• 제목/요약/키워드: Synthetic medium

검색결과 366건 처리시간 0.025초

Genomewide Profiling of Rapamycin Sensitivity in Saccharomyces cerevisiae on Synthetic Medium

  • Chang, Yeon-Ji;Shin, Chun-Shik;Han, Dong-Hun;Kim, Ji-Yun;Kim, Kang-In;Kwon, Yong-Min;Huh, Won-Ki
    • Genomics & Informatics
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    • 제8권4호
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    • pp.177-184
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    • 2010
  • The target of rapamycin (TOR) signaling pathway is a conserved pathway that regulates eukaryotic cell growth in response to environmental cues. Chemical genomic approaches that profile rapamycin sensitivity of yeast deletion strains have given insights into the function of TOR signaling pathway. In the present study, we analyzed the rapamycin sensitivity of yeast deletion library strains on synthetic medium. As a result, we identified 130 strains that are hypersensitive or resistant to rapamycin compared with wild-type cells. Among them, 36 genes are newly identified to be related to rapamycin sensitivity. Moreover, we found 16 strains that show alteration in rapamycin sensitivity between complex and synthetic media. We suggest that these genes may be involved in part of TOR signaling activities that is differentially regulated by media composition.

DOUBLE STARS AS TRACERS OF TINY STRUCTURES IN THE INTERSTELLAR MEDIUM

  • MORABBI, SOMAYEH;MIRTORABI, MOHAMMAD TAGHI
    • 천문학논총
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    • 제30권2호
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    • pp.89-91
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    • 2015
  • Observed spectra of stars around the Sun have indicated that the Sun is located in a gas cavity, extending to 100pc. This gas cavity is called the "Local Bubble". The density of the interstellar medium (ISM) in the local bubble is about one tenth that of the average for the ISM in the Milky Way. Furthermore, some structures such as gas planes and strings in the local bubble are probably the result of supernovae. These, due to their low temperatures, can not be observed in the visible and infrared. The only way to do so is to measure the spectra of nearby stars so that the light of stars passing through the local bubble is absorbed by existing gas and the resulting spectral lines from absorption can be measured. In this study, we use binary stars to trace the local bubble structures through lines such as the Na I Doublet. First, we determined the observed spectral lines of stars by HARPS and FEROS echelle spectrographs. Then, we made synthetic spectra with the ATLAS9 code. Finally, the difference between the observational and synthetic spectra confirms the existence of the Na I Doublet in the local ISM.

Streptomyces sp. YS-943균주가 생산하는 아미노산 대사길항물질의 정제와 성상 (Isolation and Properties of Amino Acid Antimetabolite from Streptomyces sp. YS-943)

  • 유성재;박부길
    • 한국미생물·생명공학회지
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    • 제23권1호
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    • pp.81-86
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    • 1995
  • A Streptomyces strain YS-943, which produced amino acid antimetabolite, was isolated from soil. During the course of screening for new amino acid antimetabolites from the culture broth of Actinomycetes, we found that the strain produced a substance active against Gram-positive bacteria and its activity was reversed by L-methionine and L-histidine on the synthetic minimal agar medium in the culture broth.The morphological and cultural characteristics serve to identify the producing organism strain YS-943 as the genus Streptomyces. Fermentation was carried out in the synthetic medium at 28$\CIRC$C for 48 hours. The fermentation yield reached about 12 mg per liter of the broth. The YS-943 substance was obtained as white powder, mp 194$\CIRC$C and has the molecular formular of C$_{4}$H$_{8}$N$_{2}$O$_{4}$. Its structure was determined to be o-carbamyl-D-serine by spectroscopic data. It is active against some Gram-positive bacteria and reversed by L-methionine and L-histidine.

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Statistical Selection of Amino Acids Fortifying a Minimal Defined Medium for a High-level Production of the Kringle Fragments of Human Apolipoprotein(a)

  • Lim, Hyung-Kwon;Kim, Sung-Geun;Jung, Kyung-Hwan;Seo, Jin-Ho
    • Journal of Microbiology and Biotechnology
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    • 제14권1호
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    • pp.90-96
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    • 2004
  • A synthetic defined medium, fortified with amino acids, was developed for the stable production of the kringle fragments of human apolipoprotein(a) (apo(a)), rhLK68. Using a complex rich medium containing yeast extract and a high-cell-density fed-batch culture, the expression level of rhLK68 reached 17% of the total cellular protein, which corresponded to $5\;g\;l^{-1}$ of the culture. To replace the complex media with chemically defined media, several amino acids that positively affect cell growth and gene expression were chosen by a statistical method. The various combinations of the selected amino acids were tested for its fortifying effect on a minimal defined medium. When glutamine only was added, the overall expression level of rhLK68 reached 93% of the complex rich medium increasing the specific expression level by 22.4% and decreasing the cell growth by 24%. Moreover, the addition of glutamine resulted in a 2-fold increase in the concentration of rhLK68 in the culture broth, compared with the minimal defined medium. The synthetic defined media developed in this study could be generally applied to high-cell-density cultures of the recombinant Escherichia coli BL21(DE3), especially for the production of therapeutic proteins that require a strict quality control of the culture media and fermentation processes.

Environmental toxicity and biodegradation of Pseudomonas sp. EL-G527 producing biosurfactant

  • Mi Seon, Cha;Hong Ju, Son;Sang Jun, Lee
    • 한국환경과학회:학술대회논문집
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    • 한국환경과학회 2002년도 봄 학술발표대회 발표논문집
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    • pp.452-454
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    • 2002
  • A biosurfactant-producing microorganism, .Pseudomouos sp. EL-G527 was isolated from activated sludge by enrichment culture when grown on mineral salt medium containing n-hexadecane as a carbon source. The biosurfactant from .Pseudomonar sp. EL-G527 exhibited lesser toxicity to bacterial population than synthetic surfactants and in the biodegradation test, biosurfactant was rapidly degraded and lost its activity as surface active material after 1 day incubation. In this study, the biosurfactant from Pseudomonas sp. EL-G527 was effective surface-active compound, more biodegradable and less toxic to microbial ecosystem than various synthetic surfactants.

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Propionibacterium shermanii에 의한 Vitamin $B_{12}$생성에 영향을 미치는 발효조건에 관한 연구 (Study on the Fermentation Conditions Influencing the Production of Vitamin $B_{12}$ by Propionibacterium shermanii)

  • 김지영;김공환구양모
    • KSBB Journal
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    • 제7권2호
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    • pp.126-131
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    • 1992
  • P. shermanii IFO 1239을 이용 vitamin $B_{12}$를 생산할 때 산소의 영향은 매우 큼 것으로 나타났는데 배양 전반부는 혐기적 조건이, 후반부는 호기적 조건이 vitamin $B_{12}$ 생성증진에 효과적임이 밝혀졌다. 본 연구를 통하여 배양 48시간 동안은 복합배지상에서 혐기적으로 배양하다가 48시간 이후부터는 합성배지로 바꾸고 호기적 조건으로 배양해주는 방법이 vitamin $B_{12}$ 의 생성을 증가시켰다. 이런 배양방법을 이용하여 탄소원과 유기산이 vitamin $B_{12}$ 생성에 미치는 영향을 알아본 결과 glucose, fructose, lactose가 좋은 탄소원이었으며 유기산 중에서는 succinate 와 malate가 각각 34.9%와 18.7%의 vitamin $B_{12}$생성을 촉진시켰다.

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인삼적부병원균의 영양생리학적 연구 (The Nutritional Physiology of Red Rotting of Ginseng cause by Erwinia carotovora)

  • 유병서;이민웅;이지열;최혜정
    • 미생물학회지
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    • 제20권3호
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    • pp.119-124
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    • 1982
  • As a basic study to elucidate nutritional physiology and composition of synthetic medium of red rotting bacteria, Erwinia carotovora, of ginseng, the effects of hydrogen ion concentration, various kinds of carbon sources, nitrogen source, micrometallic salts and it's concentration on the gorwth of the bacteria were investigated and the results were as follows. Optimal pH in the basal medium for the growth of the bacteria was 6.5. After incubation the pH in culture media was neutralized. Among the various kinds of carbon sources, sucrose, glucose mannitol, but organic acids were not utilized effectively as nutrients. After incubation the pH turned acidic. Alanine as organic nitrogen sources nad ammonium sulfate as inorganic nitrogen promoted the growth, but L-valine and sodium nitrite were the least effective. Ferric chloride 1.0mg/dl and ferrous sulfate 100mg/dl were the most effective as micrometallic sources. Control and boric acid were the least effective. New synthetic medium based on the above results was follows ; Alanine 1.0g, $KH_2PO_4\;1.0g, \;sucrose\;30.0g, \;MgSo_4{\cdot}7H_2O\;0.5g, \;FeCl_3{\cdot}6H_2O\;1.0mg\;thiamine\;200{\gamma}g$, and distilled water 1000ml, pH6.5.

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기주식물엽에 있어서 녹병균의 분화 (Rust Fungus Diferentiation on Host Leaves)

  • 김원겸
    • 미생물학회지
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    • 제13권1호
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    • pp.37-44
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    • 1975
  • As a basic study to elucidate nutritional physiology and composition of synthetic medium of red rotting bacteria, Erwinia carotovora, of ginseng, the effects of hydrogen ion concentration, various kinds of carbon sources, nitrogen source, micrometallic salts and it's concentration on the gorwth of the bacteria were investigated and the results were as follows. Optimal pH in the basal medium for the growth of the bacteria was 6.5. After incubation the pH in culture media was neutralized. Among the various kinds of carbon sources, sucrose, glucose mannitol, but organic acids were not utilized effectively as nutrients. After incubation the pH turned acidic. Alanine as organic nitrogen sources nad ammonium sulfate as inorganic nitrogen promoted the growth, but L-valine and sodium nitrite were the least effective. Ferric chloride 1.0mg/dl and ferrous sulfate 100mg/dl were the most effective as micrometallic sources. Control and boric acid were the least effective. New synthetic medium based on the above results was follows ; Alanine 1.0g, $KH_2PO_4$ 1.0g, sucrose 30.0g, $MgSo_4$ $7H_2$O 0.5g, $FeCl_36H_2$O 1.0mg thiamine 200.gamma.g, and distilled water 1000ml, pH6.5.

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A Study on Design Variables for Increasing the Breaking Strength of Synthetic Fiber Chain

  • Kyeongsoo Kim;Seonjin Kim;Hyunwoo Cho;Dokyoun Kim;Yongjun Kang;Taewan Kim
    • 한국해양공학회지
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    • 제37권1호
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    • pp.31-37
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    • 2023
  • In this study, a fiber chain was developed to replace a steel chain using high-modulus polyethylene DM20. The pick count, wrapping count, and inner length were selected as the main design variables of the fiber chain and were analyzed to increase the breaking strength. Orthogonal array experiments were conducted, and the results were analyzed with respect to the breaking strength. The analysis revealed that the pick count and wrapping count had meaningful effects at significance levels within 5%. The main effect analysis revealed that a smaller pick count, larger wrapping count, and longer inner length caused the breaking strength to increase. With the wrapping count fixed at 1, a pick count less than -0.65, and an inner length greater than 0.38, the breaking strength was calculated to be greater than 300 kN. These results are expected be important factors in the derivation of an optimal combination of design variables to attain a fiber chain with a targeted strength.

연작장해지토양(連作障害地土壤)의 식물독소(植物毒素)에 관(關)한 연구(硏究) 제(第)3보(報) Siderophore 생성(生成) Pseudomonas 속(屬) 세균접종(細菌接種) 및 양(陽) ion 첨가(添加)가 토양부생균(土壤腐生菌)의 생육(生育)에 미치는 영향(影響) (Studies on Phytotoxin in Intensively Cultivated Upland Soil III. The Abilities of Siderophore Formation, Competition and Absorption of Fe3+ and Mn2+ with Inoculation of the Fluorescence Forming Soil Bacteria and Soil Saprophytic Fungi)

  • 이상규;서장선
    • 한국토양비료학회지
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    • 제21권1호
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    • pp.41-47
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    • 1988
  • 토양중(土壤中) 향광색소생성세균(螢光色素生成細菌)에서 형성(形成)되는 3가철등(價鐵等)의 양(陽) ion 결합물질(結合物質)인 Siderophore 생성(生成)이 토양부생성사상균(土壤腐生成絲狀菌)의 생육(生育) 및 $Fe^{3+}$$Mn^{2+}$의 흡수이용(吸收利用)에 관(關)한 영향(影響)을 밝히고저 실내실험(室內實驗)한 결과(結果)는 다음과 같다. 1. 형광색소생성(螢光色素生成) 토양세균(土壤細菌)인 Pseudomonas putida Pt-II의 인공배지(人工培地)에 접종(接種)은 Siderophore 생성(生成)을 증가(增加)시켰다. 2. 경시적(徑時的) Siderophore 생성량(生成量)은 3가철(價鐵)의 첨가(添加)로 감소(減少)되었으며 철결합물질(鐵結合物質)인 EDDHA와 유사(類似)한 작용(作用)을 보였다. 3. Siderophore 농도(濃度)의 증가(增加)는 토양부생성(土壤腐生性) 사상균(絲狀菌)의 생육(生育)을 억제(抑制)하였으며 억제(抑制)의 정도(程度)는 독소생성(毒素生成) 사상균(絲狀菌)인 Stachybotrys chatarum과 F. solani에서 강(强)하였으나 F. oxysporum에 대해서는 억제력(抑制力)이 약(弱)하였다. 4. 인공배지내(人工培地內)에서 $Mn^{2+}$의 농도변화(濃度變化)는 Siderophore 생성(生成)에 영향(影響)하지 못하였으나 토양부생성사상균(土壤腐生性絲狀菌)의 생체중(生體重) 증가(增加)와는 정상관관계(正相關關係)를 보였음.

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