• 제목/요약/키워드: Streptomyces species

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감자 더뎅이병 이병괴경으로부터 분리한 Streptomyces sp. P3 균주의 유전체 해독 (Draft genome sequence of Streptomyces sp. P3 isolated from potato scab diseased tubers)

  • 강민규;박덕환
    • 미생물학회지
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    • 제54권2호
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    • pp.158-160
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    • 2018
  • Streptomyces sp. P3 균주는 대한민국 강원도 평창의 더뎅이병 이병괴경으로부터 2017년 분리되었다. 이 논문에서는 9,851,971 bp (71.2% G + C 함량)로 구성된 P3 균주의 전체염기서열을 보고한다. 지놈은 8,548개의 코딩서열, 18개의 rRNA 그리고 66개의 tRNA 유전자를 포함하고 있다. 특히 P3 균주는 감자표면과 무종자를 이용한 병원성 검정에서 병원성을 나타내지는 않았지만, 감자 더뎅이병 유발 Streptomyces들이 보유한 병원성 유전자 중 tomA 유전자만이 존재하였다. 따라서 본 논문에 제공되는 전체염기서열은 감자 더뎅이병원세균들의 병원성 획득을 위한 진화단계에서의 이해를 높이기 위한 중요한 단서가 될 것이다.

The Structural Characterization of the Putative DNA-Binding Protein BldB from Streptomyces Lividans

  • Ochiriin, Tsogbadrakh-Mishig;Kang, Sa-Ouk
    • 한국생물물리학회:학술대회논문집
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    • 한국생물물리학회 2002년도 제9회 학술 발표회 프로그램과 논문초록
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    • pp.49-49
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    • 2002
  • Mutants blocked at the earliest stages of morphological development in Streptomyces species are called bld mutants. We have cloned bldB gene ORF from Slividans. Genomic Southern blot analysis for main strains S.lividans, S.seoulensis, S.coelicolor A3(2), and S.griseus indicated that bldB gene is conserved in all main Streptomyces strains.(omitted)

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인삼 뿌리썩음 병균, Fusarium solani에 길항적인 Streptomyces species의 동정 (Identification of Streptomyces species antagonistic to Fusarium solani causing Ginseng root rot)

  • 정영윤;정후섭;오승환
    • 미생물학회지
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    • 제20권2호
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    • pp.73-79
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    • 1982
  • Among 131 isolates of Strptomyces obtained from ginseng cultivating soil, the two isolates ST59 and ST129 showing high antagonistic activity to Fusarium solani(Mart.) Appel & We. causing ginseng root rot were identified. The two isolates were identified Streptomyces alboniger Porter, et al. and Strptomyces reseolilacinus Pridham, et al., respectively, based on mrophology, cultural, and physiological characteristics on various culture media. Spore chains of ST59 and ST129 were flexuous(RF) and coiled(S). Spore surfaces of two isolates were all smooth. Aerial mass color of ST59 was white series and ST129 red series.

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Report of 21 unrecorded bacterial species in Korea belonging to the phylum Actinobacteria, discovered during the survey in 2020

  • Ham, You Ju;Jeong, Ji Won;Im, Wan-Taek;Kim, Won-Yong;Yoon, Jeong-Hun;Kim, Myung Kyum;Seong, Chi Nam;Kim, Seung Bum
    • Journal of Species Research
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    • 제11권1호
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    • pp.1-9
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    • 2022
  • The phylum Actinobacteria includes many groups of aerobic, Gram-stain-positive, rod, or filamentous shaped bacteria. Actinobacteria are known for multicellular differentiation in some groups, and also for production of various secondary metabolites such as antibiotics. During a series of extensive surveys of indigenous prokaryotic species diversity in Korea, bacterial strains belonging to Actinobacteria were isolated from various sources of terrestrial environments. A total of 21 bacterial strains, belonging to 10 genera in 8 families, were isolated as unrecorded species in Korea. Among them, 11 were assigned to the family Streptomycetaceae, two species assigned to each of the families Microbacteriaceae, Mycobacteriaceae and Nocardioidaceae, and one species assigned to each of the families Euzebyaceae, Corynebacteriaceae, Micrococcaceae and Intrasporangiaceae. At the genus level, Streptomyces (10 species) was the most abundant, followed by Microbacterium and Mycolicibacterium(2 species each), and one species in each of the genera Corynebacterium, Euzebya, Arthrobacter, Terracoccus, Kribbella, Nocardioides and Yinghuangia. The detailed descriptions of each unrecorded species are provided.

Nucleotide Sequence of 16S rRNA Gene from Streptomyces melanosporofaciens 7489

  • LEE, DONG-SUN;SUNG-OUI SUH;SEON-KAP HWANG;TAEG-KYU KWON;TAE-HO KIM;WOO-CHANG SHIN;SOON-DUCK HONG
    • Journal of Microbiology and Biotechnology
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    • 제6권5호
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    • pp.364-365
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    • 1996
  • A region encoding the 16S rRNA was cloned by PCR from Streptomyces melanosporofaciens 7489 and sequenced by the chain-termination dideoxy sequencing method. A phylogenetic tree constructed by sequence alignment of 24 Streptomyces species suggests that there is little evolutionary distance between this strain and Streptomyces rimosus.

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Selection and Identification of a Strain KT-10 Producing the Cathepsin B Inhibitor

  • Han, Kil-Hwan;Do, Jae-Ho;Kim, Sang-Dal
    • Journal of Microbiology and Biotechnology
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    • 제7권5호
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    • pp.333-340
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    • 1997
  • An actinomycetes, KT-10 isolated from ginseng field in Kyongpook, Korea was selected based on its ability to produce a lysosomal cathepsin B inhibitor. The inhibitor purified from the culture supernatant of the isolate KT-10 showed strong inhibitory effects against cathepsin B as well as against papain when the activities were measured using synthetic substrate, ${\alpha}$-N-benzyloxycarbonyl-L-Iysine p-nitrophenyl ester (CLN) or ${\alpha}$-N-benzoyl-D,L-arginine 2-naphthylamide (BANA). The isolate KT-10 was identified as a species of Streptomyces based on its morphological characteristics and chemotaxonomic data. The TAXON program of Ward was used to identify Streptomyces sp. KT-10 as a strain of Streptomyces luteogriseus belong to cluster 18 of the genus Streptomyces with a Willcox probability 0.999388. The cathepsin B inhibitor was presumed to a novel material composed of a polyhydroxylamine.

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Pyricularia oryzae의 성장을 억제하는 물질을 생산하는 Streptomyces sp. NA-52의 분리 및 동정

  • 윤원호;임대석;이명섭;김창한
    • 한국미생물·생명공학회지
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    • 제25권6호
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    • pp.537-545
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    • 1997
  • The aim of the present research program was to isolate a strain of actinomycetes producing antifungal substance. Soil samples were collected from various sites in Korea and a number of actinomycetes were isolated from the soil samples by applying selective agar for actinomycetes. Among isolates, a strain (NA -52) producing antifungal substance against Pyricularia oryzae was selected. Chemotaxonomic and numerical identification were carried out for the isolate. Fifty taxonomic unit characters were tested and the data were analyzed numerically using TAXON program. The isolate was identified as a synonym of streptomyces diastaticus belong to cluster No. 19 (Streptomyces diastaticus). But it showed a low similarity to S. diastaticus in simple matching coefficients, hence it was considered as one new species in Streptomyces.

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알파-아밀라제 저해제 생성 Streptomyces DMCJ-49의 동정과 저해제의 분리 (Identification of Streptomyces DMCJ-49 Producing the alpha-Amylase Inhibitors and the Isolation of the Inhibitor)

  • 정동직;곽진환;최응칠;김병각
    • 약학회지
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    • 제33권3호
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    • pp.175-182
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    • 1989
  • To find ${\alpha}-amylase$ inhibitors produced by microorganisms from soil, a strain which had a strong inhibitory activity against bacterial ${\alpha}-amylase$ was isolated from the soil sample collected in Korea. The morphological and physiological characteristics of this strain on several media and its utilization of carbon sources showed that it was one of Streptomyces species according to the International Streptomyces Project method. The amylase inhibitor of this strain was purified by active carbon adsorption, silicagel column chromatography, SP-Sephadex C-25 column chromatography, adsorption on Amberlite XAD-2. The inhibitor was oligosaccharide which was composed of glucose. The inhibitor had inhibitory activity against other amylase such as salivary ${\alpha}-amylase$, pancreatic ${\alpha}-amylase$, fungal ${\alpha}-amylase$ and gluco-amylase.

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Microbe-Based Plant Defense with a Novel Conprimycin Producing Streptomyces Species

  • Kwak, Youn-Sig
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2015년도 춘계학술대회 및 임시총회
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    • pp.54-54
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    • 2015
  • Crops lack genetic resistance to most necrotrophic soil-borne pathogens and parasitic nematodes that are ubiquitous in agroecosystems worldwide. To overcome this disadvantage, plants recruit and nurture specific group of antagonistic microorganisms from the soil microbiome to defend their roots against pathogens and other pests. The best example of this microbe-based defense of roots is observed in disease-suppressive soils in which the suppressiveness is induced by continuously growing crops that are susceptible to a pathogen. Suppressive soils occur globally yet the microbial basis of most is still poorly described. Fusarium wilt, caused by Fusarium oxysporum f. sp. fragariae is a major disease of strawberry and is naturally suppressed in Korean fields that have undergone continuous strawberry monoculture. Here we show that members of the genus Streptomyces are the specific bacterial components of the microbiome responsible for the suppressiveness that controls Fusarium wilt of strawberry. Furthermore, genome sequencing revealed that Streptomyces griseus, which produces a novel thiopetide antibiotic, is the principal species involved in the suppressiveness. Finally, chemical-genetic studies demonstrated that S. griseus antagonizes F. oxysporum by interfering with fungal cell wall synthesis. An attack by F. oxysporum initiates a defensive "cry for help" by strawberry root and the mustering of microbial defenses led by Streptomyces. These results provide a model for future studies to elucidate the basis of microbially-based defense systems and soil suppressiveness from the field to the molecular level.

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Heterologous Expression of Hybrid Type II Polyketide Synthase System in Streptomyces Species

  • Kim, Chang-Young;Park, Hyun-Joo;Kim, Eung-Soo
    • Journal of Microbiology and Biotechnology
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    • 제13권5호
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    • pp.819-822
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    • 2003
  • Polyketides are an extensive class of secondary metabolites with diverse molecular structures and biological activities. A plasmid-based minimal polyketide synthase (PKS) expression cassette was constructed using a subset of actinorhodin (act) biosynthetic genes (actI-orfl, actI-orf2, actI-orf3, actIII, actⅦ, and actIV) from Streptomyces coelicolor, which specify the construction of an orange-fluorescent anthraquinone product aloesaponarin II, a type II polyketide compound derived from one acetyl coenzyme A and 7 malonyl coenzyme A extender units. This system was designed as an indicator pathway in S. parvulus to generate a hybrid type II polyketide compound via gene-specific replacement. The act ${\beta}-ketoacyl$ synthase unit (actI-orfl and actI-orf2) in the expression cassette was specifically replaced with oxytetracycline ${\beta}-ketoacyl$ synthase otcY-orfl and otcY-orf2). This plasmid-based hybrid PKS cassette generated a novel orange-fluorescent compound structurally different from aloesaponarin II in both S. lividans and S. parvulus. In addition, several additional distinctive blue-fluorescent compounds were detected, when this hybrid PKS cassette was expressed in S. coelicolor B78 (actI-orf2 mutant), implying that the expression of plasmid-based hybrid PKS cassette in Streptomyces species should be an efficient way of generating hybrid type II polyketide compounds.