• 대한의용생체공학회:의공학회지
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• 제30권5호
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• pp.373-380
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• 2009

In general, Independent component analysis (ICA) is a statistical blind source separation technique, used either in spatial or temporal domain. The spatial or temporal ICAs are designed to extract maximally independent sources in respective domains. The underlying sources for spatiotemporal data (sequence of images) can not always be guaranteed to be independent, therefore spatial ICA extracts the maximally independent spatial sources, deteriorating the temporal sources and vice versa. For such data types, spatiotemporal ICA tries to create a balance by simultaneous optimization in both the domains. However, the spatiotemporal ICA suffers the problem of source ambiguity. Recently, constrained ICA (c-ICA) has been proposed which incorporates a priori information to extract the desired source. In this study, we have extended the c-ICA for better analysis of spatiotemporal data. The proposed algorithm, i.e., constrained spatiotemporal ICA (constrained st-ICA), tries to find the desired independent sources in spatial and temporal domains with no source ambiguity. The performance of the proposed algorithm is tested against the conventional spatial and temporal ICAs using simulated data. Furthermore, its performance for the real spatiotemporal data, functional magnetic resonance images (fMRI), is compared with the SPM (conventional fMRI data analysis tool). The functional maps obtained with the proposed algorithm reveal more activity as compared to SPM.

• 대한의용생체공학회:의공학회지
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• 제28권1호
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• pp.17-23
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• 2007

Long-term potentiation (LTP) of synaptic transmission is the most widely studied model for learning and memory. However its mechanisms are not clearly elucidated and are a subject for intense investigation. Previous attempts to decipher cellular mechanisms and network properties involved a current-source density analysis (CSDA) of the LTP from small animal hippocampus measured with a limited number of microelectrodes (typically <3), only revealing limited nature of spatiotemporal dynamics. Recent advancement in multi-electrode array (MEA) technology allows continuous and simultaneous recordings of LTP with more than 60 electrodes. However CSDA via the standard Laplacian transform is still limited due to its relatively high sensitivity toward noise, inability of resolving overlapped current sources and sinks, and its requirement for tissue conductivity values. In this study, we propose a new methodology for improved CSDA. Independent component analysis and its joint use (i.e., Joint-ICA) are applied to extract spatiotemporal components of LTP. The results show that ICA and Joint-ICA are capable of extracting independent spatiotemporal components of LTP generators. The ICs of LTP indicate the reversing roles of current sources and sinks which are associated with LTP.

• 한국정보과학회:학술대회논문집
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• 한국정보과학회 2004년도 가을 학술발표논문집 Vol.31 No.2 (2)
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• pp.250-252
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• 2004

In this paper we apply several variations of independent component analysis( ICA) methods, such as spatial ICA (sICA), temporal ICA (tICA), and spatiotemporal ICA (stICA), to yeast cell cycle datasets, and compare their performance in finding components that result in gene clusters coherent with annotations and in extract ins meaningful temporal modes. It turns out that the results of tICA are superior to those of PCA, sICA, and stICA in terms of gene clustering and the temporal modes extracted by stICA highlights particular cellular processes.

• 대한의용생체공학회:의공학회지
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• 제27권4호
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• pp.170-179
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• 2006

The purpose of this study was to investigate the spatiotemporal cortical activation pattern and functional connectivity during visual perception of words. 61 channel recordings of electroencephalogram were obtained from 15 subjects while they were judging the meaning of Korean, English, and Chinese words with concrete meanings. We examined event-related potentials (ERP) and applied independent component analysis (ICA) to find and separate simultaneously activated neural sources. Spectral analysis was also performed to investigate the gamma-band activity (GBA, 30-50 Hz) which is known to reflect feature binding. Five significant ERP components were identified and left hemispheric dominance was observed for most sites. Meaningful differences of amplitudes and latencies among languages were observed. It seemed that familiarity with each language and orthographic characteristics affected the characteristics of ERP components. ICA helped confirm several prominent sources corresponding to some ERP components. The results of spectral and time-frequency analyses showed distinct GBAs at prefrontal, frontal, and temporal sites. The GBAs at prefrontal and temporal sites were significantly correlated with the LPC amplitude and response time. The differences in spatiotemporal patterns of GBA among languages were not prominent compared to the inter-individual differences. The gamma-band coherence revealed short-range connectivity within frontal region and long-range connectivity between frontal, posterior, and temporal sites.

• 한국의학물리학회지:의학물리
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• 제18권1호
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• pp.20-26
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• 2007

망막질환에 의해 변성된 망막에서는 시냅스 조직의 구성이나 전기적 특성이 정상망막과는 크게 다를 것으로 예상된다. 그러므로 본 논문에서는 다채널기록법을 이용하여 정상 망막과 변성 망막에서 망막파형을 기록한 후 그 파형을 주성분 분석법과 독립성분분석법을 이용하여 비교 분석하였다. 주성분분석법은 망막파형 분석법으로 확립된 방법인 반면 독립성분분석법은 EEG 신호의 분석법으로는 확립된 방법이나 아직 망막파형 분석법으로 사용된 적이 없으므로 본 연구진이 최초로 적용하여 보았다. 본 연구진에 의해 프로그램된 독립성분분석법을 위한 toolbox를 사용하여 시공간적 분석을 실시한 결과 정상 마우스에서는 독립성분분석법 또한 주성분분석법과 같이 망막신경절세포 파형의 분석 방법으로서의 사용가능성을 발견하였다 그러나 rd/rd 마우스에서는 독립성분분석법으로 그린 공간지도상에서 다수의 강한 활성과 약한 활성이 혼재되어 나오는 복잡한 양상을 띄었다. 추후 어떠한 기전에 의해 변성망막의 공간지도가 이렇게 복잡한 양상을 띄는지에 관한 연구가 진행되어야 할 것으로 사료된다.

• 대한의용생체공학회:의공학회지
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• 제26권4호
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• pp.223-230
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• 2005

This paper presents a new approach to investigate spatial correlation between independent components of brain alpha activity in functional magnetic resonance imaging (fMRI) and electroencephalography (EEG). To avoid potential problems of simultaneous fMRI and EEG acquisitions in imaging pure alpha activity, data from each modality were acquired separately under a 'three conditions' setup where one of the conditions involved closing eyes and relaxing, thus making it conducive to generation of alpha activity. The other two conditions -- eyes open in a lighted room or engaged in a mental arithmetic task, were designed to attenuate alpha activity. Using a Mixture Density Independent Component Analysis (MD-ICA) that incorporates flexible non-linearity functions into the conventional ICA framework, we could identify the spatiotemporal components of fMRI activations and EEG activities associated with the alpha rhythm. Then, the sources of the individual EEG alpha activity component were localized by a Maximum Entropy (ME) method that is specially designed to find the most probable dipole distribution minimizing the localization error in sense of LMSE. The resulting active dipoles were spatially transformed to 3D MRls of the subject and compared to fMRI alpha activity maps. A good spatial correlation was found in the spatial distribution of alpha sources derived independently from fMRI and EEG, suggesting the proposed method can localize the cortical areas responsible for generating alpha activity successfully in either fMRI or EEG. Finally a functional connectivity analysis was applied to show that alpha activity sources of both modalities were also functionally connected to each other, implying that they are involved in performing a common function: 'the generation of alpha rhythms'.