• Title/Summary/Keyword: Species diversity indices

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Genetic Diversity in Korean Populations of Glycine soja (Fabaceae)

  • Myong Gi Chung
    • Journal of Plant Biology
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    • v.38 no.1
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    • pp.39-45
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    • 1995
  • Glycine soja Sieb. et Zucc., a predominantly selfing annual, has been served as a reservoir of germplasm for soybean, G. max (L.) Merr., cultivar improvement. This study describes the levels and distribution of genetic variation within and among 22 Korean populations of G. soja using starch gel electrophoresis. The species maintains very similar levels of genetic variability within populations observed in most other annuals. At the population level, the mean percent of polymorphic loci (P) was 32.6%, mean number of allele per locus (A) was 1.32, and mean expected heterozygosity (He) was 0.112. In addition, total genetic diversity (HT) calculated only for polymorphic loci was 0.347. However, significant differences in allele frequencies among populations were found for all loci (P<0.001 in each case) and, on average, about 70% of the total variation in the species is common to all populations. Indirects estimate of the number of migrants per generation (Nm=0.58, calculated from mean GST) indicates that gene flow is low among Korean populations of the species. In addition, analysis of fixation indices revealed a substantial heterozygote deficiency in most populations and at all loci. This indicates that most populations sampled may have been substructed largely due to inbreeding (predominantly selfing) and restricted gene flow, coupled with founder effect and genetic drift. Considering a high genetic divergence among populations, it is recommended that several Korean populations of the species should be preserved, especially such as populations in the eastern and southeastern Korean peninsula with high variation.

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Bamboo Distribution Map for Planning the Development of Tourism Potential in Boon Pring Andeman Area

  • Farah, Devy Atika;Dharmawan, Agus;Novianti, Vivi
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • v.2 no.3
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    • pp.144-152
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    • 2021
  • Sanankerto is one of pilot projects for tourism villages in Indonesia due to its natural tourism potential with a 24-ha bamboo forest located in Boon Pring Andeman area. However, the distribution of existing bamboo has never been identified or mapped. Thus, the mana gement is facing difficulty in planning and developing tourism potential as well as spatial management in the area. Therefore, the objectives of this study were to identify and analyze the structure of bamboo vegetation in the Boon Pring Tourism village an d to perform vegetation mapping. The type of research was descriptive exploratory with a cluster sampling technique (i.e., a two-stage cluster) covering an area of ± 10 ha. Bamboo vegetation analysis was performed by calculating diversity index (H'), evenness index (E), and Species Richness index (R). Data were collected through observation and interviews with local people and the manager to determine zonation division. Mapping of bamboo vegetation based on zoning was processed into thematic maps using ArcG is 10.3. Micro climatic factors were measured with three replications for each sub -cluster. Data were analyzed descriptively and quantitatively. Nine species of bamboo identified. Diversity, evenness, and species richness indices differed at each location. Activities of local communities, tourists, and manager determined the presence, number, and distribution of bamboo species. These bamboo distribution maps in three zoning (utilization, buffer, and core) can be used by manager for planning and developing natural tourism potential.

Integrated Analysis of Major Surveys on Biota in Gyeonggi Province and its Implications (경기도 내 분포·서식 생물종에 대한 주요 조사의 통합적 분석 및 함의)

  • Park, Eun-Jin;Lee, Eng Kyoung;Hyun, Jin-Oh;Park, Miseon
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.17 no.2
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    • pp.93-108
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    • 2014
  • The inventory list of wildlife species inhabiting or distributing in Gyeonggi Province was made by compiling species data from precedent surveys, 10 national level nature surveys, 1 survey that Gyeonggi-do conducted, and 46 local surveys presented in scientific journals. Total 2,913 wildlife species including 2,041 vascular plants, 39 mammals, 304 birds, 34 herptiles, 145 fish, and 350 benthic macro-invertebrates were listed in the inventory. It explains 47% of nationwide total species in vascular plants, 31.5% in mammals, 58.2% in birds, 65.4% in herptiles, 12.2% in fish. The total number of important species including endangered species, national monuments, national red lists, etc. was 628 species, accounting for 21.6% of all listed species in Gyeonggi Province. More than 90% of endangered bird species, almost half of endangered fish and herptile species were found in Gyeonggi Province. In particular, abundant bird diversity and inhabitation of many endangered bird species were identified in Gyeonggi Province. Species diversity was greater in the northern area adjacent to the Demilitarized Zone and the eastern forest area. The distribution of the important species such as national endangered species was more distinct in these areas, especially in Gapyeong and Yeoncheon Counties. The inventory list compiled in this study implicates the level of management for biological resources and can provide information for policy decisions regarding new survey sites, protection management of specific species and areas, management practices by spatial characteristics. It should be more compiled and updated with survey data to be utilized as basic indices for local biodiversity strategies and management of biological resources.

Characteristics of Vegetation Structure in Chamaecyparis Obtusa Stands (편백림의 식생구조 특성 분석)

  • Park, Seok-Gon;Kang, Hyun-Mi
    • Korean Journal of Environment and Ecology
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    • v.29 no.6
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    • pp.907-916
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    • 2015
  • The purpose of this study was to identify characteristics of vegetation structure, vegetation succession, and species diversity of artificially planted Chamaecyparis obtusa (CO) stands. The study was carried out by performing vegetation survey for eight CO stands located in Jeollanam-do Province, Korea. Analysis on vegetation classification and ordinations of the stands was conducted using the data from the vegetation survey, and as a result, the stands were classified into five types of communities. Community I showed a considerably lower index of species diversity when compared to other communities because the canopy of the dominant CO was so highly dense that the low-height vegetation was not able to develop or the low-height vegetation almost disappeared due to elimination of weed trees. Meanwhile, the Community II - IV had relatively higher indices of species diversity because various native tree species mixed with the low-height vegetation and competed with each other in the understory and shrub layers to some degree of stability or in their early stage of vegetation development. Community V, lastly, showed higher use intensity as a recreational forest, thus developing simpler vegetation structure on account of artificial intervention. There was positive correlation between photosynthetically active radiation entering the forest floor, number of observed species and index of species diversity. Such characteristics of vegetation structure in CO stands are closely associated with forest management and prescription for planting reforestation, thinning, and brush cutting in the past. There was a slight difference in vegetation structure and species diversity by communities, based on rotation time of the vegetational succession, process of disturbance frequency and disturbance, development, and maturity by planting CO stands. However, when compared to natural forests, the CO stands showed simpler vegetation structure. Because artificial forests are vulnerable in ecosystem service with lower species diversity, a drive for ecological management is needed for such forests to change into healthy ecosystems that can display functions of public benefit.

Diversity and Antifungal Activity of Endophytic Fungi Associated with Camellia oleifera

  • Yu, Jinxiu;Wu, Ying;He, Zhen;Li, Mi;Zhu, Kaiming;Gao, Bida
    • Mycobiology
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    • v.46 no.2
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    • pp.85-91
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    • 2018
  • Endophytic fungi strains (n = 81) were isolated from the leaves, barks, and fruits of Camellia oleifera from Hunan province (China) to delineate their species composition and potential as biological control agents of C. oleifera anthracnose. The fungi were identified by morphological and phylogenetic analyses. Fungal colonization rates of the leaves, barks, and fruits were 58.02, 27.16, and 14.81%, respectively. The isolates were identified as 14 genera, belonging to two subdivisions, Deuteromycotina and Ascomycotina; 87.65% of all isolates belonged to Deuteromycotina. The dominant species, occurring with a high relative frequency, were Pestalotiopsis sp. (14.81%), Penicillium sp. (14.81%), and Fusarium sp. (12.35%). The Simpson's and Shannon's diversity indices revealed the highest species diversity in the leaves, followed by the barks and fruits. The similarity index for the leaves versus barks comparison was the highest, indicating that the number of endophytic fungal species shared by the leaves and barks was higher than barks and fruits or leaves and fruits. Based on the results of dual culture experiments, only five strains exhibited antifungal activity against C. oleifera anthracnose pathogen, with isolate ty-64 (Oidium sp.) generating the broadest inhibition zones. Our results indicate that the endophytes associated with C. oleifera could be employed as natural agents controlling C. oleifera anthracnose.

Seasonal Variation in Community Structure of Subtidal Seaweeds in Jeju Island, Korea (제주도 주변 해역 조하대 해조류 군집구조의 계절적 변동)

  • Kim, Bo Yeon;Ko, Jun-Cheol;Ko, Hyuck Joon;Park, Sung Eun;Cha, Hyung Kee;Choi, Han Gil
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.46 no.5
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    • pp.607-618
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    • 2013
  • Marine macroalgal community structures and characteristics of ocean environmental factors were examined seasonally at four sites in Jeju Island, Korea, from March to November 2012. A total of 71 macroalgal species were identified, including 9 green, 7 brown, and 55 red algae. Peyssonnelia capensis occurred at all study sites and in all seasons. The average annual biomass of seaweed was 991.84 g wet $wt/m^2$, with seasonal variations from 543.80 g in autumn to 1,284.17 $g/m^2$ in summer. A green alga, Codium coactum, was the dominant species, occupying 21.31% (211.39 $g/m^2$) of the total algal biomass in Jeju Island. Subdominant species were Ecklonia cava and Lithophyllum okamurae, comprising 20.85% (206.75 $g/m^2$) and 19.64% (194.75 $g/m^2$), respectively, of the total algal biomass in Jeju Island. The vertical distribution of subtidal seaweeds was represented by L. okamurae at 5 m depth, C. coactum at 10 m depth, E. cava at 5-10 m depth and P. capensis at the 20 m depth level. In the present study, crustose coralline algae, which predominated on barren ground, were subdominant species at all study sites. Community indices varied between 0.51-0.63 for dominance index (DI), 5.53-8.14 for richness index (R), 0.51-0.63 for evenness index (J'), and 2.04-2.32 for diversity index (H'). On the basis of seaweed biomass and community indices, Sinchang was the best preserved coastal area, showing maximal values in biomass, and evenness- and diversity-indices, and minimal value in the dominance index, representing stable environmental conditions. In contrast, the Onpyung and Topyeong sites, located near tourist venues such as Udo and Seogwipo were relatively poor habitats based on community indices and biomass. The present results could imply that climate changes alter seaweed community structure, and long-term monitoring of the study sites is required.

Soil Nematode Fauna in Dokdo Island of Korea (독도의 토양 선충상)

  • Kim, Dong-Geun;Park, Byung-Yong;Ryu, Young-Hyun
    • Research in Plant Disease
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    • v.18 no.4
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    • pp.381-386
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    • 2012
  • Nematode fauna in Dokdo island was investigated for two years between 2008 and 2009. Population density and biomass were $239,500m^2$ (26,000-836,000) and $103.9mg/m^2$ (3.0-388.6), respectively. Total of 31 species of nematodes were identified : Acrobeloides is the most important genus with prominence value (PV) of 117.8, followed by Rhabditidae (PV = 81.9), Prismatolaimus (PV = 39.0), and Aphelenchoides (PV = 31.4). Among feeding group, bacteriovorus nematode composed 77% of density and 62% of biomass followed by plant-parasitic and fungivorus nematodes. A species of Pratylenchus having distinctive tail terminus is under study as a new species. Biological indices, Shannon and Wiener index (2.46), Simpson's diversity index (0.86), Species evenness (0.73), Species richness (1.30) indicate that nematode fauna in Dokdo island is diverse and unique. This study may give a general idea of nematode fauna at the Dokdo island.

Coexistence of plant species under harsh environmental conditions: an evaluation of niche differentiation and stochasticity along salt marsh creeks

  • Kim, Daehyun;Ohr, Sewon
    • Journal of Ecology and Environment
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    • v.44 no.3
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    • pp.162-177
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    • 2020
  • Background: Ecologists have achieved much progress in the study of mechanisms that maintain species coexistence and diversity. In this paper, we reviewed a wide range of past research related to these topics, focusing on five theoretical bodies: (1) coexistence by niche differentiation, (2) coexistence without niche differentiation, (3) coexistence along environmental stress gradients, (4) coexistence under non-equilibrium versus equilibrium conditions, and (5) modern perspectives. Results: From the review, we identified that there are few models that can be generally and confidently applicable to different ecological systems. This problem arises mainly because most theories have not been substantiated by enough empirical research based on field data to test various coexistence hypotheses at different spatial scales. We also found that little is still known about the mechanisms of species coexistence under harsh environmental conditions. This is because most previous models treat disturbance as a key factor shaping community structure, but they do not explicitly deal with stressful systems with non-lethal conditions. We evaluated the mainstream ideas of niche differentiation and stochasticity for the coexistence of plant species across salt marsh creeks in southwestern Denmark. The results showed that diversity indices, such as Shannon-Wiener diversity, richness, and evenness, decreased with increasing surface elevation and increased with increasing niche overlap and niche breadth. The two niche parameters linearly decreased with increasing elevation. These findings imply a substantial influence of an equalizing mechanism that reduces differences in relative fitness among species in the highly stressful environments of the marsh. We propose that species evenness increases under very harsh conditions if the associated stress is not lethal. Finally, we present a conceptual model of patterns related to the level of environmental stress and niche characteristics along a microhabitat gradient (i.e., surface elevation). Conclusions: The ecology of stressful systems with non-lethal conditions will be increasingly important as ongoing global-scale climate change extends the period of chronic stresses that are not necessarily fatal to inhabiting plants. We recommend that more ecologists continue this line of research.

Diversity and Abundance of Ground-beetles (Coleoptera) in Mt. Gabjangsan, Korea (보행성 딱정벌레류의 다양성 및 풍부도에 관한 연구 -경북 상주시 갑장산-)

  • Park Jong Kyun;Yeon Hwa Soon;Trac Dam Huu
    • The Korean Journal of Soil Zoology
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    • v.8 no.1_2
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    • pp.32-36
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    • 2003
  • Diversity and altitudinal distribution of the ground-beetles including Silphidae were investigated on Mt. Gabjangsan, Sangju city, Korea. Of the collected 10 species belonging to 3 families, Synuchus cycloderus was the most abundant species and S. nitidus was the relatively more abundant than the other species. The highest number collected was at alto 700 m. Simpson dominance index was 0.66 the highest at 700 malt., whereas, 0.47 at alto 800 m, was the lowest. The highest Simpson diversity index was noticed at alto 800 m (0.53). Also, seasonal indices of diversity and dominance of Simpson and Menhinick index were provided.

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Avifauna on the Areas Round the Atomic Power Plant (原子力 發電所 周邊의 鳥類相)

  • Kwon, Ki-Chung
    • The Korean Journal of Ecology
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    • v.14 no.4
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    • pp.469-479
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    • 1991
  • The abundance and local distribution of birds around the three atomic power plants were studied during summer in 1998 and winter 1989. It was particularly pointed out how to determine species diversity indices, rarefaction model appeared and habitat use. During the study over 2,200 birds were censused; black-tailed gull, terek sandpipper, asian wandering tattler and australian curlew accountedfor over 76% of the observed birds in summer. Black-tailed gull, black-headed gull, mallard, ancient murrelet and tree sparrow accounted for 76% of the observed birds in winter. overall, 53 species were occurred ; 23 have been observed on yonggwang-gun, 16 used on ulchin-gun, 12 used on kyungju-gun in summer. 18 on yonggwang-gun,,14 on ulchin-gun,12 on kyungju-gun in winter respectively. These three habitats in terms of their of species richness were computed as follows; yonggwang-gun has the highest richness with an expected species number of 17.5 as the same as two season. Kyungju-gun has the lowest with an expected species number of 8.2 in summer and 11.5 in winter.

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