• Korean Journal of Soil Science and Fertilizer
• /
• v.46 no.3
• /
• pp.163-172
• /
• 2013

The aquatic insect collected at six areas (each 2 for mountain area, plain field, and urban area) from 2009 to 2011 were classified to analyze the distribution and diversity of species. Frequency (number of aquatic insect: N), number of species (S), similarity index (C), richness index (R1, R2), variety index (V1, V2), evenness index (E1, E2, E3, E4, E5), and dominance index (D1) were investigated. Total N and S were 143 and 84, respectively. C matrix of 153 combinations was constructed with the average of 0.542. The average C of 3 years (0.659) was 9.9% P, more higher than the average C of 6 areas (0.560). The average values of the index of 18 plots were 2.28, 0.17, 1.24, 1.08, 0.07, 0.06, 0.01, 0.87, 0.31, 0.93 for R1, R2, V1, V2, E1, E2, E3, E4, E5, D1, respectively. The order in the coefficient of variation (CV) of the indicator for 18 plots was N (70.0%) > E3 (54.9%) > E1 (49.6%) > R2 (40.5%) > S (35.3%) > R1 (33.7%) > E2 (28.4%) > E5 (15.9%) > V1 (11.1%) > E4 (6.3%) > V2 (5.1%) > D1 (4.8%). The correlation matrix with 66 combinations between the indexes was constructed with statistical significance for 33 combinations. However, R1, V1, E2 and D1 were the proper indexes to represent species diversity of aquatic insect based on the correlation matrix and the theory of statistical independence. The richness index was highest in mountain, variety index in urban area, and evenness index in plain field. However, the dominance index was lowest in urban area.

• The Korean Journal of Ecology
• /
• v.22 no.6
• /
• pp.349-354
• /
• 1999

The spatial distributions of allelic frequencies and ecological traits by randomization were studied in the natural population of two species (Pinus rigida and Pyrola japonica). Both species showed significant positive spatial autocorrelation as measured by Moran's I. In P. rigida, the genetic similarity was shown in individuals within up to a scale of 18 m distance and this is partly due to combination of pollen and seed dispersal by wind or men. In P. japonica, significant spatial autocorrelation was consisted of a scale of 8 m intervals. These population structure in the distribution of allelic frequencies is related to mating systems such as outcrossing and vegetative spread. The results also indicate that positive species associations between P. rigida and P. japonica can occur when both species select the same habitat or require the same environmental conditions.

• Asian Journal of Turfgrass Science
• /
• v.4 no.2
• /
• pp.101-118
• /
• 1990

Effects of Zoysia japonica fired in winter on the arthropoda communities in its grassland and rice field was investigated . The results gave indicated that a significant difference between total 15,120 individuals of 4 classes, 11 orders, 47 families, 92 genera and 103 species in the control of Zoysia japonica grassland, and total 1, 404 individuals of 4 classes, 11 orders, 47 families, 53 genera 65 species in the Zoysia japonica grassland fired in winter. Index of similarity of Zoysia japonica grasslands between Kimpo and Yangsuri areas was 0.51. Dominant species of arthropoda communities in Zysia japonica grasstands in Kimpo and Yangsuri areas were Hypogastnua sp. and Proisotorn sp., respectively. The spiders were 9 families and 27 species at Kimpo, and t2 families. and 44 species at Yangsuri, and their dominant species was Gnathonariurn dentaturn at two areas. Laodelphex striatelus in the Zoysia japonica grassland fired in winter was sampled constantly morning, noon and night, hut Gnatlzonariun dentatum was sampled more frequently in the morning than at night. Damage of the spiders in the Zoysia japonica granssland fired in winter was more severe than that of Laodelphcx striatelus .

• Journal of Species Research
• /
• v.10 no.2
• /
• pp.134-141
• /
• 2021

During a survey of indigenous prokaryotic species diversity of the upstream Nakdong River, South Korea, 12 bacterial strains were isolated for further analysis. These bacterial strains were identified showing at least 98.7% 16S rRNA gene sequence similarity with known bacterial species that were previously unreported in South Korea. The 12 bacterial strains were phylogenetically diverse and assigned to four classes, eight orders, nine families, and ten different genera. The isolates were identified as Leucobacter holotrichiae (99.1%), Leucobacter tardus (99.9%), Rhodococcus rhodochrous (99.9%), Tessaracoccus oleiagri (100%), and Paeniglutamicibacter cryotolerans (99.3%), of the class Actinobacteria; Bacillus coagulans (99.7%) and Bacillus wudalianchiensis (99.1%) of the class Bacilli; Ochrobactrum pseudogrignonense (99.2%) and Paracoccus thiocyanatus (100%) of the class Alphaproteobacteria; and Ideonella azotifigens (99.0%), Polaromonas glacialis(99.3%), and Herbaspirillum seropedicae (99.5%) of the class Betaproteobacteria. The cellular and colonial morphology, biochemical properties, and phylogenetic position of these isolates were examined, and species descriptions are provided.

• Journal of Species Research
• /
• v.8 no.4
• /
• pp.351-364
• /
• 2019

Here we describe indigenous prokaryotic species in Korea, a total of 42 bacterial strains affiliated to the class Alphaproteobacteria isolated from various environmental samples: fermented vinegar, sea water, beach sand, fresh water, salt flats, moss, algae, activated sludge, and soil. From the high 16S rRNA gene sequence similarity (>98.7%) and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to predefined bacterial species. There is no official report that these 42 species included in Alphaproteobacteria in Korea: 15 species of 6 genera in the order Rhodospirillales, 12 species of 10 genera in the order Rhizobiales, 10 species of 8 genera in the order Rhodobacterales, 4 species of 4 genera in the order Sphingomonadales and 1 species of 1 genus in the order Caulobacterales. Gram reaction, colony and cell morphology, basic biochemical characteristics, isolation source, and strain IDs are also described in the species description section.

• Journal of Korean Society for Atmospheric Environment
• /
• v.30 no.6
• /
• pp.531-537
• /
• 2014

Terrestrial vegetation has been known as a main source of biogenic volatile organic compounds (BVOCs). Isoprene and monoterpene among the BVOCs are most abundant species emitted by forests, and have a significant impact on atmospheric chemistry. Abundancy of these species could lead to an increase or decrease in the production of natural tropospheric ozone in forests, depending on the nitric oxide (NO) concentration. Soil is the most significant source of natural NO. Understanding of NO emission from forest soil could be critical in evaluation of air quality in the forest area. Flux-gradient similarity theory (FGST) was applied for practical use to estimate forest soil NO emission at Mt. Taewha where is available micro-meteorological data near surface monitoring from flux tower. NO fluxes calculated by FGST were compared to flux results by flow-through dynamic chamber (FDC) measurement. Surface NO emission trends were shown between two different techniques, however their magnitudes were found to be different. NO emissions measured from FDC technique were relatively higher than those from theoretical results. Daily mean NO emissions resulted from FGST during Aug. 13, 14 and 15 were $0.28{\pm}8.45$, $2.17{\pm}15.55$, and $-3.18{\pm}13.65{\mu}gm^{-2}hr^{-1}$, respectively, while results from FDC were $2.26{\pm}1.44$, $5.11{\pm}3.85$, and $2.23{\pm}6.45{\mu}gm^{-2}hr^{-1}$. Trends of daily means were shown in similar pattern, which NO emissions were increasing during late afternoon ($r^2$=0.04). These emission trends could be because soil temperature and moisture influence importantly soil microbiology.

• Journal of Mushroom
• /
• v.10 no.1
• /
• pp.37-43
• /
• 2012

This study was carried to identify a correct species and asses genetic diversity within the same species of Polyporus spp. preserved in Division of applied Microbiology. Contaminated isolates showed different growth rates, morphology and color of hyphae. We have reconstructed the phylogenetic tree of a select group of Polyporus spp. using nucleotide sequences of the internal transcribed spacer region(ITS) region. The phylogenetic tree was constructed by using the neighbor-joining method. PELF primers of 20-mer were used to assess genetic diversity of preserved isolates. Sequence analysis showed that three strains were different species and four strains were identified completely different nomenclature. According to the analysis of ITS sequences, the genus Polyporus clustered into five distinct group, most of which correlated with species-groups identified by RAPD method. Four isolates included strain PM02 showed high similarity with P. arcularius, four isolates included strain PM03 high similarity with P. alveolaris, three isolates included strain PM01 high similarity with P. tuberaster, and PM 06 and PM04 high similarity with P. brumalis and P. squamossus. Isolates were collected in the United States(PM10, PM11) was identified as P. alveolarius and P. arcularius. RAPD analysis of genetic polymorphisms of genus Polyporus showed a very different band patterns. As the result of RAPD and ITS region sequences analysis for preserved isolates, it seems likely that 6 isolates of Polyporus spp. may be need to reclassify or eliminate from preserved catalogue.

• Korean Journal of Ecology and Environment
• /
• v.54 no.4
• /
• pp.291-302
• /
• 2021

The phytoplankton community in the estuarine system is affected by changes of physicochemical factors easily. The present study analyzed phytoplankton community distribution and similarity, in addition to exploring factors influencing variations in phytoplankton community structure in three lakes located in the Yeongsan River estuary from March 2014 to November 2017. We carried out non-multidimensional scaling (NMDS) and random forest analysis (RF) for comparing the pattern of phytoplankton distribution and the relationship between phytoplankton distribution and environmental variables. Similarity Percentage (SIMPER) and Analysis of Similarity (ANOSIM) were performed to figure out the similarity of phytoplankton community at each site of three lakes. From NMDS, Phytoplankton community distribution differed between Yeongsan and Gumho lakes, and the factors influencing the distribution of phytoplankton communities across the three lakes were water temperature, dissolved oxygen, total nitrogen (T-N), nitrate-N (NO₃-N), and conductivity. NO₃-N was a key factor influencing phytoplankton community structure in the three lakes based on RF. A total of 24 species were identified as indicator species in the three lakes studied, with the highest species numbers observed in Yeongsan Lake (13) and the lowest observed in Yeongam Lake (2). According to SIMPER and ANOSIM results, the phytoplankton community in Yeongsan and Yeongam lakes were similar, and they differed from those in Gumho Lake. In addition, the phytoplankton community structure varied across the study sites in the three lakes, indicating that water channels across the lakes a minor influence phytoplankton community distribution.

• Ecology and Resilient Infrastructure
• /
• v.9 no.4
• /
• pp.269-281
• /
• 2022

The prediction of changes regarding the distribution of vegetation and plant species according to climate changes is important for ecosystem management. In this study, we attempted to develop an assessment method to evaluate the possibility of the potential distribution of warm-temperate woody plant species of East Asia in Korea. To begin with, a list of warm-temperate woody plants distributed in China and Japan, but not in Korea, was prepared, and a database consisting their global distribution and bioclimatic variables was constructed. In addition, the warm-temperate vegetation zone in Korea was delineated using the coldness index and relevant bioclimatic data were collected. After the exclusion of multicollinearity among bioclimatic variables using correlation analysis, mean temperature of the coldest quarter, mean temperature diurnal range, and annual precipitation were selected as the major variables that influence the distribution of warm-temperate plants. A multivariate environment similarity surfaces (MESS) analysis was conducted to calculate the similarity scores between the distribution of these three bioclimatic variables in the global distribution sites of the East Asian warm-temperate woody plants and the Korean warm-temperate vegetation zone. Finally, using stepwise variable-selection regression, the mean temperature of the coldest quarter and annual precipitation were selected as the main bioclimatic variables that affect the MESS similarity index. The mean temperature of the coldest quarter accounted for 88% of the total variance. For a total of 319 East Asian warm-temperate woody plant species, the possibility of their potential distribution in Korea was evaluated by applying the constructed multivariate regression model that calculates the MESS similarity index.

• Korean Journal of Fisheries and Aquatic Sciences
• /
• v.48 no.1
• /
• pp.104-115
• /
• 2015

This study was conducted during April-June in 2008 and 2010, following the Taean Oil Spill. We measured year-to-year changes in benthos species abundances and composition in 16 intertidal zone regions of Chungcheongnam-do. In total, 154 species were found 2008 and 134 in 2010; the mean abundance per area was $403ind./m^2$ and $242ind./m^2$, respectively. In 2008, the 10 dominant species included four species of arthropods, three species of annelids, and three species of mollusks. In 2010, dominant species included five species of annelids, three species of mollusks, one species of arthropods, and one other species. We used bray-curtis similarity to group species and found two groups in 2008 and five in 2010, complementing our NMDS analysis. Finally, we tested correlations between abiotic and biotic factors, and implemented a BIO-ENV analysis, which showed that sediment type, MZ (Phi), and organic content are important environmental factors affecting benthos in the Chung-nam tidal flats.