• Journal of the Korean Data and Information Science Society
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• 제23권1호
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• pp.39-51
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• 2012

군집분석은 마이크로어레이 발현자료에서 유전자 혹은 표본들의 유사한 특성을 갖는 연관구조를 조사하는데 중요한 도구이다. 본 논문에서는 마이크로어레이 자료에서 계층적 군집방법, K-평균법, PAM (partitioning around medoids), SOM (self-organizing maps) 그리고 모형기반 군집방법 들의 성능을 3가지 군집 타당성 측도인 내적 측도, 안정적 측도 그리고 생물학적 측도를 가지고 비교분석하고자 한다. 모의실험을 통해 생성된 자료와 실제 SRBCT (small round blue cell tumor) 자료를 가지고 여러 가지 군집방법들의 성능을 비교하였으며 그 결과 모의실험 자료에서는 거의 모든 방법들이 3가지 군집측도에서 원래 자료와 일치하는 좋은 군집 결과를 나타내었고 SRBCT 자료에서는 모의실험 자료처럼 명확한 군집화 결과를 보여주지는 않으나 내적측도의 실루엣 너비 (Silhouette width) 관점에서는 PAM 방법, SOM, 모형기반 군집방법 그리고 생물학적 측도에서는 PAM 방법과 모형기반 군집방법이 모의실험 결과와 비슷한 결과를 얻었고 안정적 측도에서 모형기반 군집방법이 다른 방법들보다 좋은 군집결과를 보여주었다.

• Journal of Microbiology and Biotechnology
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• 제11권1호
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• pp.97-105
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• 2001

The viability of Bifidobacterium longum KCTC 3128, entrapped in calcium alginate beds in simulated gastroenteric juices (gastric and bile salt solution), was tested to evaluate the influences of several parameters (gel concentration, bead size, and initial cell number). The death rate of B. longum in beads after being sequentially exposed to simulated gastric juices and bile salt solution decreased propertionally with increasing both the alginate gel concentration and bead size. The number of initial cell loading in beads affected the numbers of survivors after being exposed to these solutions, while the death rate of the viable cells were not affected. From the results obtained, the influence of entrapment parameters on the survival of bifidobacteria was quantitatively and systematically evaluated by using a mathematical method.

• 대한의용생체공학회:의공학회지
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• 제13권2호
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• pp.97-106
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• 1992

The cardiac activation process uslng three dimensional ventricular model is simulated. To study this theme, we constructed a cardiac ventricular model and simulated the cardiac activation process using the action potential duration and the activation time. The cardiac ventricular model is generated by the loglcal combination of the elliptic equations. The action potential duration could be obtained from the fact that It Is linearly distributed between model cells. The cardiac activation process was simulated by the law of "all-or-none". Based on the activation time and the action potential duration the cardiac potential at the arbitrary time after the activation of the model cell was computed. To test the validity of model, the comparison of the results of model simulation with the physiological data was performed. In conclusion, this model shows the simular results which is comparable to the 1 Pal conduction of the cardlac excitation.xcitation.

• 대한의용생체공학회:학술대회논문집
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• 대한의용생체공학회 1992년도 추계학술대회
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• pp.146-149
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• 1992

The cardiac depolarization model using three dimensional ventricular model is simulated. To study this theme, we constructed a cardiac ventricular model and simulated the cardiac activation process using the action potential duration and the activation time. The cardiac potential model is generated by the logical combination of the elliptic equations. The action potential duration could be obtained from the fact that it is linearly distributed between model cells. The cardiac activation process was simulated by the law of "all-or-none". Based on the activation time and the action potential duration the cardiac potential at the arbitrary time after the activation of the model cell was computed. To test the validity of model, the comparison the results of model simulation with the physiological data was performed.

• 대한의용생체공학회:의공학회지
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• 제6권1호
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• pp.55-64
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• 1985

The cardiac activation process using three dimensional ventricular model is simulated.To study this theme, we constructed a cardiac ventricular model and simulated the cardiac activation process using the action potential duration and the activation time. The cardiac ventricular model is generated by the logical combination of the elliptic equations. The action potential duration could be obtained from the fact that it is linearly distributed between model cells. The cardiac activation process was simulated by the law of "all-or-none" Based on the activation time and the action potential do-ration the cardiac potential at the arbitrary time after the activation of the model cell was computed. To test the validity of model, the comparison of the results of model simulation with the physiological data was performed. In conclusion, this model shows the simular results which is comparable to the real conduction of the cardiac excitation.xcitation.

• 한국농공학회지
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• 제44권3호
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• pp.146-156
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• 2002

The objective of this study was to develop a modified CREAMS model for paddy field conditions. The model simulates daily balance of water and nutrient from irrigated paddies using meteorological, irrigation, and agricultural management data. The model simulates daily evapotranspiration of paddy using Penman equation and determines daily flooding depth changes. Total nitrogen and phosphorus concentrations within flooding water, surface runoff, and leaching water from a paddy field also can be simulated. Parameters of the model were calibrated using observed data of the Agricultural Experiment Station of the Seoul National University in Suwon Korea. The model was applied for the irrigation period of paddy field in Gicheon area when 1,234 mm annual rainfall was occurred. The simulated losses of the total nitrogen and total phosphorous were 11.27 kg/ha and 0.98 kg/ha, respectively. There was a good agreement between observed and simulated data. It was found that CREAMS-PADDY model was capable of predicting runoff and nutrient losses from irrigated paddy fields.

• Water Engineering Research
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• 제4권3호
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• pp.141-154
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• 2003

Nonpoint source pollutants from agriculture are identified as one of the main causes of water quality degradation in the United States. The Hydrological Simulation Program-Fortran (HSPF) was used to simulate runoff, nitrogen, and sediment loads from an urbanizing watershed; the Polecat Creek watershed located in Virginia. Model parameters related to hydrology and water quality were calibrated and validated using observed hydrologic and water quality data collected at the watershed outlet and at several sub-watershed outlets. A comparison of measured and simulated monthly runoff at the outlet of the watershed resulted in a correlation coefficient of 0.94 for the calibration period and 0.74 for the validation period. The annual observed and simulated sediment loads for the calibration period were 220.9 kg/ha and 201.5 kg/ha, respectively. The differences for annual nitrate nitrogen ($NO_3$) loads between the observed and simulated values at the outlet of the watershed were 5.1% and 42.1% for the calibration and validation periods, respectively. The corresponding values for total Kjeldahl nitrogen (TKN) were 60.9% and 40.7%, respectively. Based on the simulation results, the calibrated HSPF input parameters were considered to adequately represent the Polecat Creek watershed.

• Journal of Microbiology and Biotechnology
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• 제12권6호
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• pp.962-971
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• 2002

The current study proposes a simple monodimensional model to estimate the linear growth rate of photosynthetic microorganisms in flat-plate photobioreactors (FPPBRs) during batch cultivation. As a model microorganism, Chlorella kessleri was cultivated photoautotrophically in FPPBRs using light-emitting diodes (LEDs) as the light sources to provide unidirectional irradiation in the photobioreactors. Various conditions were simulated by adjusting both the intensity of the light and the height of the culture. The validity of the proposed model was examined by comparing the linear growth rates measured with the predicted ones obtained from the proposed model. Accordingly, the value of $\frac{K\cdot\mu m}{\alpha\cdot L}log(I_0\cdot{I_s}^{\varepsilon 1)\cdot {I_c}^{-\varepsilon})$ was proposed as an approximate index for strategies to obtain the maximal lightn yield under light-limiting conditions for high-density algal cultures and as a control parameter to improve the photosynthetic productivity and efficiency.

• 대한의용생체공학회:학술대회논문집
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• 대한의용생체공학회 1997년도 추계학술대회
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• pp.218-221
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• 1997

In this paper, we designed a myocaldial ischemia model based on L-R dynamic model including hyperkalemia and anoxia. Using the model, we simulated the effects of ionic concentration $[K^+]_o$ and intracellular $[ATP]_i$ on action potential in single cardiac cell. Also we evaluated this model by comparing the simulated results with that of other researches. In luther research, we are going to consider the effect of acidosis quantitatively.

• 대한의용생체공학회:학술대회논문집
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• 대한의용생체공학회 1994년도 추계학술대회
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• pp.61-64
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• 1994

This paper describes the construction of an anisotropic three dimensional ventricular model based on the bidomain model. The cardiac artivation process in the normal cardiac cell and the myocardiac ischemic cell are simulated by the Huygen's principle. The depolarization process in the myocardial ischemia displays the delayed activation compared to the normal state. The repolarization process is simulated by the myocardial potential at the arbitrary ellapsed time after activation process.