• Title/Summary/Keyword: Wound segmentation

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Development of wound segmentation deep learning algorithm (딥러닝을 이용한 창상 분할 알고리즘 )

  • Hyunyoung Kang;Yeon-Woo Heo;Jae Joon Jeon;Seung-Won Jung;Jiye Kim;Sung Bin Park
    • Journal of Biomedical Engineering Research
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    • v.45 no.2
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    • pp.90-94
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    • 2024
  • Diagnosing wounds presents a significant challenge in clinical settings due to its complexity and the subjective assessments by clinicians. Wound deep learning algorithms quantitatively assess wounds, overcoming these challenges. However, a limitation in existing research is reliance on specific datasets. To address this limitation, we created a comprehensive dataset by combining open dataset with self-produced dataset to enhance clinical applicability. In the annotation process, machine learning based on Gradient Vector Flow (GVF) was utilized to improve objectivity and efficiency over time. Furthermore, the deep learning model was equipped U-net with residual blocks. Significant improvements were observed using the input dataset with images cropped to contain only the wound region of interest (ROI), as opposed to original sized dataset. As a result, the Dice score remarkably increased from 0.80 using the original dataset to 0.89 using the wound ROI crop dataset. This study highlights the need for diverse research using comprehensive datasets. In future study, we aim to further enhance and diversify our dataset to encompass different environments and ethnicities.

Efficient Cell Tracking Method for Automatic Analysis of Cellular Sequences (세포동영상의 자동분석을 위한 효율적인 세포추적방법)

  • Han, Chan-Hee;Song, In-Hwan;Lee, Si-Woong
    • The Journal of the Korea Contents Association
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    • v.11 no.5
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    • pp.32-40
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    • 2011
  • The tracking and analysis of cell activities in time-lapse sequences plays an important role in understanding complex biological processes such as the spread of the tumor, an invasion of the virus, the wound recovery and the cell division. For automatic tracking of cells, the tasks such as the cell detection at each frame, the investigation of the correspondence between cells in previous and current frames, the identification of the cell division and the recognition of new cells must be performed. This paper proposes an automatic cell tracking algorithm. In the first frame, the marker of each cell is extracted using the feature vector obtained by the analysis of cellular regions, and then the watershed algorithm is applied using the extracted markers to produce the cell segmentation. In subsequent frames, the segmentation results of the previous frame are incorporated in the segmentation process for the current frame. A combined criterion of geometric and intensity property of each cell region is used for the proper association between previous and current cells to obtain correct cell tracking. Simulation results show that the proposed method improves the tracking performance compared to the tracking method in Cellprofiler (the software package for automatic analysis of bioimages).

Developmental Changes of Blastema during Earthworm Tail Regeneration (지렁이 꼬리재생시 재생아의 형태발생에 관한 연구)

  • 조성진;이명식;허소영;신명주;박순철
    • The Korean Journal of Soil Zoology
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    • v.6 no.1_2
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    • pp.1-6
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    • 2001
  • Although the earthworm is an important animal species capable of regenerating missing body part, earthworm regeneration is not well understood at the tissue, cell and molecular levels. In order to understand the developmental changes of blastema during earthworm tail regeneration, the formation and development blastema during regeneration was investigated by histological analysis. Within 1 day after amputation, dediffentiating blastemal cells appeared in coelomic side of longitudinal muscle layer. At 3 days postamputation, proliferating blastemal cells migrated into coelum and blastema was formed beneath wound epithelium around 7 days after amputation. Segmentation of blastema was observed around 2 weeks after amputation followed by redifferentiation of nephridium, intestine, setae and septa.

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