• Title/Summary/Keyword: aquatic adaptation

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Molecular adaptation of the CREB-Binding Protein for aquatic living in cetaceans

  • Jeong, Jae-Yeon;Chung, Ok Sung;Ko, Young-Joon;Lee, Kyeong Won;Cho, Yun Sung;Bhak, Jong;Yim, Hyung-Soon;Lee, Jung-Hyun
    • Journal of Marine Bioscience and Biotechnology
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    • v.6 no.2
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    • pp.102-109
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    • 2014
  • Cetaceans (whales, dolphins, and porpoises) are aquatic mammals that experienced drastic changes during the transition from terrestrial to aquatic environment. Morphological changes include streamlined body, alterations in the face, transformation of the forelimbs into flippers, disappearance of the hindlimbs and the acquisition of flukes on the tail. For a prolonged diving, cetaceans acquired hypoxia-resistance by developing various anatomical and physiological changes. However, molecular mechanisms underlying these adaptations are still limited. CREB-binding protein (CREBBP) is a transcriptional co-activator critical for embryonic development, growth control, metabolic homeostasis and responses to hypoxia. Natural selection analysis of five cetacean CREBBPs compared with those from 15 terrestrial relatives revealed strong purifying selection, supporting the importance of its role in mammals. However, prediction for amino acid changes that elicit functional difference of CREBBP identified three cetacean specific changes localized within a region required for interaction with SRCAP and in proximal regions to KIX domain of CREBBP. Mutations in CREBBP or SRCAP are known to cause craniofacial and skeletal defects in human, and KIX domain of CREBBP serves as a docking site for transcription factors including c-Myb, an essential regulator of haematopoiesis. In these respects, our study provides interesting insights into the functional adaptation of cetacean CREBBP for aquatic lifestyle.

i-Tree Canopy-based Decision Support Method for Establishing Climate Change Adaptive Urban Forests (기후변화적응형 도시림 조성을 위한 i-Tree Canopy 기반 의사결정지원 방안)

  • Tae Han Kim;Jae Young Lee;Chang Gil Song;Ji Eun Oh
    • Journal of the Semiconductor & Display Technology
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    • v.23 no.1
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    • pp.12-18
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    • 2024
  • The accelerated pace of climate crisis due to continuous industrialization and greenhouse gas emissions necessitates sustainable solutions that simultaneously address mitigation and adaptation to climate change. Naturebased Solutions (NbS) have gained prominence as viable approaches, with Green Infrastructure being a representative NbS. Green Infrastructure involves securing green spaces within urban areas, providing diverse climate adaptation functions such as removal of various air pollutants, carbon sequestration, and isolation. The proliferation of Green Infrastructure is influenced by the quantification of improvement effects related to various projects. To support decision-making by assessing the climate vulnerability of Green Infrastructure, the U.S. Department of Agriculture (USDA) has developed i-Tree Tools. This study proposes a comprehensive evaluation approach for climate change adaptation types by quantifying the climate adaptation performance of urban Green Infrastructure. Using i-Tree Canopy, the analysis focuses on five urban green spaces covering more than 30 hectares, considering the tree ratio relative to the total area. The evaluation encompasses aspects of thermal environment, aquatic environment, and atmospheric environment to assess the overall eco-friendliness in terms of climate change adaptation. The results indicate that an increase in the tree ratio correlates with improved eco-friendliness in terms of thermal, aquatic, and atmospheric environments. In particular, it is necessary to prioritize consideration of the water environment sector in order to realize climate change adaptive green infrastructure, such as increasing green space in urban areas, as it has been confirmed that four out of five target sites are specialized in improving the water environment.

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Initial Adaptation of Released Black Sea Bream, Acanthopagrus schlegeli in Gamak Bay, Southern Coast in Korea (가막만 방류 감성돔 (Acanthopagrus schlegeli) 치어의 초기 적응)

  • YOO Jin Hyung;HWANG Doo Jin;YOON Yang Ho;JEONG Gwan Sic;GO Hyun Jeung
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.36 no.4
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    • pp.365-371
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    • 2003
  • The reared fries of black sea bream, Acanthopagrus schlegeli were released in Gamak Bay and initial adaptation to the environment was evaluated. Thirty thousand fries were marked with magnetic tag, released and recaptured and its stomach content were analysed; the neighboring zooplankton, beuthic algae and other young fishes were investigated. The fries were released on July 30, 2001 in summer season. Water temperature of surface and bottom were $24^{\circ}C\;and\;21^{\circ}C,$ respectively. $Chlorophyll\;\alpha$ content was 4.5 ${\mu}g/L$ with high primary production. Salinity was $32.0-32.5\%_{\circ}.$ Water depth of releasing site was about 30 m. The sea jungle was formed at the first point of releasing and it kept the fries for about 3 days in the bay with plenty of food organisms within 5 m depth. Stomach analysis of the fries revealed that real feeding started from the 15 days after releasing and full feeding took place after the tenth day.

Swimming Performance of Aquatic-animals and Their Morphological Adaptation (수중동물의 헤엄침 성능과 형태학적 적응)

  • Sohn, Myong-Hwan;Lee, Seung-Hee;Han, Cheol-Heui
    • Journal of the Korea Institute of Military Science and Technology
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    • v.12 no.6
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    • pp.796-807
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    • 2009
  • The swimming abilities of aquatic-animals are of vital importance to their ecology. The relationship between outer shapes and the swimming ability has been focused just a few centuries ago by engineering community. Present paper surveys the recent studies of the aquatic-animals' swimming performance in the morphological point of view. Also an experimental study is performed in order to investigate the effect of the tail fin's shape on the propulsive performance. The result showed that the morphological study provided valuable data for exploring the secrets of the aquatic-animals' swimming performance.

Molecular Cloning of Insulin-like Growth Factor-I (IGF-I) and IGF-II Genes of Marine Medaka (Oryzias dancena) and Their Expression in Response to Abrupt Transfer from Freshwater to Seawater

  • Kang, Yue-Jai;Kim, Ki-Hong
    • Fisheries and Aquatic Sciences
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    • v.13 no.3
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    • pp.224-230
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    • 2010
  • Growth hormone (GH) is known as one of the main osmoregulators in euryhaline teleosts during seawater (SW) adaptation. Many of the physiological actions of GH are mediated through insulin-like growth factor-I (IGF-I), and the GH/IGF-I axis is associated with osmoregulation of fish during SW acclimation. However, little information is available on the response of fish IGF-II to hyperosmotic stress. Here we present the first cloned IGF-I and IGF-II cDNAs of marine medaka, Oryzias dancena, and an analysis of the molecular characteristics of the genes. The marine medaka IGF-I cDNA is 1,340 bp long with a 257-bp 5' untranslated region (UTR), a 528 bp 3' UTR, and a 555-bp open reading frame (ORF) encoding a propeptide of 184 amino acid (aa) residues. The full-length marine medaka IGF-II cDNA consists of a 639 bp ORF encoding 212 aa, a 109 bp 5' UTR, and a 416 bp 3' UTR. Homology comparison of the deduced aa sequences with other IGF-Is and IGF-IIs showed that these genes in marine medaka shared high structural homology with orthologs from other teleost as well as mammalian species, suggesting high conservation of IGFs throughout vertebrates. The IGF-I mRNA level increased following transfer of marine medaka from freshwater (FW) to SW, and the expression level was higher than that of the control group, which was maintained in FW. This significantly elevated IGF-I level was maintained throughout the experiment (14 days), suggesting that in marine medaka, IGF-I is deeply involved in the adaptation to abrupt salinity change. In contrast to IGF-I, the increased level of marine medaka IGF-II mRNA was only maintained for a short period, and quickly returned a level similar to that of the control group, suggesting that marine medaka IGF-II might be a gene that responds to acute stress or one that produces a supplemental protein to assist with the osmoregulatory function of IGF-I during an early phase of salinity change.

Prediction of Hypoxia-inducible Factor Binding Site in Whale Genome and Analysis of Target Genes Regulated by Predicted Sites (고래의 게놈에서 hypoxia-inducible factor binding site의 예측과 target gene에 대한 분석)

  • Yim, Hyung-Soon;Lee, Jae-Hak
    • Journal of Marine Bioscience and Biotechnology
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    • v.7 no.2
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    • pp.35-41
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    • 2015
  • Whales are marine mammals that are fully adapted to aquatic environment. Whales breathe by lungs so they require adaptive system to low oxygen concentration (hypoxia) while deep and prolonged diving. However, the study for the molecular mechanism underlying cetacean adaptation to hypoxia has been limited. Hypoxia-inducible factor (HIF) is the central transcription factor that regulates hypoxia-related gene expression. Here we identified HIF-binding sites in whale genome by phylogenetic footprinting and analyzed HIF-target genes to understand how whales cope with hypoxia. By comparison with the HIF-target genes of terrestrial mammals, it was suggested that whales may retain unique adaptation mechanisms to hypoxia.

Use of Dietary Salt to Rainbow Trout (Oncorhynchus mykiss) for Increasing Seawater Adaptability (무지개송어(Onchorhynchus mykiss)의 해수 적응 능력 개선을 위한 식염사료의 적용)

  • Kim, Pyong-Kih;Kim, You-Hee;Jeon, Joong-Kyun
    • Journal of Aquaculture
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    • v.18 no.2
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    • pp.69-75
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    • 2005
  • One 30-day feeding trial was conducted to examine the effects of dietary salt on seawater adaptability of rainbow trout (Onchorhynchus mykiss) fed three experimental diets containing 0% (control), 4% and 8% salt. The experimetal period included 30 days of feeding trial in freshwater, 3 days of the step by step seawater acclimation with-out feeding diets, and 21 more days of seawater adaptation period (not with all experimental fish) with feeding the basal diet. Growth rates from triplicate groups were determined fur 30 days of feeding trial. Blood samples were taken at the begining and at the end of feeding trial, and 3 times (on 1st, 4th and 8th day) of the seawater adaptation period. Daily survival rates of duplicate groups from three experimetal treatments were recorded for 21 days of the seawater adaptation period. Total average initial and final fish weight were $149.5{\pm}7.6\;and\;187.1{\pm}7.6g$. Feed efficiency of fish fed diets containing 4% and 8% salt were significantly better than those of fish fed the control diet. Average cumulative survival rates were 72, 80 and 88% from the control, 4% and 8% salt diets, respectively. Pulse rate per minutes decreased with dietary salt level. Serum $Na^+\;and\;Cl^-$ concentrations of fish fed 4% and 8% salt diets were significantly higher than those of fish fed the control diet (P<0.05), however, the concentrations were stabilized after 8 days of seawater adaptation. Serum cortisol, glucose, cholesterol and tryglyceride concentrations, and the osmorality of fish decreased with dietary salt level, these values were significantly lower than those of fish fed the control diet. These results indicated that the dietary supplementation of salt could have advantages for seawater adaptability of rainbow trout.

Physiological Adaptation of Nitrate Uptake by Phytoplankton Under Simulated Upwelling Conditions (모의 용승조건하에서 식물 플랑크톤 질산염 흡수기작의 생리적 적응)

  • YANG Sung Ryull
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.30 no.5
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    • pp.782-793
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    • 1997
  • To study the physiological adaptation (shift-up) of phytoplankton under the simulated upwelling conditions, nitrate uptake capacity of Dunaliella tertiolecta batch culture was measured in the laboratory using the stable isotope $^{15}N-KNO_3$. Contrary to the expected, there was no significant relationship between the maximum $V_{NO3}$ (nitrogen specific nitrate uptake rate) and the initial nitrate concentration. However, there was a strong relationship between the maximum $\rho_{NO3}$ (nitrate transport rate) and the initial nitrate concentration of $<25\;{\mu}M$, which was also influenced by the physiological status of the culture. The increase in $V_{NO3}$ was mainly due to the increase in PON (particulate organic nitrogen) concentration and partly due to the increase in $V_{NO3}$. When the phytoplankton population was severely shifted-down, the physiological adaptation of nitrate uptake was significantly inhibited at high initial nitrate concentrations. The timing of the maximum $V_{NO3}$ or $\rho_{NO3}$ was related to the initial nitrate concentration. At higher initial nitrate concentrations, maxima in $V_{NO3}$ and $\rho_{NO3}$ occurred 1 or 2 days later than at lower nitrate concentrations. This relationship was the opposite to the prediction from the shift-up model of Zimmerman et al. (1987), The shift-up process is apparently controlled by an internal time sequence and the initial nitrate concentration, but the magnitude of $V_{NO3}$ was affected little by changes in nitrate concentration.

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High Plasticity of the Gut Microbiome and Muscle Metabolome of Chinese Mitten Crab (Eriocheir sinensis) in Diverse Environments

  • Chen, Xiaowen;Chen, Haihong;Liu, Qinghua;Ni, Kangda;Ding, Rui;Wang, Jun;Wang, Chenghui
    • Journal of Microbiology and Biotechnology
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    • v.31 no.2
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    • pp.240-249
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    • 2021
  • Phenotypic plasticity is a rapid response mechanism that enables organisms to acclimate and survive in changing environments. The Chinese mitten crab (Eriocheir sinensis) survives and thrives in different and even introduced habitats, thereby indicating its high phenotypic plasticity. However, the underpinnings of the high plasticity of E. sinensis have not been comprehensively investigated. In this study, we conducted an integrated gut microbiome and muscle metabolome analysis on E. sinensis collected from three different environments, namely, an artificial pond, Yangcheng Lake, and Yangtze River, to uncover the mechanism of its high phenotypic plasticity. Our study presents three divergent gut microbiotas and muscle metabolic profiles that corresponded to the three environments. The composition and diversity of the core gut microbiota (Proteobacteria, Bacteroidetes, Tenericutes, and Firmicutes) varied among the different environments while the metabolites associated with amino acids, fatty acids, and terpene compounds displayed significantly different concentration levels. The results revealed that the gut microbiome community and muscle metabolome were significantly affected by the habitat environments. Our findings indicate the high phenotypic plasticity in terms of gut microbiome and muscle metabolome of E. sinensis when it faces environmental changes, which would also facilitate its acclimation and adaptation to diverse and even introduced environments.

Changes of the Osmolarity in Embryonic Body Fluid and the Maternal Ovarian Tissue of the Viviparous Teleost, Ditrema temmincki, during the Gestation Period (태생 경골어류, 망상어(Ditrema temmincki)의 임신기 동안 체내자어의 체액삼투압 및 모체 난소조직상의 변화)

  • LEE Jung Sick;CHIN Pyung
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.29 no.2
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    • pp.157-164
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    • 1996
  • Dry weight and body fluid osmolarity of embryo, and maternal ovarian fluid and the ovarian inner tissue of the viviparous teleost, Ditrema temmincki, changed considerably during the gestation period. After the complete absorption of the egg yolk, average dry weight of the embryo increased to 373.76 mg, and the range of total length (TL) was from 6.0 to 60.0 mm. Osmolarity of the embryonic body fluid was 796,8 mOsmol/kg with TL 64.0 mm right before parturition. Ovarian outer membrane started to swelling clearly after fertilization, and maximized in March. The swelling of ovigerous folds was maximized in late April. Expansion of blood vessels and increase of hemocytes reached to their maximum right before parturition. The results of this study indicated that these changes are related to the nutritional and environmental adaptation of both the embryo and the maternal body during the gestation period.

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