• 제목/요약/키워드: Streptomyces scabies

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리그닌의 분해가 우수한 Streptomyces halstedii ssp. scabies SA1-27과 Streptomyces violaceusinger C1-6에서 생성되는 효소들에 관한 연구 (The Study of Enzymes Produced by Streptomyces halstedii ssp. scabies SA1-27 and Streptomyces violaceusinger C1-6 Which Have Good Lignolytic Activity)

  • 김태전
    • 대한임상검사과학회지
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    • 제38권2호
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    • pp.87-93
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    • 2006
  • This study was done to know a kind and change (transition) of enzymes produceed by Streptomyces halstedii ssp. scabies SA1-27 and Streptomyces violaceusinger C1-6 which showed good lignolytic activity and a good decolorization ratio of remazol brilliant blue R(RBBR) dye. These strains were isolated from soil and identified by the author. The basal medium containg 0.2% glucose was used to measure enzyme activity, Lignin peroxidase 1 (Lip 1) was measured by the methods of Choi, and Bourbonnais and Paice. Lignin peroxidase 2 (Lip 2) was measured by the methods of Ishida et al and Ramachandra et al using 2.4-dichlorophenol(2.4 DCP), manganese peroxidase(Mnp), veratryl alcohol oxidase (VAO), and laccase. They were measured by each of the methods of Choi and Paszczynski et al, and Bourbonnais and Paice, and De Jong et al. In the results, the kind of enzymes produced by Streptomyces halstedii ssp. scabies SA1-27 were Lip 1, Lip 2, VAO, and laccase, and their activities indicated the highest value as each 4.95 nmol/mg protein, $8.45({\times}100^{-3})unit$, 10.25 nmol/mg protein, 9.20 nmol/mg protein on the sixth day of the culture and decreased gradually over time. The kind of enzymes produced by Streptomyces violaceusinger C1-6 were Lip 1, Lip 2, Mnp, VAO, and laccase, and their activities indicated the highest value as each 4.90 nmol/mg protein, $13.85({\times}100^{-3})unit$, 3.10 nmol/mg protein, 11.30 nmol/mg protein, 4.45 nmol/mg protein on the sixth day of the culture and decreased gradually over time. Consequently, the author knew the fact that there were few differences in the kind and quantity of enzymes produced by the two Streptomyces strains, but all enzyme activities indicated the highest value on the sixth day of the culture and decreased gradually over time.

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Rapid Identification of Potato Scab Causing Streptomyces spp. Using Pathogenicity Specific Primers

  • Shin, Pyung-Gyun;Kim, Jeom-Soon;Hahm, Young-Il
    • The Plant Pathology Journal
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    • 제18권6호
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    • pp.338-341
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    • 2002
  • The potato scab is caused by several species of Streptomyces. Among these species, only pathogenic strains were found to produce thaxtomin A characterized by necrotic bioassay and HPLC. In this study, identification of the pathogenic strains of Streptomyces was performed through the polymerase chain reaction (PCR) by using specific pathogenicity primer sets derived from the nec1 gene sequences of Streptomyces scabies. The expected PCR products were obtained approximately 580 bp and confirmed by sequencing. This PCR technique can be used effectively to identify the pathogenic Streptomyces species, that cause scab on potato tubers.

Lignin을 분해하는 Streptomyces strainsdop 의한 페놀화합물의 분해 (The Degradation of Phenolic Compounds by Lignolytic Streptomyces strains)

  • 김태전
    • 한국환경보건학회지
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    • 제26권3호
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    • pp.86-91
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    • 2000
  • The purpose of this was to investigate the degradation efficiency of phenol compounds(catechol, ferulic acid, protocatechuic acid, syringic acid, vanillic acid) by Streptomyces halstedii scabies SAI-36, Streptomyces avendulas SA2-14, and Strptomyces badius(ATCC 39117, control group). The results were as follows: Catechol showed the degradation efficiency that is lower than 50% in three strains. Ferulic acid and vanillic acid showed high degradation efficiency of 98.8% and 94.5% respectively by Streptomyces lavendulas SA2-14. protocatechuic acid and syringicacid showed high degradation efficiency of 89.6% and 77.9%. The degradation efficiency of catechol by Streptomyces halstedii scabies SAI-36, Streptomyces lavendulas SA2-14 and Streptomyces badius(ATCC 39117) was low as 49.2%, 40.2% and 20.2% respectively. But the degradation of other phenolic compoumds except catechol by Streptomyces laven-dulas SA2-36 and Streptomyces badius(ATCC 39117). The results demonstrated that two experimental strains are superior ability to control group in degradation of phenol compounds and Streptomyces lavendulas SA2-14 was superior of two experimental strain. This results were consistent with previous research results that Streptomyces lavendulas SA2-14 was the best strain in degradation ability for lignin, decoloration abilities for variousdyes, and various enzyme production abilities. Therefore, it is suggested that lignin can be used as a indicator when selecting Actinomycetes for degradation of non-degradable materials such as phenol compounds.

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제주지역 감자더뎅이병 발생 특성 (Development Characteristics of Potato Common Scab in Jeju Inland)

  • 홍순영;강영길;함영일
    • 식물병연구
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    • 제9권3호
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    • pp.137-144
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    • 2003
  • 제주지역 감자재배포장에서 문제가 되고 있는 더뎅이 병의 방제대책 마련을 위해 1995년부터 1999년까지 더뎅이병의 발생 특성에 관한 연구를 실시한 결과 감자재배 기간이 오랠수록 더뎅이병 이병율은 증가하였고, 토양 pH가 높아질수록 발병이 증가하는 경향이었으며, 감자 연작포장의 더뎅이병 발생율이 54.8% 인데 비해, 감자 재배 전 보리 혹은 배추를 재배하거나 휴경을 한 포장에서는 더뎅이병 발생율이 20.8~26.3%로 비교적 낮았다. 분리한 균주에서 Stteptomyces scabies, S. turgidiscabies, S. acidiscabies가 동정되었으며, 이들 균의 분리 비율은 각각 37.7%, 14.8%, 18.0%였다. 더뎅이병원균의 균사생육 최적온도는 $28~30^{\circ}C$ 였으며, 최적 pH는 6~7이었다.

Rapid Identification of Potato Scab Causing Streptomyces spp. from Soil Using Pathogenicity Specific Primers

  • Kim, Jeom-Soon;Lee, Young-Gyu;Ryu, Kyoung-Yul;Kim, Jong-Tae;Cheon, Jeong-Uk
    • 한국식물병리학회:학술대회논문집
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    • 한국식물병리학회 2003년도 정기총회 및 추계학술발표회
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    • pp.134.2-135
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    • 2003
  • The plant-pathogenic species S. scabies, S. acidiscabies, and S. turgidiscabies cause the scab disease of potato and produce the phytotoxins, thaxtomins. necl, a gene conferring a necrogenic phenotype, is involved in pathogenicity and physically linked to the thaxtomin A biosynthetic genes. Identification of the pathogenic strains of Streptomyces from soil was performed through the polymerase chain reaction by using specific pathogenicity primer sets derived from the necl gene sequences of Streptomyces smbies. The DNA was extracted from soil using a bead-beating machine and modifications of the FastPrep system. The DNA was suitable for direct use in the PCR. The PCR products showed the bands of approximately 460 bp. This methods can be very usuful in identifying species responsible for scab diseases and studying on the ecology of plant-pathogenic Streptomyces spp.

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Characterization of Potato Scab Pathogens (Streptomyces Species) in Korea

  • Park, Duck-Hwan;Shrestha, Rosemary;Hur, Jang-Hyun;Lim, Chun-Keun
    • 한국미생물학회:학술대회논문집
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    • 한국미생물학회 2005년도 International Meeting of the Microbiological Society of Korea
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    • pp.162-165
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    • 2005
  • Potato scab, an important disease that affects developing tubers, causes a major problem in potato cultivation. The major potato cultivation areas in Korea are located in two Northern provinces, Gangwon and Gyeonggi, and two Southern provinces, Jeju island, and South Jeolla. In these areas, potato scab is widely distributed and has caused severe problem in potato cultivation. Therefore, potato-growing areas were surveyed for identification and distribution of potato scab pathogens from 1996 to 1999. Pathogenic Streptomyces strains were isolated from potato scab lesions and six representative Streptomyces species were characterized based on their phenotypic and molecular characteristics including, pathogenicity, physiological and morphological properties, analyses of 16SrRNA genes and 16S-23S ITS region, DNA relatedness, production of thaxtomin A, and the presence of nec1 and ORFtnp gene homologs. Three species were identified as previously described Streptomyces scabies, S. turgidiscabies, and S. acidiscabies, while other three species having distinct phenotypics properties were identified as novel S. luridiscabiei, S. puniciscabiei, and S. niveiscabiei.

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Streptomyces lividans Tk24에서 secY homolog의 클로닝과 분석 (Molecular Cloning and Characterization of the secY Homolog from Streptomyces lividans TK24)

  • 김순옥;서주원
    • 한국미생물·생명공학회지
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    • 제26권2호
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    • pp.110-116
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    • 1998
  • 몇 가지 그람양성 세균에서 secY 유전자가 함유된 operon의 구성이 rplO(L15)-secY-adk라는 결과를 토대로 L15와 adk 유전자일부를 primer로 제작하여 Streptomyces lividans TK24에서 secY 유전자가 함유된 1.8kb 단편을 PCR로 증폭하여 얻은 후 secY 유전자를 cloning하였다. 전 단편을 sequencing하여 추론한 아미노산으로 상동성을 조사해 본 결과 Escherichia coli, Bacillus subtilis, Micrococcus luteus, Bacillus licheniformis, Staphylococcus carnosus, Brevibacterium flavum, Streptomyces scabies의 SecY와 각각 46%, 43%, 57%, 44%, 42%, 56%, 90%의 유사성을 보이는 것으로 나타났으며 SecY의 소수성 profile 또한 서로 유사하고 10개의 membrane spanning segment를 동일하게 가지는 것으로 나타났다. 유전자 구조도 다른 그람양성균에서와 같이 L15-SecY-Adk순 이였으며 secY 유전자의 종결코돈과 adk 유전자의 개시코돈이 한 염기를 공유하는 상태의 translational coupling 구조를 하고 있었다. 이와 같이 단백질분비에 관여하는 유전자와 ribosome 구성요소, 그리고 ATP 합성에 관여하는 요소는 세포성장에 상호 연관 작용이 있는 것으로 사료된다.

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국내감자 연작지대에서 분리한 더뎅이병원균의 특성 (Characteristics of Potato Common Scab Pathogens from Continuous Cropping Fields in Korea)

  • 김주희;이왕휴
    • 한국식물병리학회지
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    • 제12권1호
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    • pp.109-115
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    • 1996
  • 국내 감자 연작 재배지에서 수집하여 분리동정한 더뎅이병원균인 Streptomyces scabies의 배양적, 형태적, 생리적 특성을 조사한 결과는 다음과 같다. 이병감자에서 분리된 균들은 병원성 균주와 비병원성 균주들로 구분되었고, 이들 간에는 뚜렷한 차이를 보였는데, 전형적인 병징을 나타내는 병원성균주는 비병원성균주와는 달리, 나선형의 포자사슬, 회색 포자, 멜라닌 색소를 생성하고 D-glucose, L-arabinose, D-fructose, D0mannitol, raffinose, rhamnose, sucrose, i-inositol, D-xylose 등의 탄소원을 이용하였으며, 또한 7% NaCl 및 streptomycin sulfate, crystal violet, olean domycin(10$\mu\textrm{g}$/ml, 100$\mu\textrm{g}$/ml)등의 항생물질에 감수성을 나타내었다.

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