korea, and provide a detailed description with morphological illustrations.

• Journal of Microbiology and Biotechnology
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• 제29권2호
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• pp.292-296
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• 2019

Soils amended for long-term with high levels of compost demonstrated greater abundance of bacterial members of the phylum Bacteroidetes whereas a decreasing trend in the relative abundance of phylum Acidobacteria was noted with increasing levels of compost. Metabolic profiles predicted by PICRUSt demonstrated differences in functional responses of the bacterial community according to the treatments. Soils amended with lower compost levels were characterized by abundance of genes encoding enzymes contributing to membrane transport and cell growth whereas genes encoding enzymes related to protein folding and transcription were enriched in soils amended with high levels of compost. Thus, the results of the current study provide extensive evidence of the influence of different compost levels on bacterial diversity and community structure in paddy soils.

• Journal of Species Research
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• 제11권2호
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• pp.79-88
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• 2022

The Ulvophyceae are a diverse group and most species are distributed in marine environments, however, a smaller diversity occurs in freshwater and terrestrial habitats. Also, the diversity of species belonging to Ulvophyceae has been superficially investigated in Korea. Here, we identify two freshwater ulvophycean species based on the morphology, ultrastructural observation, and phylogenetic analysis. As a result, their taxonomic classifications are as follows: order Ulvales Blackman and Tansley, 1902 - family Kornmanniaceae Golden and Cole, 1986 - Lithotrichon pulchrum Darienko and Proschold 2017; order Ulotrichales Borzi, 1895 - family Tupiellaceae Skaloud and Leliaert, 2018 - Tupiella speciosa Darienko and Proschold 2017. The family Tupiellaceae and the two genera Lithotrichon and Tupiella are reported for the first time in Korea.

• 환경생물
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• 제32권4호
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• pp.397-402
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• 2014

1992년 6월 브라질 리우데자네이루에서 생물다양성협약(Convention on Biological Diversity, CBD)에 158개국이 서명한 이후, 현재 194개국 당사국들은 자국의 이익을 위해 다양한 형태로 논의에 참여하고 있다. 그리고 생물다양성협약 유전자원에 대한 접근 및 이익 공유(Access to genetic resources and Benefit-Sharing, ABS)를 다룬 나고야의정서가 채택되어 2014년 10월 12일에 발효 되었다. 이러한 상황에서 생물다양성협약 및 나고야의정서 발효가 해양생물다양성을 연구하는 연구자들에게 어떠한 영향을 미칠 것인가는 상당히 중요한 문제이다. 그러나 지난 생물다양성총회에서 해양 및 해양생물자원에 대한 관심은 비교적 적었으며, 이에 따라, 이와 관련된 논의도 늦어졌다. 하지만 이번 제12차 평창 생물다양성총회에서 생물학적 또는 생태학적 중요해역 (Ecologi-cally or Biologically Significant marine Areas, 이하 EBSA) 및 기타 해양관련 문제를 논의하였다. 우리나라는 나고야 의정서에 아직 정식으로 가입하지 않았지만 유전자원 이용 시 사전통보승인(Prior and Informed consent, PIC) 및 상호합의조건 (Mutually Agreed Terms, MAT) 그리고 다자간 이익공유체계 (Global Multilateral Benefit-Sharing Mechanism, GMBSM)를 중심으로 다양한 논의가 이루어졌다. 우리나라는 생물자원 보유국으로서 정부는 국내 생물자원의 관리체계 및 법률을 빠르게 정비하여야 한다. 또한 이용국으로서 학계 및 산업계가 국외의 생물자원을 보다 쉽고 효율적으로 이용하도록 정보체계를 구축할 필요가 있다고 판단된다.

• Journal of Microbiology and Biotechnology
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• 제25권1호
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• pp.1-10
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• 2015

The bacterial diversity of 10 marine sponges belonging to the species Cliona celata, an unidentified Cliona species, Haliclona cinerea, Halichondria okadai, Hymeniacidon sinapium, Lissodendoryx isodictyalis, Penares incrustans, Spirastrella abata, and Spirastrella panis collected from Jeju Island and Chuja Island was investigated using amplicon pyrosequencing of the 16S rRNA genes. The microbial diversity of these sponges has as of yet rarely or never been investigated. All sponges, except Cliona celata, Lissodendoryx isodictyalis, and Penares incrustans, showed simple bacterial diversity, in which one or two bacterial OTUs occupied more than 50% of the pyrosequencing reads and their OTU rank abundance curves saturated quickly. Most of the predominant OTUs belonged to Alpha-, Beta-, or Gammaproteobacteria. Some of the OTUs from the sponges with low diversity were distantly (88%~89%) or moderately (93%~97%) related to known sequences in the GenBank nucleotide database. Phylogenetic analysis showed that many of the representative sequences of the OTUs were related to the sequences originating from sponges and corals, and formed sponge-specific or -related clades. The marine sponges investigated herein harbored unexplored bacterial diversity, and further studies should be done to understand the microbes present in sponges.

• Proceedings of the National Institute of Ecology of the Republic of Korea
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• 제2권2호
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• pp.120-128
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• 2021

The objective of this study was to analyze the genotype of black-spotted pond frog (Pelophylax nigromaculatus) using seven microsatellite loci to quantify its genetic diversity and population structure throughout the spatial scale of basins of Han, Geum, Yeongsan, and Nakdong Rivers in South Korea. Genetic diversities in these four areas were compared using diversity index and inbreeding coefficient obtained from the number and frequency of alleles as well as heterozygosity. Additionally, the population structure was confirmed with population differentiation, Nei's genetic distance, multivariate analysis, and Bayesian clustering analysis. Interestingly, a negative genetic diversity pattern was observed in the Han River basin, indicating possible recent habitat disturbances or population declines. In contrast, a positive genetic diversity pattern was found for the population in the Nakdong River basin that had remained the most stable. Results of population structure suggested that populations of black-spotted pond frogs distributed in these four river basins were genetically independent. In particular, the population of the Nakdong River basin had the greatest genetic distance, indicating that it might have originated from an independent population. These results support the use of genetics in addition to designations strictly based on geographic stream areas to define the spatial scale of populations for management and conservation practices.