• Title/Summary/Keyword: Synthetic Environments

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Rewiring carbon catabolite repression for microbial cell factory

  • Vinuselvi, Parisutham;Kim, Min-Kyung;Lee, Sung-Kuk;Ghim, Cheol-Min
    • BMB Reports
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    • v.45 no.2
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    • pp.59-70
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    • 2012
  • Carbon catabolite repression (CCR) is a key regulatory system found in most microorganisms that ensures preferential utilization of energy-efficient carbon sources. CCR helps microorganisms obtain a proper balance between their metabolic capacity and the maximum sugar uptake capability. It also constrains the deregulated utilization of a preferred cognate substrate, enabling microorganisms to survive and dominate in natural environments. On the other side of the same coin lies the tenacious bottleneck in microbial production of bioproducts that employs a combination of carbon sources in varied proportion, such as lignocellulose-derived sugar mixtures. Preferential sugar uptake combined with the transcriptional and/or enzymatic exclusion of less preferred sugars turns out one of the major barriers in increasing the yield and productivity of fermentation process. Accumulation of the unused substrate also complicates the downstream processes used to extract the desired product. To overcome this difficulty and to develop tailor-made strains for specific metabolic engineering goals, quantitative and systemic understanding of the molecular interaction map behind CCR is a prerequisite. Here we comparatively review the universal and strain-specific features of CCR circuitry and discuss the recent efforts in developing synthetic cell factories devoid of CCR particularly for lignocellulose-based biorefinery.

Enhanced Bone-Regenerative Performance of Porous Hybrid Scaffolds by Surface Immobilization of Nano-Hydroxyapatite

  • Lee, Sang-Cheon
    • Proceedings of the Materials Research Society of Korea Conference
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    • 2009.11a
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    • pp.12.1-12.1
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    • 2009
  • Nano-hydroxyapatite (N-HAp)has shown the pivotal role in producing bone-regenerative materials since it has similarity to natural bone minerals in terms of size, morphology, and the composition. Currently, the combination of biopolymers and N-HAp is recognizedas an attractive approach in generating hybrid scaffolds for bone tissueengineering. Surface engineering is an important issue since it determines whether cells can effectively adhere and proliferate on porous scaffolds. We aim to develop a synthetic approach to porous 3D scaffolds by immobilizing N-HAp on pore surfaces. The discrete nano-level anchoring of N-HAp on the scaffold pore surface is achieved using surface-repellent stable colloidal N-HAp with surface phosphate functionality. This rational surface engineering enables surface-anchored N-HAp to express its overall intrinsic bioactivity,since N-HAp is not phase-mixed with the polymers. The porous polymer scaffolds with surface-immobilized N-HAp provide more favorable environments thanconventional bulk phase-mixed polymer/N-HAp scaffolds in terms of cellular interaction and growth. In vitro biological evaluation using alkalinephosphatase activity assay supports that immobilized N-HAp on pore surfaces of polymer scaffolds contributed to the more enhanced in vitro osteogenicpotential. Besides, the scaffolds with surface-exposed N-HAp provide favorable environments for enhanced in vivo bone tissue growth, estimated by characteristic biomarkers of bone formation such as collagen. The results suggest that newly developed hybrid scaffolds with surface-immobilized N-HApmay serve as a useful 3D substrate with pore surfaces featuring excellent bonetissue-regenerative properties. Acknowledgement. This research was supported by a grant (code #: 2009K000430) from 'Center for Nanostructured Materials Technology' under '21st Century Frontier R&D Programs' of the Ministry of Education, Science and Technology, Korea.

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Hierarchical IoT Edge Resource Allocation and Management Techniques based on Synthetic Neural Networks in Distributed AIoT Environments (분산 AIoT 환경에서 합성곱신경망 기반 계층적 IoT Edge 자원 할당 및 관리 기법)

  • Yoon-Su Jeong
    • Advanced Industrial SCIence
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    • v.2 no.3
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    • pp.8-14
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    • 2023
  • The majority of IoT devices already employ AIoT, however there are still numerous issues that need to be resolved before AI applications can be deployed. In order to more effectively distribute IoT edge resources, this paper propose a machine learning-based approach to managing IoT edge resources. The suggested method constantly improves the allocation of IoT resources by identifying IoT edge resource trends using machine learning. IoT resources that have been optimized make use of machine learning convolution to reliably sustain IoT edge resources that are always changing. By storing each machine learning-based IoT edge resource as a hash value alongside the resource of the previous pattern, the suggested approach effectively verifies the resource as an attack pattern in a distributed AIoT context. Experimental results evaluate energy efficiency in three different test scenarios to verify the integrity of IoT Edge resources to see if they work well in complex environments with heterogeneous computational hardware.

Estimation of soil moisture based on sentinel-1 SAR data: focusing on cropland and grassland area (Sentienl-1 SAR 토양수분 산정 연구: 농지와 초지지역을 중심으로)

  • Cho, Seongkeun;Jeong, Jaehwan;Lee, Seulchan;Choi, Minha
    • Journal of Korea Water Resources Association
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    • v.53 no.11
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    • pp.973-983
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    • 2020
  • Recently, SAR (Synthetic Aperture Radar) is being highlighted as a solution to the coarse spatial resolution of remote sensing data in water resources research field. Spatial resolution up to 10 m of SAR backscattering coefficient has facilitated more elaborate analyses of the spatial distribution of soil moisture, compared to existing satellite-based coarse resolution (>10 km) soil moisture data. It is essential, however, to multilaterally analyze how various hydrological and environmental factors affect the backscattering coefficient, to utilize the data. In this study, soil moisture estimated by WCM (Water Cloud Model) and linear regression is compared with in-situ soil moisture data at 5 soil moisture observatories in the Korean peninsula. WCM shows suitable estimates for observing instant changes in soil moisture. However, it needs to be adjusted in terms of errors. Soil moisture estimated from linear regression shows a stable error range, but it cannot capture instant changes. The result also shows that the effect of soil moisture on backscattering coefficients differs greatly by land cover, distribution of vegetation, and water content of vegetation, hence that there're still limitations to apply preexisting models directly. Therefore, it is crucial to analyze variable effects from different environments and establish suitable soil moisture model, to apply SAR to water resources fields in Korea.

A Human Mobility Model in Shipyards

  • Duong, Dat Van Anh;Yoon, Seokhoon
    • International Journal of Internet, Broadcasting and Communication
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    • v.12 no.4
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    • pp.93-101
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    • 2020
  • Shipyards are potential environments for using IoT services, sensor networks, and delay tolerant networks. Simulations of those services and networks strongly rely on human mobility models. Results obtained with an unrealistic model may not reflect the true performance of applications, protocols, and algorithms in a shipyard. A lot of synthetic models for human movements have been studied but most of them are generic and focus on the daily movements of humans on city scales. Nevertheless, workers in shipyards have unique movement characteristics such as movement speed, pause time, and attractions places. For instance, workers usually move to some places, where they work, and rarely move to other places in the factory. Movement characteristics of workers not only depend on workers but also on tasks, which they do. For instance, workers, who paint ships, have similar movement speed and pause time. Hence, in this paper, human movements in shipyards are studied. We propose a new human mobility model called the human mobility mode in shipyards (MIS). In MIS, workers are classified into multiple types. Movement characteristics of a worker are similar to other workers in the same type. Based on the visiting probability, workers have some places, where they frequently visits, and some places, where they rarely visit. We analyze real mobility traces and studie to achieve human movement characteristics from real traces. The results show that MIS provides a well-match to the movement characteristic from real traces.

The Performance Evaluation on Unique Business of Public Enterprise using the DEA Model (DEA를 이용한 공기업 고유사업의 성과평가)

  • Lee, Sang-Chul;Suh, Yeung-Ho;Park, Sang-Chan;Moon, Jae-Young
    • Journal of Korean Society for Quality Management
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    • v.37 no.3
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    • pp.65-73
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    • 2009
  • This research analyzes results and efficiency to promote a government enterprise of A Korean public enterprise to use DEA. Especially, we were used analysis efficiency which are one is year-on-year, another is integrated, and the other is vertical analysis. As a results of integrated analysis show that Gyeonggi_2003 Gyeonggi_2004, Gangwon_2004, Chungcheon-Bukdo_2003, Chungcheon-Bukdo_2004, Cholla-Namdo_2005, and Kyongsang-Bukdo_2003 need to improve upon. Year-on-year analysis result that Gyeonggi, Gangwon, and Kyongsang-Bukdo need urgent improvement. Today, many advanced countries approach not only agricultural investment but also synthetic investment because they believe that agriculture contains living space including food control. Therefore, when the government make a strategic plan for the land and water development in the field of agriculture, they should prepare it well including the proper measures to cope with the internal and external environments.

Analysis of development methods for a Multidisciplinary Design Optimization framework (다분야 통합 최적설계 프레임워크 구축방법 분석)

  • Lee, Ho-Jun;Lee, Jae-Woo;Moon, Chang-Joo;Kim, Sang-Ho;Lee, Jeong-Oog
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.36 no.10
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    • pp.947-953
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    • 2008
  • MDO(Multidisciplinary Design and Optimization) framework can be an integrated environment or a system, which is for synthetic and simultaneous analysis and design optimization in various design fields of aerospace systems. MDO framework has to efficiently use and integrate distributed resources such as various analysis codes, optimization codes, CAD tools, DBMS and etc. in heterogeneous environment, and to provide graphical and easy-to-use user interfaces. Also, its development method can be changed by design objects and development environment. In this paper, we classify MDO frameworks into three types according to the development environments: Single PC-based, PLinda-based and Web Services-based MDO framework. And, we compare and analyze these frameworks.

Web Services-based Multidisciplinary Design Optimization System (웹 서비스 기반 MDO 시스템)

  • Lee, Ho-Jun;Lee, Jae-Woo;Lee, Jeong-Oog
    • Journal of the Korean Society for Aeronautical & Space Sciences
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    • v.35 no.12
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    • pp.1121-1128
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    • 2007
  • MDO(Multidisciplinary Design and Optimization) can be applied for design of complex systems such as aircraft and SLV(Space Launch Vehicle). MDO System can be an integrated environment or a system, which is for synthetic and instantaneous analysis and design optimization in various design fields. MDO System has to efficiently use and integrate distributed resources such as various analysis codes, optimization codes, CAD, DBMS, GUI, and etc. in heterogeneous environments. In this paper, we present Web Services-based MDO System that integrates resources for MDO using Globus Toolkit and provides organic autonomous execution using automation technique such as Workflow system and agent. And also, it provides collaborative design environment through web user interfaces.

Algorithm to Estimate Oil Spill Area Using Digital Properties of Image

  • Jang, Hye-Jin;Nam, Jong-Ho
    • Journal of Ocean Engineering and Technology
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    • v.34 no.1
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    • pp.46-54
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    • 2020
  • Oil spill accidents at sea result in a wide range of damages, including the destruction of ocean environments and ecosystems, as well as human illnesses by the generation of harmful gases caused by phase changes in crude oil. When an oil spill occurs, an immediate initial action should be performed to minimize the potential damage. Existing studies have attempted to identify crude oil spillage by calculating the crude oil spill range using synthetic aperture radar (SAR) satellite images. However, SAR cannot capture rapidly evolving events because of its low acquisition frequency. Herein, an algorithm for estimating an oil spill area from an image obtained using a digital camera is proposed. Noise that may occur in the image when it is captured is first eliminated by preprocessing, and then the image is analyzed. After analyzing the characteristics of the digital image, a strategy to binarize an image using the color, saturation, or lightness contained in it is adopted. It is found that the oil spill area can be readily estimated from a digital image, allowing for a faster analysis than any conventional method. The usefulness of the oil spill area measurement was confirmed by applying the developed algorithm to various oil spill images.

Structural Changes of the Spinach Photosystem II Reaction Center After Inactivation by Heat Treatment

  • Jang, Won-Cheoul;Tae, Gun-Sik
    • BMB Reports
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    • v.29 no.1
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    • pp.58-62
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    • 1996
  • The structural changes in the electron donor side of the PSII reaction center have been monitored since heat treatment ($45^{\circ}C$ for 5 min) of thylakoids is known to decrease the oxygen evolving activity. In heat-treated spinach chloroplast thylakoids, the inhibitory effect of 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU) on the electron transport activity of the PSII reaction center from diphenyl carbazide to dichlorophenolindophenol became reduced approximately 3.8 times and [$^{14}C$]-labeled DCMU binding on the D1 polypeptide decreased to 25~30% that of intact thylakoid membranes, implying that the conformational changes of the DCMU binding pocket, residing on the D1 polypeptide, occur by heat treatment. The accessibility of trypsin to the $NH_2$-terminus of the cytochrome b-559 ${\alpha}$-subunit, assayed with Western blot using an antibody generated against the synthetic peptide (Arg-68 to Arg-80) of the COOH-terminal domain, was also increased, indicating that heat-treatment caused changes in the structural environments near the stromal side of the cytochrome b-559 ${\alpha}$-subunit, allowing trypsin more easily to cleave the $NH_2$-terminal domain. Therefore, the structural changes in the electron donor side of the PSII reaction center complexes could be one of the reasons why the oxygen evolving activity of the heat-treated thylakoid membranes decreased.

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