• Title/Summary/Keyword: Yagi

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Error-Prone and Error-Free Translesion DNA Synthesis over Site-Specifically Created DNA Adducts of Aryl Hydrocarbons (3-Nitrobenzanthrone and 4-Aminobiphenyl)

  • Yagi, kashi;Fujikawa, Yoshihiro;Sawai, Tomoko;Takamura-Enya, Takeji;Ito-Harashima, Sayoko;Kawanishi, Masanobu
    • Toxicological Research
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    • v.33 no.4
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    • pp.265-272
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    • 2017
  • Aryl hydrocarbons such as 3-nitrobenzanthrone (NBA), 4-aminobiphenyl (ABP), acetylaminofluorene (AAF), benzo(a)pyrene (BaP), and 1-nitropyrene (NP) form bulky DNA adducts when absorbed by mammalian cells. These chemicals are metabolically activated to reactive forms in mammalian cells and preferentially get attached covalently to the $N^2$ or C8 positions of guanine or the $N^6$ position of adenine. The proportion of $N^2$ and C8 guanine adducts in DNA differs among chemicals. Although these adducts block DNA replication, cells have a mechanism allowing to continue replication by bypassing these adducts: translesion DNA synthesis (TLS). TLS is performed by translesion DNA polymerases-Pol ${\eta}$, ${\kappa}$, ${\iota}$, and ${\zeta}$ and Rev1-in an error-free or error-prone manner. Regarding the NBA adducts, namely, 2-(2'-deoxyguanosin-$N^2$-yl)-3-aminobenzanthrone (dG-$N^2$-ABA) and N-(2'-deoxyguanosin-8-yl)-3-aminobenzanthrone (dG-C8-ABA), dG-$N^2$-ABA is produced more often than dG-C8-ABA, whereas dG-C8-ABA blocks DNA replication more strongly than dG-$N^2$-ABA. dG-$N^2$-ABA allows for a less error-prone bypass than dG-C8-ABA does. Pol ${\eta}$ and ${\kappa}$ are stronger contributors to TLS over dG-C8-ABA, and Pol ${\kappa}$ bypasses dG-C8-ABA in an error-prone manner. TLS efficiency and error-proneness are affected by the sequences surrounding the adduct, as demonstrated in our previous study on an ABP adduct, N-(2'-deoxyguanosine-8-yl)-4-aminobiphenyl (dG-C8-ABP). Elucidation of the general mechanisms determining efficiency, error-proneness, and the polymerases involved in TLS over various adducts is the next step in the research on TLS. These TLS studies will clarify the mechanisms underlying aryl hydrocarbon mutagenesis and carcinogenesis in more detail.

Home-ranges of Female Pipistrellus abramus (Chiroptera: Vespertilionidae) in Different Reproductive Stages Revealed by Radio-telemetry (원격무선추적을 이용한 집박쥐 암컷의 번식단계에 따른 행동권 분석)

  • Chung, Chul-Un;Han, Sang-Hoon;Kim, Sung-Dae;Lim, Chun-Woo;Kim, Sung-Chul;Kim, Chul-Young;Lee, Hwa-Jin;Kwon, Yong-Ho;Kim, Young-Chae;Lee, Chong-Il
    • Korean Journal of Environment and Ecology
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    • v.25 no.1
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    • pp.1-9
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    • 2011
  • In order to analyze the change in home ranges depending on the reproductive stage of Pipistrellus abramus, radio-tracking was carried out for a total of 9 individuals, 3 individuals each, by dividing stages into a pregnancy stage, lactation stage, and post-lactation stage from May to August 2009. For radio-telemetry, 0.38g transmitters, R2000 receivers and 3-element Yagi antennas were used. Pipistrellus abramus were captured using a double-stacked mist net and a harp-trap. Analysis of home ranges used a SHP File and ArcGIS 3.3 for GIS, and used a Kernel Home Range Method(KHR) and a Minimum Convex Polygon(MCP) Method for analysis. Home ranges at the pregnancy stage were MCP 100% $13.46{\pm}1.84ha$, MCP 95% $12.28{\pm}2.15ha$, KHR 50% $3.00{\pm}0.71ha$, and home ranges at the lactation stage were MCP 100% $8.13{\pm}0.23ha$, MCP 95% $7.73{\pm}0.63ha$, KHR 50%$1.84{\pm}1.05ha$. Home ranges at the post-lactation stage were MCP 100% $125.58{\pm}97.77ha$, MCP 95% $123.89{\pm}97.73ha$, KHR 50% $28.61{\pm}26.78ha$. As a result, home ranges of pipistrellus abramus showed a significant difference in all of the MCP 100%, MCP 95%, KHR 50% depending on reproductive stages, being largest in the post-lactation stage and smallest in the lactation stage.