• Title/Summary/Keyword: Variation plant

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Molecular Characterization of Hypernodulation in Soybean

  • Van, Kyu-Jung;Ha, Bo-Keun;Hwang, Eun-Young;Kim, Moon-Young;Heu, Sung-Gi;Lee, Suk-Ha
    • The Plant Pathology Journal
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    • v.19 no.1
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    • pp.24-29
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    • 2003
  • SS2-2, a hypernodulating soybean mutant was isolated by EMS mutagenesis from Sinpaldalkong 2. This auto-regulation mutant showed greater number of nodules and smaller plant size than its wild type Sinpaldalkong 2. SSR markers were used to identify DNA variation at SSR loci from different soybean LG. The only SSR marker that detected a length polymorphism between SS2-2 and its wild type ancestor was Satt294 on LG C1 instead of LG H, locating a hypernodulating gene. Sequencing data of flanking Satt294 indicated that the size variation was due to extra stretch of TTA repeats of the SSR motif in SS2-2, along with $A\longrightarrow$G transversion. In spite of phenotypic differences between the wild type and its hypernodulating mutants, genomic DNA poly-morphisms at microsatellite loci could not control regulation of nodule formation. The cDNA-AFLP method was applied to compare differential display of cDNA between Sinpaldalkong 2 and SS2-2. After isolation and sequence comparison with many AELP fragments, several interesting genes were identified. Northern blot analysis, immunolocalization and/or the yeast two-hybrid system with these genes might provide information on regulation of nodule development in SS2-2.

DNA Sequence Variation of Candidate Gene for Salt Tolerance in Soybean Mutant

  • Chang Yeok Moon;Byeong Hee Kang;Woon Ji Kim;Sreeparna Chowdhury;Sehee Kang;Seo Young Shin;Wonho Lee;Hyeon-Seok Lee;Bo-Keun Ha
    • Proceedings of the Korean Society of Crop Science Conference
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    • 2022.10a
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    • pp.259-259
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    • 2022
  • Soil salinity is a major factor that reduces crop yields. The amount of soil affected by salinity is about 83 million hectares (FAO 2000), which is increasing due to the effects of climate change. In soybean [Glycine max (L.) Merr.], nutritional properties such as protein, starch, and sucrose content together with biomass and yield tends to reduce due to excessive salt. As a result of QTL mapping using the 169 F2:3 population from the KA-1285 (salt-tolerant) × Daepung (salt-sensitive) in a previous study, two major QTLs (Gm03_39796778 and Gm03_40600088) related to salt tolerance were found on chromosome 3. In this study, the CDS region of the Gmsalt3 gene was analyzed using the ABI 3730x1 DNA Analyzer (Macrogen, Korea). The sequence of Gmsalt3 gene in KA-1285 was compared with Williams 82.a4.vl and PI483463 (Glycine soja). Two transversions were found at exon6 in KA-1285 and PI483463. Currently, whole genome sequencing and variation analysis using the Illumine Novaseq 6000 machine (Illumina, USA) are in progress. The results of this study can provide useful molecular markers for the selection of salt-tolerant soybeans and can be used as basic data for future salt-tolerant gene research.

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Influence of Plant Density on Growth, Yield and Nutritional Quality of Forage Rye

  • Kwon, Byung-Sun
    • Plant Resources
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    • v.7 no.3
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    • pp.170-173
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    • 2004
  • To determine optimal plant density of forage rye in southern areas of Korea, forage rye cv. Paldanghomil, the highest yielding variety among experimental varieties of forage rye, was grown under five different plant density. Yield components such as plant height, and number of leaves were highest at the broad casting. Plants sown at broadcasting also showed highest fresh and dry matter yield. When plants were grown of the broad casting, they showed higher values in content of crude protein and lower values in contents of crude fiber such as neutral detergent fiber(NDF), acid detergent fiber(ADF), cellulose and lignin. There was no relationship between variation of in vitro dry matter digestibility(IVDMD) and plant density. Plants sown at the broad casting showed highest digestible dry matter yields.

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Seismic responses of base-isolated nuclear power plant structures considering spatially varying ground motions

  • Sayed, Mohamed A.;Go, Sunghyuk;Cho, Sung Gook;Kim, Dookie
    • Structural Engineering and Mechanics
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    • v.54 no.1
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    • pp.169-188
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    • 2015
  • This study presents the effects of the spatial variation of ground motions in a hard rock site on the seismic responses of a base-isolated nuclear power plant (BI-NPP). Three structural models were studied for the BI-NPP supported by different number of lead rubber bearing (LRB) base isolators with different base mat dimensions. The seismic responses of the BI-NPP were analyzed and investigated under the uniform and spatial varying excitation of El Centro ground motion. In addition, the rotational degrees of freedom (DOFs) of the base mat nodes were taken to consider the flexural behavior of the base mat on the seismic responses under both uniform and spatial varying excitation. Finally, the seismic response results for all the analysis cases of the BI-NPP were investigated in terms of the vibration periods and mode shapes, lateral displacements, and base shear forces. The analysis results indicate that: (1) considering the flexural behavior of the base mat has a negligible effect on the lateral displacements of base isolators regardless of the number of the isolators or the type of excitation used; (2) considering the spatial variation of ground motions has a substantial influence on the lateral displacements of base isolators and the NPP stick model; (3) the ground motion spatial variation effect is more prominent on lateral displacements than base shear forces, particularly with increasing numbers of base isolators and neglecting flexural behavior of the base mat.

Variation in Agronomic Traits and Fatty Acid Compositions of the Seed Oil in Germplasm Collection of Brassica spp.

  • Ko, Ho-Cheol;Sung, Jung-Sook;Hur, On-Sook;Baek, Hyung-Jin;Lee, Myung-Chul;Luitel, Binod Prasad;Ryu, Kyoung-Yul;Rhee, Ju-Hee
    • Korean Journal of Plant Resources
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    • v.30 no.6
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    • pp.590-600
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    • 2017
  • A total of 447 accessions consisting of seven Brassica spp.; Brassica carinata (34), B. juncea (199), B. rapa subsp. dichotoma (18), B. rapa. subsp. oleifera (14), B. rapa subsp. rapa (36), B. rapa subsp. trilocularis (56) and B. alba subsp. alba (90) were studied for their morphological characters and fatty acid compositions. There was a wide variation for morphological traits, oil content and fatty acid composition among Brassica species. Seed number/silique and yield/plant were varied from 4.2 (B. alba) to 25.1 (B. rapa subsp. trilocularis) and from 170.7 g (B. rapa subsp. oleifera) to 351.9 g (B. juncea L. Czern.), respectively. Among Brassica species, B. rapa subsp. trilocularis exhibited the highest oil (29.2%), stearic (20.4%) and erucic acid (45.3%) content. B. carinata had the highest content of palmitic (5.2%), oleic (21.2%) and linolenic acid (11.1%). B. rapa subsp. dichotoma and B. rapa subsp. oleifera exhibited the highest content of linoleic (8.1%) and behenic (26.9%) acid, respectively. B. rapa subsp. trilocularis exhibited the highest (45.3%) erucic acid content and significant positive relationship was observed between oleic acid and linoleic acid. This variation of agronomic and fatty acid compositions in Brassica species can be utilized to develop new varieties.

Detection of DNA Instability Induced from Tissue Culture and Irradiation in Oryza sativa L. by RAPD Analysis

  • Kim, Dong-Sub;Lee, In-Sok;Hyun, Do-Yoon;Jang, Cheol-Seong;Song, Hi-Sup;Seo, Yong-Weon;Lee, Young-Il
    • Journal of Plant Biotechnology
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    • v.5 no.1
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    • pp.25-31
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    • 2003
  • As a consequence of tissue culture of rice, RAPD analysis was peformed to determine whether extended culture periods as undifferentiated calli affected the subsequent genetic constancy, and whether any resulting DNA rearrangements could be detected between sibling plants produced from the same callus. Somaclonal variation was induced at the initial stage of tissue culture and it increased with the length of culture maintenance. Of the 192 total bands, the number of polymorphic bands was 22 (11.5%), 33 (17.2%), and 49 (25.5%) in the callus of 1,3, and 6 months culture, respectively. A significantly higher level of genotypic polymorphisms between regenerants from two different somaclones was also detected, although all the regenerants were derived from a single genotype. In comparison of DNA polymorphisms between regenerants from non-irradiated and from irradiated calli, a scope of variation spectrum by gamma ray irradiation was larger than that by tissue culture. Consideration must be given to this genomic variation where attempts are to be made to use desirable somaclonal variants for plant breeding purpose and in genetic engineering program.

Cytological Analyses of Iris ruthenica K. Gawl. (Iridaceae), an Endangered Species in Korea

  • Choi, Bokyung;Temsch, Eva M.;Weiss-Schneeweiss, Hanna;So, Soonku;Myeong, Hyeon-Ho;Jang, Tae-Soo
    • Proceedings of the Plant Resources Society of Korea Conference
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    • 2019.10a
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    • pp.24-24
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    • 2019
  • Iris L. is a perennial genus comprising approximately 300 species worldwide, with the greatest number of endemic species occurring in Asia. Iris is one of the largest genera in the family Iridaceae and includes ca. 15 species native to Korea. Although chromosome number change, karyotype restructuring, and genome size variation play an important role in plant genome diversification, understanding the karyotype variation in Korean Iris species has been hampered by the wide range of base chromosome number (x = 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22) reported to date. This study documents the chromosome numbers, karyotype structure and genome size variation in Iris ruthenica K. Gawl., an endangered species in Korea obtained using classic Feulgen staining and flow cytometry. The chromosome number of all investigated plants from the nine populations was 2n = 42. All individuals studied possessed metacentric and submetacentric chromosomes. The genome size of the I. ruthenica in eight wild populations ranged from 2.39 pg/1C to 2.45 pg/1C ($2.42{\pm}0.02pg/1C$: $mean{\pm}SD$). This study provides the first report of genome size variation in Iris ruthenica in Korea. This study lays foundation for cytogenetic further analyses employing by fluorescence in situ hybridization (FISH) to better understand the chromosomal evolution in this species and in the whole genus.

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Water Quality Variations in Jinhae Bay by Dredging & Operating the Sewage Disposal Plant (마산만 준설사업 및 하수처리장 가동에 따른 진해만의 수질변동)

  • YOON SUK-JIN;LEE IN-CHEOL
    • Proceedings of the Korea Committee for Ocean Resources and Engineering Conference
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    • 2004.05a
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    • pp.117-122
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    • 2004
  • This study investigates the spatial and temporal distribution characteristics and relationships among water quality parameters, which based on 6 years' data(from 1989 to 1994) measured at 16 stations on Jinhae Bay. The results of these analysis, monthly variations range between surface and bottom layer of water quality had a tendency to increase and decrease, and appeared to be at the maximum value in August. The relationships between concentration of COD ana nutrients(DIN and DIP), which obtained by correlation analysis of water quality, were shown $85\%$ and $74\%$, respectively. Using the cluster analysis to develop the division of the sea basin by the dendrogram, before and after dredging of Masan bay and operating a sewage disposal plant, the variation characteristics of water quality of Jinhae Bay were discussed. Through it, we can see the serious pollution of northen sea basin of Jinhae Bay(B2) although dredging Masan bay and operating the sewage disposal plant. As the results, it doesn't appear the improvement effect of water quality in spite of carrying out the effort of water quality improvement.

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