• 제목/요약/키워드: Specific mRNA

검색결과 858건 처리시간 0.028초

Promoter Methylation and Relative mRNA Expression of the p16 Gene in Cervical Cancer in North Indians

  • Gupta, Amita;Ahmad, Mohammad Kaleem;Mahndi, Abbas Ali;Singh, Renu;Pradeep, Yashodhara
    • Asian Pacific Journal of Cancer Prevention
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    • 제17권8호
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    • pp.4149-4154
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    • 2016
  • Background: Cervical carcinoma is one of the main causes of mortality in women worldwide as well as in India. It occurs as a result of various molecular events that develop from the combined influences of an individual's genetic predisposition and external agents such as smoking and menstrual hygiene, for example. However, infection with human papillomavirus (HPV) is the established major risk factor. The aim of the current study was to investigate p16 CpG island methylation and establish any correlation with mRNA expression in north Indian population. Materials and Methods: We analyzed 196 woman volunteer out of which 98 were cases and 98 healthy controls. For the analysis of methylation pattern, DNA extracted from blood samples was modified with a bisulfate kit and used as template for methylation specific PCR (MSP). Quantitative real-time PCR (QRT-PCR) was performed to check mRNA expression. Results: Correlation between methylation status of p16 gene and poor menstrual hygiene was significant (p=0.006), high parity cases showed methylation of p16 gene (p=0.031) with increased risk up to 1.86 times for cervical cancer and smoking was a strong risk factor associated with cervical cancer. We analyzed methylation pattern and found 60.3% methylation in cases with low mRNA expression level (0.014) as compare to controls (1.24). It was also observed that promoter methylation of p16 gene was significantly greater in FIGO stage III. Conclusions: We conclude that p16 methylation plays an important role in cervical cancer in the north Indian population and its methylation decreases mRNA expression. It can be used as an important and consistent blood biomarker in cervical cancer patients.

Clinical Outcomes of Downregulation of E-cadherin Gene Expression in Non-small Cell Lung Cancer

  • Zheng, Shi-Ying;Hou, Jing-Yu;Zhao, Jun;Jiang, Dong;Ge, Jin-Feng;Chen, Sheng
    • Asian Pacific Journal of Cancer Prevention
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    • 제13권4호
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    • pp.1557-1561
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    • 2012
  • Objective: To investigate the promoter methylation status of the E-cadherin gene in non-small cell lung cancer (NSCLC) and its association with clinical pathological parameters, and to explore the relationship between downregulation of E-cadherin gene expression and the methylation status of its promoter region. Methods: Nested methylation-specific PCR was performed to examine CpG methylation within the 5' CpG island of the E-cadherin gene in lung cancer and para-cancerous tissue from 37 patients with primary non-small cell lung cancer. Quantitative real-time PCR was performed to measure the level of E-cadherin mRNA. Results: Of thirty-seven cases, 12 (32.4%) samples showed aberrant CpG methylation in tumor tissues compared with the corresponding normal tissues. In addition, a reduction in E-cadherin mRNA levels was observed in 11 of the 12 (91.7%) tumor tissues carrying a methylated E-cadherin gene. However, only 10 (43.5%) cases displayed reduced mRNA levels in tumor tissues from the remaining 23 cases (excluding 2 samples from which mRNA was unavailable) without methylation events. Downregulation of E-cadherin gene expression significantly correlated with the promoter methylation status of this gene. Conclusion: These results provide strong evidence that the methylation status of E-cadherin gene contributes to a reduction in the expression of E-cadherin mRNA, and may play a role in the development and progression of NSCLC.

K562 백혈구암 세포의 Phorbol 12-Myristate 13-Acetate에 의한 대핵세포로의 분화과정에서 Heat Shock Proteins와 Glucose-Regulated Proteins의 발현 (Expression of the Heat Shock Proteins and Glucose-Regulated Proteins during Phorbol 12-Myristate 13-Acetate-Induced Megakaryocytic Differentiation of K562 Erythroleukemia Cells)

  • 이창훈;김우진;김종묵;한송이;김정락;한규형;임운기;유미애;강호성
    • 한국동물학회지
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    • 제39권1호
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    • pp.47-53
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    • 1996
  • K562 백혈구암 세포의 phorbol 12-myristate 13-acetate(PMA)에 의한 대핵세포로의 분화과정에서 heat shock proteins(HSPs)와 glucose-regulated proteins(GRPs)의 발현을 조사하였다. PMA에 의한 K562 세포의 분화 특징은 세포성장의 억제, 형태학적 변화, gpllIa의 발현 증가, c-myc 발현의 감소 등으로 나타난다. PMA에 의한 대핵세포 분화과정에서, HSP90A, HSP90B 그리고 HSP28 mRNA와 단백질 합성은 현저히 감소하는 반면, GRP78/BiP와 GRP94의 mRNA 합성은 증가하였다. 한편 HSP7OA와 HSP7OB의 mRNA 합성은 감소하였지만, HSP70 단백질의 합성은 변함이 없었다. 이러한 결과는 HSPs와 GRPs가 K562 세포의 증식 또는 대핵세포 분화 과정에서 특이한 역할을 할 것임을 시사하고 있다.

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Ultrasound Targeted Microbubble Destruction for Novel Dual Targeting of HSP72 and HSC70 in Prostate Cancer

  • Wang, Hang-Hui;Song, Yi-Xin;Bai, Min;Jin, Li-Fang;Gu, Ji-Ying;Su, Yi-Jin;Liu, Long;Jia, Chao;Du, Lian-Fang
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권3호
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    • pp.1285-1290
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    • 2014
  • The aim was to determine whether ultrasound targeted microbubble destruction (UTMD) promotes dual targeting of HSP72 and HSC70 for therapy of castration-resistant prostate cancer (CRPC), to improve the specific and efficient delivery of siRNA, to induce tumor cell specific apoptosis, and to find new therapeutic targets specific of CRPC.VCaP cells were transfected with siRNA oligonucleotides. HSP70, HSP90 and cleaved caspase-3 expression were determined by real-time quantitative polymerase chain reaction and Western blotting. Apoptosis and transfection efficiency were assessed by flow cytometry. Cell viability assays were used to evaluate safety. We found HSP72, HSC70 and HSP90 expression to be absent or weak in normal prostate epithelial cells (RWPE-1), but uniformly strong in prostate cancerous cells (VCaP). UTMD combined with dual targeting of HSP72 and HSC70 siRNA improve the efficiency of transfection, cell uptake of siRNA, downregulation of HSP70 and HSP90 expression in VCaP cells at the mRNA and protein level, and induction of extensive tumor-specific apoptosis. Cell counting kit-8 assays showed decreased cellular viability in the HSP72/HSC70-siRNA silenced group. These results suggest that the combination of UTMD with dual targeting HSP70 therapy for PCa may be most efficacious, providng a novel, reliable, non-invasive, safe targeted approach to improve the specific and efficient delivery of siRNA, and achieve maximal effects.

비정상적 정자형성 환자의 정소에서 Heat Shock Protein A2 (hspA2) mRNA 발현의 감소 (Repression of HspA2 mRNA Expression in Human Testes with Abnormal Spermatogenesis)

  • 손원영;황서하;한징택;이재호;김석중;김영찬
    • Clinical and Experimental Reproductive Medicine
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    • 제26권1호
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    • pp.103-109
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    • 1999
  • Objective: Heat shock protein 70-2 (Hsp70-2) gene knockout mice are found to have premeiotic arrest at the primary spermatocyte stage with a complete absence of spermatids and spermatozoa. This observation led to the hypothesis that hspA2 may be disrupted in human testes with abnormal spermatogenesis. To test this hypothesis, we studied the mRNA expression of hspA2 in infertile men with azoospermia. Design: The mRNA expression were analyzed by competitive RT-PCR among testes with normal spermatogenesis, pachytene spermatocyte arrest, and sertoli-cell only syndrome. Materials and methods: Testicular biopsy was performed in men with azoospermia (n=15). Specimens were subdivided into three groups: (group 1) normal spermatogenesis (n=5), (group 2) spermatocyte arrest (n=5), (group 3) Sertoli-cell only syndrome (n=5). Total RNA was extracted by Trizol reagent. Total extracted RNA was reverse transcribed into cDNA and amplified by PCR using specific primers for hspA2 target cDNAs. A competitive cDNA fragment was constructed by deleting a defined fragment from the target cDNA sequence, and then coamplified with the target cDNA for competitive PCR. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene was used as an internal control. Results: On Competitive RT-PCR analyses for hspA2 mRNA, significant amount of hspA2 expression was observed in group 1, whereas a constitutively low level of hspA2 was expressed in groups 2 and 3. Conclusion(s): The study demonstrates that the hspA2 gene expression is down-regulated in human testes with abnormal spermatogenesis, which in turn suggests that hspA2 gene may play a specific role during meiosis in human testes.

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인체 기도상피세포주에서 Theophylline에 의한 Eotaxin mRNA 발현억제 (The Effect of Theophylline on Eotaxin mRNA Expression in Pulmonary Epithelial Cell Line A549)

  • 한민수;유지홍;강홍모
    • Tuberculosis and Respiratory Diseases
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    • 제48권6호
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    • pp.898-908
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    • 2000
  • 연구배경 : 기도의 알레르기성 질환에서는 기도점막에 발생하는 염증 특히 호산구의 집결 및 침윤의 역할이 중요하다. Eotaxin은 CC chemokine으로서 호산구에만 선택적으로 작용하여 조직으로의 호산구의 집결을 유도한다. Theophylline의 항염증작용은 기관지천식 치료에 중요한 기전의 하나로 생각되며 특히 호산구성 기도염증에 관여하는 여러 인자들을 조절하는 작용이 중요하다. 본 연구는 theophylline의 향염증작용이 eotaxin mRNA의 발현 억제를 통해 이루어지는지 알아보고자 하였다. 방법 : A549 세포를 배양하여 IL-$\beta$ 또는 TNF-$\alpha$로 자극한 후 Northern blot analysis를 시행하여 eotaxin mRNA의 발현율 관찰하였다. 그 후에 theophylline을 가하여 발현을 관찰하였다. 결과 : A549 세포에서 cytokine으로 유도된 eotaxin mRNA의 발현은 TNF-$\alpha$ 자극 후 $\beta$-actin과 비교한 발현율은 0.1, 1, 10 ng/mL의 농도에서 각각 7%, 22%, 28% 였고 IL-$\beta$ 자극 후 0.01, 0.1, 1, 10 ng/mL의 농도에서 각각 10%, 42%, 63%. 72%로서 cytokine의 농도가 증가할수록 eotaxin mRNA의 발현이 증가하였다. Dexamethasone투여 후 eotaxin mRNA의 발현율은 TNF-$\alpha$로 자극한 경우 0, 0.001, 0.01 ${\mu}M$의 dexamethasone농도에서 각각 27%, 18%, 8% 였고 IL-$\beta$로 자극한 경우 0, 0.001, 0.01, 0.1 ${\mu}M$의 농도에서 각각 43%, 47%, 12%, 8%로서 dexamethasone의 농도가 증가함에 따라 발현이 감소되었다. Theophylline 투여 후 IL-$\beta$로 자극한 경우 eotaxin mRNA의 발현율은 0, 0. 001, 0.01, 0.1, 1, 10 mM의 theophylline농도에서 각각 48%, 40%, 33%, 22%, 16%, 14% 로서 theophylline의 농도가 증가함에 따라 발현이 감소되었다. 결론 : Theophylline의 항호산구성 염증작용은 eotaxin mRNA의 발현을 억제함으로써 이루어짐을 알 수 있었다.

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DAZL binds to the transcripts of several Tssk genes in germ cells

  • Zeng, Mei;Deng, Wenqian;Wang, Xinying;Qiu, Weimin;Liu, Yanyan;Sun, Huaqin;Tao, Dachang;Zhang, Sizhong;Ma, Yongxin
    • BMB Reports
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    • 제41권4호
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    • pp.300-304
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    • 2008
  • The Dazl gene encodes a germ-cell-specific RNA-binding protein which is essential for spermatogenesis. It has been proposed that this protein (DAZL) binds to RNA in the cytoplasm of germ cells and controls spermatogenesis. Using the specific nucleic acids associated with proteins (SNAAP) technique, we identified 17 target mRNAs bound by mDAZL. Among these transcripts, we focused on TSSK2, which encodes a testis-specific serine/threonine kinase. To date, five TSSK family members have been cloned, and all are exclusively expressed in the testis. We demonstrated that in addition to the TSSK1 3'UTR, the 3'UTRs of TSSKs 2 and 4 were bound by human and mouse DAZL, and that human DAZL (hDAZL) bound to the 3'UTR of human TSSK5 (hTSSK5). Our results suggest that the Dazl gene may play different roles in human and mouse spermatogenesis by regulating different members of the downstream gene family.

siRNA-mediated Silencing of Survivin Inhibits Proliferation and Enhances Etoposide Chemosensitivity in Acute Myeloid Leukemia Cells

  • Karami, Hadi;Baradaran, Behzad;Esfahani, Ali;Estiar, Mehrdad Asghari;Naghavi-Behzad, Mohammad;Sakhinia, Masoud;Sakhinia, Ebrahim
    • Asian Pacific Journal of Cancer Prevention
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    • 제14권12호
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    • pp.7719-7724
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    • 2013
  • Background: Overexpression of survivin, a known inhibitor of apoptosis, is associated with tumor progression and drug resistance in numerous malignancies, including leukemias. The aim of this study was to investigate the effect of a specific survivin small interference RNA (siRNA) on proliferation and the sensitivity of HL-60 acute myeloid leukemia (AML) cells to the chemotherapeutic drug etoposide. Materials and Methods: The cells were transfected with siRNAs using Lipofectamine $^{TM}2000$ transfection reagent. Relative survivin mRNA and protein levels were measured by quantitative real-time PCR and Western blotting, respectively. Trypan blue exclusion assays were performed to monitor tumor cell proliferation after siRNA transfection. The cytotoxic effects of etoposide and survivin siRNA, alone and in combination, on leukemic cells were determined using MTT assay. Apoptosis was assessed by ELISA cell death assay. Results: Survivin siRNA markedly reduced both mRNA and protein expression levels in a time-dependent manner, leading to distinct inhibition of cell proliferation and increased spontaneous apoptosis. Surprisingly, survivin siRNA synergistically increased the cell toxic effects of etoposide. Moreover, survivin down-regulation significantly enhanced its induction of apoptosis. Conclusions: Our study suggests that down-regulation of survivin by siRNA can trigger apoptosis and overcome drug resistance of leukemia cells. Therefore, survivin siRNA may be an effective adjuvant in AML chemotherapy.

사람 치은섬유세포와 치주인대섬유모세포에서 Periostin과 S100A2-, S100A4-칼슘결합단백 mRNA의 발현 (Expression of Periostin and S100A2 - S100A4 - Calcium Binding Proteins mRNA in Human Gingival Fibroblasts and Periodontal Ligament Fibroblasts)

  • 김병옥;한경윤;최용선;김세훈;박병기;김흥중;박주철
    • Journal of Periodontal and Implant Science
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    • 제31권1호
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    • pp.109-122
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    • 2001
  • Gingival fibroblasts(GF) and periodontal ligament fibroblasts(PDLF) are the major cellular components of periodontal soft connective tissues, but the precise molecular biological differences between these cells are not yet known. In the present study, we investigated the expression of S100A4, S100A2 calcium-binding protein and osteoblast-specific factor 2(OSF-2, Periostin) mRNA in GF and PDLF in vitro through the process of reverse transcription-polymerase chain reaction(RT-PCR) and Northern blot analysis in each. Human GF and PDLF were isolated from the gingival connective tissue and the middle third of freshly extracted healthy third molars. They were cultured in Dulbecco's Modified Eagle Medium(DMEM) containing 10% fetal bovine serum and cells in the third passage were used in the experiments. After extracting total RNA from cultured cells, RT-PCR and Northern analysis were performed using S100A4-, S100A2- and Periostin-specific oligonucleotide primers and subcloned cDNA probes in each. In PT-PCR and Northern analysis, the expression of S100A4 and Periostin mRNA in GF was slightly detectable. Interestingly, the expression of S100A4 and periostin mRNA in PDLF was much higher than that in GF. On the other hand, S100A2 mPNA was highly expressed in both GF and PDLF. Since there was a marked difference of S100A4 and Periostin expression between GF and PDLF in vitro, these data suggest that S100A4 and periostin could be used as a useful marker for distinguishing cultured gingival fibroblasts and periodontal ligament cells.

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생쥐 난소의 발생단계에 따른 Growth Differentiation Factor-9의 유전자 발현 (Expression of Growth Differentiation Factor-9 in the Mouse Ovaries at Different Developmental Stages)

  • 윤세진;이경아;고정재;차광열
    • 한국발생생물학회지:발생과생식
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    • 제3권1호
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    • pp.95-100
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    • 1999
  • Growth/differentiation factor-9 (GDF-9)은 transforming growth factor $\beta$ (TGF-$\beta$) superfamily의 member로서 난소의 난자에서만 특이적으로 발현되며 정상적인 난포발달에 있어 필수적인 성숙인자로 최근에 알려졌다. 본 연구는 RT-PCR을 통해 생쥐의 원시난포에서의 GDF-9 mRNA의 발현 여부와 함께 난포의 발달단계에 따른 상대적인 발현량을 분석하고자 실시하였다. 본 실험에는 ICR 생쥐를 사용하여 질전 (vaginal plug)이 확인된 날을 1일로 하여 임신 19일의 태아와 태어난 날을 1일로 하여 생후 1일, 10일, 21일, 28일된 생쥐 난소를 실험에 사용하였다. 각 발달단계의 난소조직으로부터 total RNA를 추출하여 GDF-9 유전자 발현 여부를 확인하였으며 이들을 $\beta$-actin에 대해 상대적인 정량분석을 하였다. GDF-9 유전자 발현은 아직은 성장을 시작하지 않은 임신 19일의 태아의 난소, 대부분이 원시난포로 이루어진 태어난 날의 생쥐 난소에서도 확인되었으며, 성장이 왕성하게 진행되고 있는 난포 즉, antrum 형성 이전의 growing follicles이 주를 이루는 생후 10일째의 난소에서 가장 높은 GDF-9 유전자 발현이 관찰되었다. 나머지 단계의 난소에서는 거의 비슷한 정도로 발현함을 관찰할 수 있었다. 본 연구의 결과는 생쥐의 원시난포에도 GDF-9 transcript가 존재한다는 것을 확실하게 증명하였으며, GDF-9이 생쥐의 초기 난포발달에 중요한 역할을 할 것이라는 가능성을 시사한다.

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