• Plant Breeding and Biotechnology
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• 제5권4호
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• pp.269-281
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• 2017

With the continual development of genetically modified (GM) crops, it has become necessary to develop detailed and effective molecular characterization methods to select candidate events from a large pool of transformation events. Relative to traditional molecular analysis methods such as the polymerase chain reaction (PCR) and Southern blot hybridization, next generation sequencing (NGS) technology for whole-genome sequencing of complex crop genomes had proven comparatively useful for in-depth molecular characterization. In this study, four transformation events, including one in Bacillus thuringiensis (Bt)-resistant rice, one in resveratrol-producing rice, and two in beta-carotene-enhanced soybeans, were selected for molecular characterization. To merge NGS analysis and Southern blot-hybridization results, we confirmed the transgene insertion sites, insertion construction, and insertion numbers of these four transformation events. In addition, the read-coverage depth assessed by NGS analysis for inserted genes might provide consistent results in terms of inserted T-DNA numbers in case of complex insertion structures and highly duplicated donor genomes; however, PCR-based methods can produce incorrect conclusions. Our combined method provides an effective and complete analytical approach for whole-genome visual inspection of transformation events that require biosafety assessment.

• Journal of Ecology and Environment
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• 제42권4호
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• pp.210-218
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• 2018

Background: Soil respiration (Rs) is a major factor of the absorption and accumulation of carbon through photosynthesis in the ecosystem carbon cycle. This directly affects the amount of net ecosystem productivity, which affects the stability and sustainability of the ecosystem. Understanding the characteristics of Rs is indispensable to scientifically understand the carbon cycle of ecosystems. It is very important to study Rs characteristics through analysis of environmental factors closely related to Rs. Rs is affected by various environmental factors, such as temperature, precipitation, soil moisture, litter supply, organic matter content, dominant plant species, and soil disturbance. This study was conducted to analyze the effects of micro-topographical differences on Rs in forest vegetation by measuring the Rs on the ridge and southern slope sites of the broadly established Quercus mongolica forest in the central Korean area. Method: Rs, Ts, and soil moisture data were collected at the southern slope and ridge of the Q. mongolica forest in the Mt. Jeombong area in order to investigate the effects of topographical differences on Rs. Rs was collected by the closed chamber method, and data collection was performed from May 2011 to October 2013, except Winter seasons from November to April or May. For collecting the raw data of Rs in the field, acrylic collars were placed at the ridge and southern slope of the forest. The accumulated surface litter and the soil organic matter content (SOMC) were measured to a 5 cm depth. Based on these data, the Rs characteristics of the slope and ridge were analyzed. Results: Rs showed a distinct seasonal variation pattern in both the ridge and southern slope sites. In addition, Rs showed a distinct seasonal variation with high and low Ts changes. The average Rs measurements for the two sites, except for the Winter periods that were not measured, were $550.1\;mg\;CO_2m^{-2}h^{-1}$ at the ridge site and $289.4\;mg\;CO_2m^{-2}h^{-1}$ at the southern slope, a difference of 52.6%. There was no significant difference in the Rs difference between slopes except for the first half of 2013, and both sites showed a tendency to increase exponentially as Ts increased. In addition, although the correlation is low, the difference in Rs between sites tended to increase as Ts increased. SMC showed a large fluctuation at the southern slope site relative to the ridge site, as while it was very low in 2013, it was high in 2011 and 2012. The accumulated litter of the soil surface and the SOMC at the depth range of 0~5 cm were $874g\;m^{-2}$ and 23.3% at the ridge site, and $396g\;m^{-2}$ and 19.9% at the southern slope site. Conclusions: In this study, Rs was measured for the ridge and southern slope sites, which have two different results where the surface litter layer is disturbed by strong winds. The southern slope site shows that the litter layer formed in autumn due to strong winds almost disappeared, and while in the ridge site, it became thick due to the transfer of litter from the southern slope site. The mean Rs was about two times higher in the ridge site compared to that in the southern slope site. The Rs difference seems to be due to the difference in the amount of litter accumulated on the soil surface. As a result, the litter layer supplied to the soil surface is disturbed due to the micro-topographical difference, as the slope and the change of the community structure due to the plant season cause heterogeneity of the litter layer development, which in turn affects SMC and Rs. Therefore, it is necessary to introduce and understand these micro-topographical features and mechanisms when quantifying and analyzing the Rs of an ecosystem.

• Journal of Plant Biotechnology
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• 제36권3호
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• pp.224-229
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• 2009

Human lactoferrin is an iron-binding glycoprotein with many biological activities, including the protection against microbial and virus infection and stimulation of the immune system. We introduced a human lactoferrin (hLf) cDNA under the control of 35S promoter into sweet potato by particle bombardment. Transgenic plants were regenerated via somatic embryogenesis. Transgenic plants were produced typical tuberous roots in soil. PCR, Southern and northern analyses confirmed that the hLf cDNA was incorporated into the plant genome and was properly expressed in plants. Western blot analysis showed that the 80 kDa full length hLf protein was produced in transgenic tuberous roots. Overall results indicated that sweet potato would be an excellent host to produce human therapeutic proteins.

• 한국자원식물학회지
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• 제17권2호
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• pp.102-106
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• 2004

남부 지방의 답전작 재배에 적합한 왕골의 재식밀도를 구명코자 다수성 품종으로 선발된 광산조생종을 공시하여 시험했다. 그 결과, 경장, 분얼수, 출수된 경수, 경태 등의 수량구성형 질은 18${\times}$18 cm 이식구에서 가장 우수하였고, 건피수량, 건수 수량에서도 18${\times}$18 cm 이식구에서 가장 우수하였다.

• Plant Resources
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• 제7권3호
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• pp.211-215
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• 2004

The effects of topping method on the yield and major agronomic traits of two varieties, Sunwol and Youngjun of Alisma plantago, were investigated in the Southern region. Plant height, yield of fresh root, yield of dry root and weights of total roots were the highest in the variety of Sunwol, and at the plots with topping of four times cutting in flowering in main culm (Treatment No.1). Considering from our results, optimum topping method is most likly be topping of four times cutting in flowering in main culm in the Sunwol variety.

• The Plant Pathology Journal
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• 제15권5호
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• pp.308-310
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• 1999

A fungus associated with gray blight on tea plant (Camellia sinensis) was identifed as Pestalotiopsis theae based on the mycological characteristics. Mycelial growth on potato dextrose agar and size and shape of conidia of P. theae were similar to those of P. longiseta, but P. theae was different from P. longiseta in the color of three median cells and the number of apical appendages. Artificial inoculation of conidial suspension or mycelial mats on the wounded leaves and shoots of healthy plants induced the same disease, respectively. The Korean native variety was relatively. The Korean native variety was relatively more resistat to P. theae than a Japanese variety‘Yabukita’which has bee recently introduced and planted in large areas of southern parts of Korea. Here, we report the report the first record of gary blight caused by P. theae on tea plant in Korea.

• Plant Resources
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• 제8권3호
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• pp.258-262
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• 2005

In autumn, to determine the optimal planting date and plant density of rapeseed in southern areas of Korea, Yudal variety for autumn sowing, the highest yielding variety was grown under three different planting dates and five different plant densities. Yield components such as plant height, ear length, number of seedling stand per $m^2$, number of branches and pod length were highest at the plots with Sep. 30 of planting date and 30/20 cm drilling of plant density. Yield of seed, oil and 1,000 grains weight were highest at the Sep.30 of planting date and 30/20 cm drilling of plant density. Judging from the results reported above, at optimum planting date and plant density of rapeseed seemed to be Sep.30 of planting date and 30/20cm plant density in autumn sowing.

• 한국조경학회지
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• 제31권2호
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• pp.83-93
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• 2003

This study was conducted for an understanding of a threatened plant species,“Penthorum chinense”, which is a vegetation structure and environmental characteristic in the southern part of Ibaraki, Japan. We selected distribution and contiguity area where P. chinense is not distributed and we set up 69 sites by the quardrat method. The surveyed general characters in each site include mean-height, mean-coverage, moisture condition water depth coverage and depth of litter layer. We calculated the degree of succession by the survey data and grasped the main distribution area, vegetation structure, growth environment of P. chinense by TWINSPAN classification and DCA ordination. The results of this study are as follows. First, P. chinense habitat was categorized into the riverside and abandoned paddy fields. The riverside was influenced by natural disturbance caused by flooding and drought. These conditions led to a poor P. chinense growth. The abandoned paddy fields as the artificial disturbance area have high potential value, because the area can preserve P. chinense growth space by succession control and water management. second, we executed TWINSPAN analysis based on vegetation coverage data of survey sites. The vegetation types were classified into the three categories: annual plant flora(P. chinense dominates in wet state), perennial plant flora(Solidago altissima dominates in dry state), and perennial plant flora(Phragmites communis dominates in wet state). Third, the data was ordinated by DCA. The sample sequences along the first and second DCA axes effectively reflected moisture condition, number of species, mean height, coverage of litter layer and degree of succession. Especially, P. chinense flora has the high correlation with moisture condition and number of species.

• Journal of Plant Biotechnology
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• 제30권1호
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• pp.103-108
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• 2003

본 연구는 난분해성 농약의 자연분해를 유도하기 위하여 ${\gamma}$-BHC를 탄소원으로 이용하여 호기적으로 자화하는 미생물 (Sphingomonas paucimobilis)에서 분리된 탈염소화효소 중 ${\gamma}$-BHC분해의 첫단계에 관여하는 linA유전자를 담배에 도입하여 BHC에 활성을 나타내는 형질전환 시물체를 만들었다. LinA 유전자를 함유한 pJK 108 백터를 제작하여. Agrobacterium를 이용한 leaf disk transformation 방법으로 담배에 형질전환시켰으며, northern분석 및 Southern분석을 통해 형질전환 개체에서 linA유전자의 도입과 linA유전자 유래의 mRNA가 전사됨을 확인하였다. Western 분석에서 linA단백질의 발현을 확인하였고, gas chromatography를 이용하여 담배 형질전환 개체에서 BHC가 ${\gamma}$-PCCH와 1,2.4-TCB로 분해되는 것을 확인하였다.

• Journal of Plant Biotechnology
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• 제32권3호
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• pp.161-165
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• 2005

Agrobacterium과 자엽절편의 공동배양으로 박과작물인 오이의 형질전환체를 생산하였다. 오이 배양재료는 "은침"의 자엽절편을 사용하였으며, reporter유전자로서 gus유전자와 선발표지로서 bar 또는 nptII유전자로 각각 제작된 pPTN289와 pPTN290벡터를 GV3101, LBA4404, EHA101에 형질전환하여 공동배양하였다. 형질전환빈도는 Agrobacterium의 종류에 따라 현저한 차이가 있었으며, 특히 사용한 균주중 EHA101에서 0.35%로 가장 높았다. 선발배지에서 형성된 오이 식물체중 제초제 저항성 (12개체)과 paromomycin 저항성 (3개체)을 얻었고, 이들 모두 gus양성반응 나타냈다. Southern분석에 의하여 오이 형질전환체의 genome에 gus유전자가 도입되어 있음을 확인 하였다.