• Title/Summary/Keyword: Species affinity

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Vascular plant diversity of the Gogunsan Archipelago in the Korean Peninsula

  • Kim, Jung-Hyun;An, Ji-Hong;Nam, Gi-Heum;Park, Hwan-Joon;Kim, Jin-Seok;Lee, Byoung Yoon;Lee, Kyeong-Ui;Chang, Yeon-Soon
    • Journal of Species Research
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    • v.8 no.1
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    • pp.136-159
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    • 2019
  • This study was carried out to investigate the flora of six islands belonging to the Gogunsan Archipelago (i.e., Sinsi-do, Seonyu-do, Munyeo-do, Yami-do, Bian-do, and Duri-do) in the Korean Peninsula. As results of five field surveys from March to October of 2016, we have identified 575 total taxa, representing 527 species, five subspecies, 42 varieties, and one hybrid, placed in 358 genera and 118 families. Of these 575 taxa, four are endemic to Korea, six taxa are listed on the Korean Red List of threatened species, 67 are floristic regional indicator plants, and 74 are invasive alien species. In this study, we compared species richness among the islands, and find that the larger the islands, the higher the species richness. In the case of habitat affinity types, forest species were most common, followed by farmland, seacoast, bare ground and wetland species. From similarity analyses based on the composition of vascular plants, each island did not exhibit either local specificity or unique diversity. On the contrary, the proportion of invasive alien and ruderal species may increase by human activities. Investigations and analyses of island flora such as this are important to assess the current status of the flora, predict future vegetation patterns and the spread of the alien species, and establish managment plans of plant diversity.

Characterization of the Organic Matrix Protein in the Freshwater Pelecypod Shells (담수산 이매패류 패각내 유기각질 단백질 특성)

  • 박성빈;조동현
    • The Korean Journal of Malacology
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    • v.3 no.1
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    • pp.3-14
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    • 1987
  • The electrophoretic and innunological cnalyses of organic matrices in the shells of freshwater bivalves were made in order to dlucidate the biochemical characteristics and species-specific differinces of the applied shells, The water-soluble and insoluble matrices of four species of freshwater bivalves, Andodonta fukudai, Unio douglasiae, Lanceolaria and Chrbicula fluminea, were used as analytical materials, There was non-identity in immuno affinity between anti soluble matrix(anti-Sm) and anti insoluble matrix(anti-ISM)sera against the organic matrix of Andodnta fukudai. The SMs of four species (S. fukudai, U.douglasiae, L. acrorhyncha, and C. fluminea) showed the differences in the precipitate arcs at the level of family, though ISMs did mot show differences. In the electrophoretic analysis, all foru species had two SDS-electrophoretic bands of SM, of which molecular wights appeared to be lower than 55,000, shereas the native organic matrices of foru speceis had higher molecular weighrs than those from SDS-dldctrophoresis. Only calcium ion among many ions in extrapallial fluid(EPF) caused SM to change into insoluble molecules, thus the EPF pretreated with Ca++did not form the precipitate arc when did the immuno diffusion whth anti SM serum. ISM precursor may be polymerized into macromolecules like periostracin, a precusor of periostracum, judging from the similat polymerization patterns in 0.1M Tris formate buffer(pH 3); they may be made insoluble macromolecules due to their strong natrue of hydrophobicity.

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Pharmacognostic Evaluation of the Roots of Berberis chitria Lindl.

  • Srivastava, Sharad Kumar;Rawat, Ajay Kumar Singh;Srivastava, Manjoosha;Mehrotra, Shanta
    • Natural Product Sciences
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    • v.12 no.1
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    • pp.19-23
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    • 2006
  • Berberis chitria (family Berberidaceae) has a close affinity with B. aristata, used in traditional systems of medicine as a drug 'Daruharidra' for skin disease, jaundice, affection of eyes, and rheumatism. Keeping this in view, in the present study attempts have been made to identify marker characters of B. chitria in order to differentiate the two species. Some of the diagnostic features of the root are patches of pericyclic fibre, pitted sclerieds and berberine containing cells and heterocyclic medullary rays. Besides, the physicochemical characters such as total ash; acid insoluble ash; alcohol and water soluble extractive; tannins; sugar and starch percentages has shown variations. The percentage of berberine as berberine hydrochloride was also calculated through HPTLC densitometric method and it was found little higher than B. aristata and B. asiatica i.e. 3.16%. Thus, this species can be utilized as a possible substitute to Daruharidra.

Pharmacognostic evaluation of the roots of Berberis lycium royle

  • Srivastava, Sharad Kumar;Rawat, Ajay Kumar Singh;Mehrotra, Shanta
    • Advances in Traditional Medicine
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    • v.10 no.3
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    • pp.184-190
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    • 2010
  • Berberis lycium (family Berberidaceae) has a close affinity with B. aristata, used in India Traditional Systems of Medicine as a drug 'Daruharidra' for skin disease, jaundice, affection of eyes, and rheumatism. Various species of Berberis are being sold in India herbal drug market. During the market surveillance of different herbal drug markets of India, it was observed that almost all the markets either comprise of Berberis lycium or Berberis asiatica. Keeping this in view, in the present study attempts have been made to identify marker characters of this potent species.

Amperometric Biosensor for Urea

  • 하광수;서무룡
    • Bulletin of the Korean Chemical Society
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    • v.18 no.11
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    • pp.1149-1152
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    • 1997
  • An enzyme electrode for the amperometric measurement of urea was prepared by co-immobilizing L-glutamate dehydrogenase and urease onto an Immobilon-AV affinity membrane attached to a glassy carbon electrode. The reduced nicotinamide adenine dinucleotide(NADH) was used as the electroactive species. The electrochemical oxidation of NADH was monitored at +1.0 volt vs. Ag/AgCl. The enzyme-immobilized electrode was linear over the range of 2.0 × 10-5 to 2 × 10-4 M. The response time of the electrode was approximately 3 min. and the optimum pH of the enzyme immobilized membrane was pH 7.4-7.6 (Dulbcco's buffer solution). It was stable for at least two weeks or 50 assays. There was no interference from other physiological species, except from high levels of ascorbic acid.

DFT Calculation on the Electron Affinity of Polychlorinated Dibenzo-p-dioxins

  • Lee, Jung-Eun;Choi, Won-Yong;Mhin, Byung-Jin
    • Bulletin of the Korean Chemical Society
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    • v.24 no.6
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    • pp.792-796
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    • 2003
  • Polychlorinated dibenzo-p-dioxins (PCDDs) are extremely toxic and persistent environmental pollutants. Their chemical reactivities and other physicochemical/biological properties show a strong dependence on the chlorination pattern. With increasing the number of chlorines, dioxin congeners become more electronegative and gain higher electron affinities. The vertical electron affinities (VEA) are related with the LUMO energies of neutral molecules. LUMO energies of all PCDD congeners were calculated at the B3LYP/6-31G** level and those of some selected congeners at the level of B3LYP/6-311G**//B3LYP/6-31G** and B3LYP/cc-pvtz/ /B3LYP/6-31G**. The total energies of neutral and anionic species for dibenzo-p-dioxins (DD), 1469-TCDD, 2378-TCDD, and OCDD were calculated at the level of B3LYP/6-31G**, B3LYP/aug-cc-pvdz, and B3LYP/ aug-cc-pvtz//B3LYP/6-31G**. By using the four congeners with D2h symmetry as reference molecules, we could estimate VEA (B3LYP/aug-cc-pvdz) of 75 PCDD congeners based on the linear correlations between LUMO energy and VEA (B3LYP/6-31G**) and between VEA (B3LYP/6-31G**) and VEA (B3LYP/aug-ccpvtz// B3LYP/6-31G**). Results show that all PCDDs with the number of Cl ≥ 3 have positive electron affinities. The PCDD electron affinity values provided in this work can be a useful data set in understanding the congener-specific reactivities of dioxins in various environmental media.

Purification, Kinetics and Immunochemistry of Two Homotetrameric Lactate Dehydrogenase Isozymes in Pseudogobio esocinlus (Cypriniformes) (Pseudogobio esocinus (Cypriniformes) 젖산수소이탈효소 동질사량체들의 정제, 역학 및 면역화학)

  • 김명옥;염정주
    • The Korean Journal of Zoology
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    • v.32 no.4
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    • pp.420-428
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    • 1989
  • Pseudogobio esocinus의 심장, 신장 및 간 조직은 하부단위체 C를 함유하는 젖산수소이탈효소를 갖고 있음이 확인되었다. 하부단위체 A 및 B에 대한 유전자들의 조직 발현은 다른 포유동물의 것과 유사하였으며 분자량은 140,000 정도로 추정되었다. Oxamate gel을 사용한 chromatography결과 A4 동위효소는 NAD+보다는 column buffer에 의해 용출되었다. B4 동위효소는 CM-Sepharose column을 사용하여 부붙 정제되었다. B4 동위효소는 물론 A4 동위효소도 고농도의 Pyruvate에 의해 저해되었다. A4 동위효소의 affinity chromatography 상 행동과 Pyruvate 저해 정도로 보아 A4 등위효소는 B4 동위효소 두 역학적으로 유사하다고 사료된다. P. esainus A4 동위효소에 대한 항체는 mouse A4 등위효소와 반응하지만 동종의 B4 동위 효소와는 반응하지 않는 특성으로 보아 하부단위체 B는 진화과정에서 보존성이 낮은 것으로 사료된다. Three tissues of heart, kidney and liver of a primitive cvprinid Pseudogobio esocinus were found to have lactate dehydrogenase isozyme(5) containing subunit C. Tissue expressions of genes for subunits A and B were similar to those of mammalian species. Molecular weight of the isozymes were estimated to be 140,000 approximately. Affinity chromatography of the isozymes on the immobilized oxamate gel revealed that A4 isozyme was not elected in NAD+ but in column buffer. B4 isozune was isozpnatically purified by subjecting kidney extract to a CM-Sepharose column. Ae isozvme as well as B4 isozvme was inhibited by high concentrations of pyruvate. The affinity chromatographic behavior and susceptibility to pyruvate inhibition of the A4 isorpne suggest that A4 isozwne is similar to B4 isozyme kinetically. Antibodies against p. esocinus A4 isogyme reacted with mouse At isozyme but not with p. esocinus B4 isogyme, reflecting that subunit B is less conservative in its evolution.

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Theoretical Studies on Selectivity of Dibenzo-18-Crown-6-Ether for Alkaline Earth Divalent Cations

  • Heo, Ji-Young
    • Bulletin of the Korean Chemical Society
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    • v.33 no.8
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    • pp.2669-2674
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    • 2012
  • Crown ether is one of well-known host molecules and able to selectively sequester metal cation. We employed M06-2X density functional theory with IEFPCM and SMD continuum solvation models to study selectivity of dibenzo-18-crown-6-ether (DB18C6) for alkaline earth dications, $Ba^{2+}$, $Sr^{2+}$, $Ca^{2+}$, and $Mg^{2+}$ in the gas phase and in aqueous solution. $Mg^{2+}$ showed predominantly strong binding affinity in the gas phase because of strong polarization of CO bonds by cation. In aqueous solution, binding free energy differences became smaller among these dications. However, $Mg^{2+}$ had the best binding, being incompatible with experimental observations in aqueous solution. The enthalpies of the dication exchange reaction between DB18C6 and water cluster molecules were computed as another estimation of selectivity in aqueous solution. These results also demonstrated that $Mg^{2+}$ bound to DB18C6 better than $Ba^{2+}$. We speculated that the species determining selectivity in water could be 2:1 complexes of two DB18C6s and one dication.

Speciation of Arsenic from Soil Organic Matter in Abandoned Gold and Silver Mines, Korea

  • Ko, Il-Won;Kim, Kyoung-Woong;Hur, Hor-Gil
    • Journal of Applied Biological Chemistry
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    • v.51 no.1
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    • pp.36-44
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    • 2008
  • Organic forms of arsenic (As) were determined through fractionation procedure of soil organic matter (SOM) in soil, sediments and mine tailing samples from the Myungbong, Dongil, and Okdong mining areas of southern Korea. An alkaline extraction method was applied to soil samples followed by the fractionation procedures of SOM by the DAX-8 and XAD-4 resin adsorption method. Major fraction of organic As species (42% to 98%) was found in acid-soluble fraction, whereas minor fraction (0.1 % to 67.8%) was present in the humic-associated As. In acid-soluble fractions, the transphillic- and hydrophilic-associated As were dominant in addition to As binding with humic and fulvic SOM. Arsenic binding was the strongest between pH 6 to 8 and reduced to about 70% at both low and high pH regions. The amount of both transphillic and hydrophillic associated As was less changed than humic and fulvic-associated As, in both low and high pH regions. This apparently indicates that As has stronger affinity towards hydrophillic rather than hydrophobic organics. From the experimental observation of As-binding SOM in natural soil, the ligand exchange model may be a feasible explanation of transphillic and hydrophillic affinity of As.

나노 크기 적철석 입자 피복 모래를 이용한 지하수내 비소 3가와 5가의 제거 기술 개발

  • 고일원;이철효;이상우;김주용;김경웅
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2003.09a
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    • pp.78-82
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    • 2003
  • Development of hematite-coated sand was evaluated for the application of the PRB (permeable reactive barrier) in the arsenic-contaminated subsurface of the metal mining areas. The removal efficiency of As(III) and As(V), the effect of anion competition and the capability of arsenic removal in the flow system were investigated through the experiments of adsorption isotherm, arsenic removal kinetics against anion competition and column removal. Hematite-coated sand followed a linear adsorption isotherm with high adsorption capacity at low level concentrations of arsenic (< 1.0 mg/l). When As(III) and As(V) underwent adsorption reactions in the presence of anions (sulfate, nitrate and bicarbonate), sulfate caused strong inhibition of arsenic removal, and bicarbonate and nitrate caused weak inhibition due to specific and nonspecific adsorption onto hematite, respectively. In the column experiments, high content of hematite-coated sand enhance the arsenic removal, but the amount of the arsenic removal decreased due to the higher affinity of As(V) than As(III) and reduced adsorption kinetics in the flow system, Therefore, the amount of hematite-coated sand, the adsorption affinity of arsenic species and removal kinetics determined the removal efficiency of arsenic in the flow system. arsenic, hematite-coated sand, permeable reactive barrier, anion competition, adsorption.

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