• Food Science and Biotechnology
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• 제18권2호
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• pp.519-525
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• 2009

A bacterial strain (Strain N-08) capable of extracellularly producing high level of non-reducing oligosaccharide (NR-OS) isolated from soil. The strain was identified phylogenetically by 16S rDNA sequence analysis and found to be very close to Arthrobacter crystallopoietes. The high production of NR-OS was observed in the basal culture medium containing maltose as a sole carbon source. The NR-OS in culture supernatant was purified by glucoamylase treatment and Dowex-1 (OH.) ion exchange chromatography and its structure was characterized. This oligosaccharide consisted of only glucose. Methylation analysis indicated that this fraction was composed mainly of non-reducing terminal glucopyranoside. Matrixassisted laser-induced/ionization time-of-flight (MALDI-TOF) and electrospray ionization-mass spectrometry (ESI-MS)/MS analyses suggested that this oligosaccharide comprised non-reducing disaccharide unit with 1,1-glucosidic linkage. When this disaccharide was analyzed by $^1H$-NMR and $^{13}C$-NMR, it gave the same signals with $\alpha$-D-glucopyranosyl-(1,1)-$\alpha$-Dglucopyranoside. These results indicated that the NR-OS produced by A. crystallopoietes N-08 was ${\alpha}1$,${\alpha}1$-trehalose. This is the first report of the trehalose which can be produced directly from maltose by A. crystallopoietes N-08.

• Plant Biotechnology Reports
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• 제5권4호
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• pp.309-315
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• 2011

Rice grown in anaerobic waterlogged soil accumulates ammonium as a major source of nitrogen (N). We have compared the physiological symptoms of rice seedlings subjected to N-starvation stress with those receiving sufficient N, based on measurements of shoot/root length and weight and an analysis of protein expression patterns. N starvation marginally increased root growth but notably decreased shoot biomass. N uptake was reduced by >50% in the roots and shoots of N-starved seedlings. To better understand the mechanism of N starvation in rice, we performed a comparative proteome analysis of proteins isolated from rice leaves. Twenty-five differentially expressed proteins were analyzed by matrixassisted laser desorption/ionization time-of-flight (TOF) mass spectrometry and electron spray ionization quadrupole TOF. Functional analysis of the N-starvation response proteins suggested their involvement in protein synthesis and fate, metabolism, and defense. These results indicate that these proteins may play important roles in regulating the plant's complex adaptation responses for N use during N starvation. The proteins may be useful for further characterization of protein function in plant N nutrition.

• 한국토양비료학회지
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• 제43권4호
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• pp.490-497
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• 2010

근권토양으로부터 고추역병균을 포함한 다양한 식물 병원성 곰팡이에 대하여 항균활성이 강한 세균을 분리하였다. 이 세균은 16S rRNA gene서열 분석 결과 Lysobacter enzymogens로 동정되었고 LE429로 명명 하였다. LE429는 chitinase, ${\beta}-1$, 3-glucanase, protease, gelatinase, lipase 및 항생물질과 같은 다양한 이차대사산물을 분비하였다. 항생물질은 diaon HP-20 및 sephadex LH-20 컬럼크로마토그래피 및 HPLC로 정제하여, GC-EI 및 GC-CI분석을 통하여 phenylacetic acid로 동정되었다. Field 실험에서 LE429의 고추 병해 억제 효과를 조사하기 위해 LE429배양액(CB), Neem oil 용액 (NO), LE429배양액과 Neem oil 용액을 섞은 혼합액(CB+NO), 그리고 대조구로서 물(CON)을 각각 고추에 처리하였다. 고추의 수량구성요소는 일반적으로 CB 처리구가 가장 높았고, CB+NO, CON 그리고 NO 순서로 나타났다. CB 처리구에서 병원성 곰팡이는 강하게 억제 되었지만, 몇몇 해충이 발견되었다. NO 처리구에서는 해충은 발견 되지 않았지만, 병원성 곰팡이가 발견 되었다. 하지만, CB+NO 처리구에서 병원성 곰팡이 및 해충이 전혀 발견 되지 않았다. 결론적으로, 2차 대 사산물을 생산하는 LE429와 Neem oil의 혼합액은 고추에 발생하는 병원성 곰팡이와 해충에 대한 좋은 생물학적 방제제가 될 수 있다고 사료된다.

• 미생물학회지
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• 제53권3호
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• pp.163-169
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• 2017

복숭아 수확시기에 낙과한 토양에서 Lactobacillus sp. D4와 D5 균주를 분리하였다. 분리한 Lactobacillus sp. D4와 D5 균주를 동정하기 위하여 형태학적 동정, 생화학적 동정 및 16S rRNA 유전자서열 분석을 수행하였다. 16S rRNA 유전자서열 분석 결과 Lactobacillus sp. D4는 Lactobacillus plantarum subsp. plantarum ATCC $14917^T$과 Lactobacillus pentosus ATCC $40997^T$에 각각 99.05%, 98.98% 일치하였으며, Lactobacillus sp. D5는 Lactobacillus pentosus ATCC $40997^T$, Lactobacillus plantarum subsp. plantarum ATCC $14917^T$에 각각 98.71%, 98.64% 일치하였다. Lactobacillus sp. D4와 D5 균주는 당 이용성 비교에서 Lactobacillus plantarum ATCC $14917^T$과 Lactobacillus pentosus ATCC $8041^T$에 비교하여 다른 결과를 나타내었다. 정확한 동정을 위하여 VITEK MS matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) 분석, multiplex PCR, random amplified polymorphic DNA (RAPD)-PCR을 수행하였다. 이러한 결과에 근거하여 Lactobacillus sp. D4와 D5 균주는 Lactobacillus plantarum으로 동정되었다.

• 한국환경과학회지
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• 제28권8호
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• pp.689-700
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• 2019

The adsorption and leaching characteristics of five ionic pesticides including four acidic pesticides (2,4-D, dicamba, MCPA, and MCPP) and one amphoteric pesticide (imazaquin) in agricultural soils were investigated. Soils around spring waters that were heavily affected by pesticide run-off and soils around wells considering the regional characteristics in Jeju Island were collected at 24 stations. The Freundlich constant, $K_F$ value, which is a measure of the adsorption capacity, decreased in the order of 2,4-D > MCPA > MCPP > dicamba > imazaquin. The adsorption capacity of these ionic pesticides decreased with increasing pH owing to the effects of ionization of pesticides and different ionizable functional groups of soils. The leaching of ionic pesticides in the soil column showed a reverse relationship with their adsorption in soils, namely, the ionic pesticides were leached more quickly for the pesticides with lower adsorption capacity. The groundwater contamination potential of the ionic pesticides was evaluated in the order of imazaquin > MCPA > MCPP > dicamba > 2.4-D according to the groundwater ubiquity score based on soil Koc and the half-life of the pesticide.

• 대한전기학회:학술대회논문집
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• 대한전기학회 2009년도 제40회 하계학술대회
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• pp.1420_1422
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• 2009

Lightning currents are one of major influences on the dynamic performance of counterpoise. High lightning current causes the dynamic grounding performance of counterpoise due to very fast fronted pulses. The previous analysis has often been based on quasi-static approximation that can not be applicable to very fast fronted pulses. To extend the analysis for fast fronted pulses in this paper, the full-wave analysis method based on the rigorous electromagnetic-field theory approach is used and the effects of the ionization of the soil are disregarded. Based on the simulation results, the empirical formulas applicable for slow and fast fronted lightning current pulses are reviewed; therefore, the validity of the theoretical approach is verified through comparison between the calculated and measured results.

• 한국지하수토양환경학회지:지하수토양환경
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• 제15권1호
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• pp.9-18
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• 2010

In this study, Solid-phase micro-extraction (SPME) with Gas Chromatograph using Flame Ionization Detector (GC/FID) was studied as a possible alternative to liquid-liquid extraction for the analysis of Methyl tert-butyl ether (MTBE) and Tertiary-butyl ether (TBA) in water and an optimization condition of trace analysis of MTBE and TBA using the design of experiment (DOE) was described. The aim of our research was to apply experimental design methodology in the optimization condition of trace analysis of fuel oxygenated compounds in soil-phase microextraction with GC/FID. The reactions of SPME were mathematically described as a function of parameters of Temp ($X_1$), Volume ($X_2$), Time ($X_3$) and Salt ($X_4$) being modeled by the use of the partial factorial designs, which was used for fitting 2nd order response surface models and was alternative to central composite designs. The model predicted agreed with the experimentally observed result ($Y_1$(MTBE, $R^2$ = 0.96, $Y_2$ (TBA, $R^2$ = 0.98)). The estimated ridge of the expected maximum responses and optimal conditions for MTBE and TBA were 278.13 and (Temp ($X_1$) = $48.40^{\circ}C$, Volume ($X_2$) = 73.04 mL, Time ($X_3$) = 11.51 min and Salt ($X_4$) = 12,50 mg/L), and 127.89 and (Temp ($X_1$) = $52.12^{\circ}C$, Volume ($X_2$) = 88.88mL, Time ($X_3$) = 65.40 min and Salt ($X_4$) = 12,50 mg/L), respectively.

• 환경생물
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• 제22권4호
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• pp.487-493
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• 2004

To investigate the antifungal activity related protein in pesticidal bacteria, a bacterial strain LTD was isolated from soil collected at Gimje in Jeonbuk province, Korea, and identified as Bacillus subtilis LTD based on a API50 CHB kit and 168 rDNA sequencing. It has an antifungal activity against 9 plant pathogenic fungi in a paper disc assay. The antifungal activity- deficient mutant, B. subtilis mLTD was induced at a 5 kGy dose of $^{60}Co$ gamma radiation. Using the two-dimensional electrophoresis and the matrix assisted laser desorption ionization time-of-flight mass spectrometry, the comparison analysis of proteins between the wild and mutant were performed. A major intracellular serine proteinase IspA (MW: 32.5 kDa), a NAD (P) H dehydrogenase (MW: 20.0 kDa), and a stage II sporulation protein AA, SpoIIAA (MW: 14.3kDa) were detected only in the B. subtilis LTD. These results suggested that the functions of these proteins found only in the B. subtilis LTD could. be closely related to the antifungal activity against plant pathogenic fungi.

• Journal of Microbiology and Biotechnology
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• 제19권1호
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• pp.51-54
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• 2009

Myxobacteria, Gram-negative soil bacteria, are a well-known producer of bioactive secondary metabolites. Therefore, this study presents a methodological approach for the high-throughput screening of secondary metabolites from 4 wild-type Myxococcus xanthus strains. First, electrospray ionization mass spectrometry (ESI-MS) was performed using extracellular crude extracts. As a result, 22 metabolite peaks were detected, and the metabolite profiling was then conducted using the m/z value, retention time, and MS/MS fragmentation pattern analyses. Among the peaks, one unknown compound peak was identified as analogous to the myxalamid A, B, and C series. An analysis of the tandem mass spectrometric fragmentation patterns and HR-MS identified myxalamid K as a new compound derived from M. xanthus. In conclusion, LC-MS/MS-based chemical screening of diverse secondary metabolites would appear to be an effective approach for discovering unknown microbial secondary metabolites.

• 한국환경농학회지
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• 제35권3호
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• pp.166-174
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• 2016

농경지 토양에서 대상항생제 6종(amoxicillin, ampicillin, chlortetracycline, enrofloxacin, oxytetracycline, tetracycline을 아세트산 함유 아세토니트릴, Na₂Cit.5H₂O, Na₃Cit.2H₂O과 Na₂-EDTA로 추출 후 C₁₈으로 정제하여 LC-MS/MS로 분석하는 모니터링을 수행하였다. 그 중 2종의 항생제, chlortetracycline과 enrofloxacin이 국내 농경지 토양에서 검출되었다. 제안한 분석법은 토양 중 잔류 항생제 모니터링을 위한 빠르고 간편한 시험법이었고 다양한 활용이 가능할 것으로 보인다.