• The Plant Pathology Journal
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• 제39권5호
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• pp.486-493
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• 2023

Cowpea mild mottle virus (CPMMV) is a global plant virus that poses a threat to the production and quality of legume crops. Early and accurate diagnosis is essential for effective managing CPMMV outbreaks. With the advancement in isothermal recombinase polymerase amplification and lateral flow strips technologies, more rapid and sensitive methods have become available for detecting this pathogen. In this study, we have developed a reverse transcription recombinase polymerase amplification combined with lateral flow strips (RT-RPA-LFS) method for the detection of CPMMV, specifically targeting the CPMMV coat protein (CP) gene. The RT-RPA-LFS assay only requires 20 min at 40℃ and demonstrates high specificity. Its detection limit was 10 copies/µl, which is approximately up to 100 times more sensitive than RT-PCR on agarose gel electrophoresis. The developed RT-RPA-LFS method offers a rapid, convenient, and sensitive approach for field detection of CPMMV, which contribute to controlling the spread of the virus.

• 한국임상약학회지
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• 제26권2호
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• pp.121-127
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• 2016

Objective: Until now, there is minimal number of research for overall domestic status of orphan drug use in Korea. The purpose of this study is to identify the list of orphan drugs available in Korea and to understand the status of orphan drug usage in tertiary Hospitals and rare incurable disease Hospital. Methods: We made domestic orphan drug lists based on available orphan drugs in Korea. Based on this lists, we conducted e-mail survey from August, 2014 to September, 2014 to identify domestic status of orphan drug usage including the availability and management of orphan drugs. Results: There are three hundred and eighteen orphan drugs (184 ingredients) registered in Ministry of Food and Drug Safety. Among the three hundred and eighteen orphan drugs, Two hundred and twenty-eight drugs (102 ingredients) were selected. Information on each item was collected and documented with generic and brand names, manufacturers, wholesalers, indications, FDA approval status and insurance coverage. Forty-three tertiary hospitals and thirty-two rare incurable hospitals responded to the survey questionnaire (57.3%). According to the survey result, the antineoplastics and immunomodulating agents group has the highest percentage (40%) usage in the hospital. Of fortythree tertiary hospitals, thirteen hospitals manage orphan drugs separately (30.2%). Based on the reply, most of the healthcare professionals commented the drug information related to efficacy and safety including medication counseling of orphan drugs is insufficient. Conclusion: Through this study we anticipate providing an understanding of orphan drug usage status in Korea. We found the limited resources to the information on orphan drugs and this information requires updating on a regular basis. This can be the basis for further studies about preparing drug information, educational resources for rare disease patients.

• Journal of Hospice and Palliative Care
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• 제12권4호
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• pp.177-193
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• 2009

완화의학에서 환자의 평가는 치료의 의사결정과 그 결과에 이르기까지 중요한 역할을 한다. 평가도구의 사용 목적은 이를 환자 진료에 반영하여 개개인 환자와 가족들에 대한 돌봄의 질을 높이는 데 있다. 환자의 기능 상태와 통증 및 비 통증 증상을 평가하는 다양한 단일 영역 및 다차원 평가 척도들이 사용 가능하며, 삶의 질을 측정하는 다양한 도구들이 존재한다. 삶의 질이나 증상 측정에서 우월하다고 추천되는 단일 도구는 없는 실정이다. 도구마다 측정하는 시간의 틀이 다르고, 특성이 다르므로 사용 목적과 상황에 따라 적절한 도구를 선택하여야 한다. 여명 예측을 위해서는 예후 지수의 병용이 권고되는 추세이고, 웹을 기반으로 하는 예측 프로그램들도 등장하였다. 예후지수로는 최근 우리나라에서 다기관 연구를 통해 개발한 객관적 예후지수가 임상적인 여명 예측을 포함하지 않으면서 새로운 객관적인 예후 요인을 반영하여, 누구나 쉽게 사용이 가능하다. 완화의학 입문자의 경우 상대적으로 사용이 용이한 도구가 좋다. 따라서 기능의 평가에는 Eastern Cooperative Oncology Group 기능지수를 사용하고, 통증에서는 10점만점의 숫자 통증 등급(Numeric Rating Scale) 도구를 활용하면서 초기 통증 평가로는 간이 통증 조사지를 추천한다. 여러 가지 증상을 한꺼번에 측정하기 위해서는 숫자 등급으로 직접 물어보거나 혹은 M.D. Anderson 증상조사지(the Korean version of MD Anderson Symptom Inventory) 설문지를 사용하기 바란다. 삶의 질을 평가하는데에는 European Organization Research and Treatment Quality of Life Questionnaire Core 15 for Palliative Care, 예후 지수로는 객관적 예후 지수(Objective Prognostic Score)를 사용하기를 권한다. 향후 완화의학에서 평가도구의 발전방향은 국제 공동 연구의 활성화와 디지털 기기를 통한환자 보고의 전산화이고, 머지않은 앞날에 우리나라에도 이러한 경향이 도입될 것이다.

• 한국육종학회지
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• 제40권1호
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• pp.1-7
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• 2008

An attempt was made to link rice embryo proteins to DNA sequences and to understand their functions. One hundred of the 700 spots detected on the embryo 2-DE gels were microsequenced. Of these, 28% of the embryo proteins were matched to DNA sequences with known functions, but 72% of the proteins were unknown in functions as previously reported (Woo et al. 2002). In addition, twenty-four protein spots with 100% of homology and nine with over 80% were matched to ESTs (expressed sequence tags) after expanding the amino acid sequences of the protein spots by Database searches using the available rice EST databases at the NCBI (http://www/ncbi.nlm.nih.gov/) and DDBJ (http://www.ddbj.nig.ac.jp/). The chromosomal location of some proteins were also obtained from the rice genetic map provided by Japanese Rice Genome Research Program (http://rgp.dna.affrc.go.jp). The DNA sequence databases including EST have been reported for rice (Oryza sativa L.) now provides whole or partial gene sequence, and recent advances in protein characterization allow the linking proteins to DNA sequences in the functional analysis. This work shows that proteome analysis could be a useful tool strategy to link sequence information and to functional genomics.

• International Journal of Industrial Entomology and Biomaterials
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• 제43권2호
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• pp.67-77
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• 2021

Salurnis marginella Guérin-Méneville, 1829 (Hemiptera: Flatidae) is an invasive species first reported in 2003 in Iksan, which is located in the mid-western region of South Korea, and subsequently found in the nearby regions in 2005. However, molecular-perspective reports on their invasive characteristics are not yet available. In this study, population genetic characteristics of Korean S. marginella were evaluated using the mitochondrial COI region and sequencing 124 individual samples collected in 11 Korean localities. A total of 12 haplotypes were identified with a maximum sequence divergence of 1.368% (9 bp). Haplotype diversity was relatively higher than that of other insect species invaded into Korea, providing 2-6 haplotypes per populations, indicating that introduction to Korea may have happened rather extensively and consistently. Nucleotide diversity (π) was the highest in Iksan but owing to the limited sample size (three individuals) from this locality, additional studies are required for drawing conclusive inference regarding the place of entry to Korea. Ulsan, the easternmost population in the present study, revealed nearly the lowest diversity estimates, such as the lowest H and the second-lowest π; a unique haplogroup with a higher frequency; and an independent genetic cluster, suggesting that the introduction of S. marginella to Ulsan was an independent event. Further collection in Korea and neighboring countries, including the original distributional range is necessary to elucidate the invasive dynamics of S. marginella

• 한국토양비료학회지
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• 제32권3호
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• pp.261-267
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• 1999

본 연구는 인이 축적된 토양을 대상으로 작물 연속 재배에 따른 토양 유효 인 함량의 경시적 변화를 고찰함은 물론 이를 근거로 하여 인이 축적된 토양이 작물생장 적정 수준 이상의 인을 공급할 수 있는 기간을 예측하여 토양에 축적된 인의 효율적 이용에 기여하고자 수행되었다. 공시 토양은 인이 과잉 집적됨으로써 10% 미만의 시비인 회수율을 보였으며, 인 무처리구의 작물 생산량은 추천시비량을 시비한 경우의 88% 이상으로 나타나 시비 수준에 따른 작물체 생장 차이는 없었던 것으로 판단할 수 있었다. 인산질 비료를 무시비한 상태에서 연속 4회 작물 재배한 후에도 토양 유효인은 여전히 높은 수준 (Bray 1-P : $410{\sim}610mg\;P\;kg^{-1}$, Olsen-P : $284{\sim}401mg\;P\;kg^{-1}$, Lancaster-P : $368{\sim}524mg\;P\;kg^{-1}$, 가용성인: $37{\sim}55mg\;P\;kg^{-1}$)을 유지하였다. 토양 유효인의 감소량과 작물에 의해 흡수된 인 사이에는 유의성있는 상관관계 (Bray 1-P : $R^2=0.536^{**}{\sim}0.761^{**}$, Olsen-P : $R^2=0.642^{**}{\sim}0.774^{**}$, Lancaster-P : $R^2=0.513^{**}{\sim}0.797^{**}$)가 있었다. Soil 1 유효인 감소량(y)과 작물흡수한 인(x) 사이에 상관식은 다음과 같았다. Bray 1-P : y = 149.7x + 102.7 Lancaster-P : y = 209.2x-140.2 Olsen-P : y = 260.8x + 19.9 인 무처리구 토양의 유효인 함량(C)이 작물 재배회수(N)에 따라 감소하는 경향은 1차 반응 속도 방정식으로 나타낼 수 있었으며, 이 식을 통해서 유효인이 초기함량의 절반이나 인 유효도 한계 치까지 감소하는 데 소요되는 작물 재배 회수를 예측할 수 있었다. Soil 1의 유효인 감소 속도 방정식은 다음과 같았다. Bray 1-P : In(C) = -0.12N + 6.96 r=-0.991, Lancaster - P : In(C) = -0.14N + 6.88 r=-0.938. Olsen-P : In(C) = -0.07N + 6.37 r=-0.959.

• Bioinformatics and Biosystems
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• 제1권2호
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• pp.115-122
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• 2006

A three-dimensional pharmacophore model was developed based on 24 currently available inhibitors, which were rationally selected from 472 compounds with diverse molecular structure and bioactivity, for generating pharmacophore of uPA (Urokinase Plasminogen Activator) inhibitors. The best hypothesis (Hypo1) comprised of five features, namely, one positive ionizable group, one hydrogen-bond acceptor group and three hydrophobic aromatic groups. The correlation coefficient, root mean square deviation and cost difference were 0.973, 0.695, and 94.291 respectively, suggesting that a highly predictive pharmacophore model was successfully obtained. The application of the model showed great success in predicting the activities of 251 known uPA inhibitors (test set) with a correlation coefficient of 0.837, and there was also none of the outcome hypotheses that had similar cost difference and RMS deviation (RMSD) with that of the initial hypothesis generated by Cat-Scramble validation test with 95% confidence level. Accordingly, our model should be reliable in identifying structurally diverse compounds with desired biological activity.

• 한국도로학회논문집
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• 제18권6호
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• pp.131-136
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• 2016

OBJECTIVES : The objective of this research is to determine the integrity of pavement structures for areas where voids exist. Furthermore, we conducted the study of voided-area analysis and remaining life prediction for pavement structures using finite element method. METHODS : To determine the remaining life of the existing voided areas under asphalt concrete pavements, field and falling weight deflectometer (FWD) tests were conducted. Comparison methods were used to have better accuracy in the finite element method (FEM) analysis compared to the measured surface displacements due to the loaded trucks. In addition, the modeled FEM used in this study was compared with well-known software programs. RESULTS : The results show that a good agreement on the analyzed and measured displacements can be obtained through comparisons of the surface displacement due to loaded trucks. Furthermore, the modeled FEM program was compared with the available pavement-structure software programs, resulting in the same values of tensile strains in terms of the thickness of asphalt concrete layers. CONCLUSIONS : The study, which is related to voided-area analysis and remaining life prediction using FEM for pavement structures, was successfully conducted based on the comparison between our methods and the sinkhole grade used in Japan.

• Molecules and Cells
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• 제39권11호
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• pp.827-833
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• 2016

Regulator of calcineurin 1 (RCAN1) binds to calcineurin through the PxIxIT motif, which is evolutionarily conserved. SP repeat phosphorylation in RCAN1 is required for its complete function. The specific interaction between RCAN1 and calcineurin is critical for calcium/calmodulin-dependent regulation of calcineurin serine/threonine phosphatase activity. In this study, we investigated two available deletion rcan-1 mutants in Caenorhabditis elegans, which proceed differently for transcription and translation. We found that rcan-1 may be required for calcineurin activity and possess calcineurin-independent function in body growth and egg-laying behavior. In the genetic background of enhanced calcineurin activity, the rcan-1 mutant expressing a truncated RCAN-1 which retains the calcineurin-binding PxIxIT motif but misses SP repeats stimulated growth, while rcan-1 lack mutant resulted in hyperactive egg-laying suppression. These data suggest rcan-1 has unknown functions independent of calcineurin, and may be a stimulatory calcineurin regulator under certain circumstances.

• 한국주거학회:학술대회논문집
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• 한국주거학회 2009년 춘계학술발표대회 논문집
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• pp.355-360
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• 2009

Nowadays, the condition of overcrowded cities has raised a question which is insufficient land in cities, and has gotten worse because of the influx of the population continuously. It has rapidly constructed a skyscraper increasingly that the solution to secure a living space against these overcrowded cities until 2000, but these are already positioning itself as one of the new type of residence. The necessity of skyscraper as facilities of residence inside cities has be available both a solution for overcrowded cities and a meaning for a symbol of its represented a landmark. However, constructing skyscrapers indiscreetly can not guarantee dweller's life environment, and it contains risks unless design and facilities criteria are provided. Now, a skyscraper as a new substitute constituting a living space in the future for overcrowded cities deals with a systematic correlation between a city and construction. Therefore the aim of this study were to indicate a method for improvement of dweller's life environment at skyscraper through establishing a point of reference to inculcate them for a sustainable skyscraper from now on.