• Title/Summary/Keyword: Shannon diversity index

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An Ecological Analysis of the Relationship between Diet Diversity and Nutrient Intake (식품 섭취의 다양성과 영양소 섭취 수준과의 관련성에 대한 생태학적 분석)

  • Kim, Jung-Yeon;Moon, Soo-Jae
    • Journal of Nutrition and Health
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    • v.23 no.5
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    • pp.309-316
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    • 1990
  • The relationship between diet diversity and nutrient intake was studied. Diet diversity, caloric intake and dietary nutrient density values were examined as contributors to the level of selected nutrients with the use of data obtained from 14-day dietary records of 60 college women. The subjects were grouped into quartiles on the basis of level of intake of each of the specific nutrients. The indexes of diet diversity were the number of different food items and Shannon & Weaver's diversity index. Differences in diet diversity were found among nutrients and indexes. In general, calorie and protein intake were more diverse, on the other hand, intake of vitamins A and C were less diverse. With the exception of calcium, iron, vitamin $B_1$, niacin and vitamin C, the number of food items increased at each quartile of intake of specific nutrients. It was concluded that for some nutrients(as with fat), the number of food items consumed may be useful in estimating nutrient intakes. For other nutrients(as with calcium), utilization of nutrient-specific diversity indexes is necessary. Increased nutrient intake was accompanied by increased caloric intake(except vitamins A and C) and dietary nutrient density for all nutrients.

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Successional changes in plant composition over 15 years in a created wetland in South Korea

  • Son, Deokjoo;Lee, Hyohyemi;Cho, Kang-Hyun;Bang, Jeong Hwan;Kwon, Oh-Byung;Lee, Eun Ju
    • Journal of Ecology and Environment
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    • v.42 no.4
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    • pp.183-190
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    • 2018
  • Backgrounds: The main purpose of this research was to assess changes in vegetation structure, wetland index, and diversity index for a 15-year-old created wetland in Jincheon, South Korea. The created wetland consists of four sub-wetlands: a kidney-shaped wetland, a ditch, an ecological pond, and a square wetland. Vegetation and water depth data were collected at each site in 1999 and 2013, and Shannon diversity and wetland indices were calculated. Results: The total number of plant species increased from 18 in 1999 to 50 in 2013, and the ecological pond in 1999 and the ditch in 2013 presented the highest diversity indices (2.5 and 3.2, respectively). Plant species were less diverse in 1999 than in 2013, presumably because these initial wetlands were managed periodically for water purification and installation of test beds. The proportion of wetland plants, including obligate wetland and facultative wetland species, decreased from 83 to 56%, whereas upland plants, including obligate upland and facultative upland species, increased from 17 to 44%. After ceasing water supply, water depth in all four sub-wetlands declined in 2013. Thus, upland plants established more readily at these sites, resulting in higher diversity and lower wetland indices than in 1999. Conclusions: The major floristic differences between 1999 and 2013 were an increase in the number of upland plants and a decrease in wetland species. Although wetland indices were lower in 2013, the created wetland performed important ecosystem functions by providing habitats for wetland and upland plants, and the overall species diversity was high.

A Study on the Stand Structure of Korean Fir Natural Forest in Naesorak through the Investigation of Stand Structure Diversity Features (구조다양성 표현인자 연구를 통한 내설악 전나무 고목림 (자연림) 구조 조사)

  • Youn, Young-Il
    • Korean Journal of Environmental Biology
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    • v.29 no.4
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    • pp.345-352
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    • 2011
  • We investigated 12 plots using Herles' diversity of structure feature calculation method, which is based on the Shannon-Weaver-Index for estimation of species diversity. This study sought to facilitate a more systematic understanding of the structure of the forest stands in the Korean fir natural forest in Naeseorak. Although the change in the forest structure is dependent on the change in phase, factors of the natural forest were confirmed by associating individual structure features. As shown in the results of diversity of structure features, the diversity of the structure of the fir tree natural forest in Naeseorak was relatively low. The association between species diversity and overall factors (diversity) related with the change in the structure was found to be weak. The association between the number of trees and the diversity of forest structure stands was moderate, showing that the higher the number of trees, the less diverse the forest structure is. In most of the investigated plots, stem volume and volume of dead tree were associated with the height of natural regeneration, but these were not associated with other factors. Height of natural regeneration was found to be correlated to stand density, crown area and crown class, whereas tree height and BHD did not have any association with other factors. Overall, the results of the investigation are helpful in understanding the change in the structure of Korean fir natural forest. Further investigation with more plots is required.

Fauna Diversity at the Deukjin River, Hapcheon-gun, Korea (합천군 덕진천의 동물상에 대한 다양성)

  • Huh, Man Kyu
    • Journal of Life Science
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    • v.28 no.1
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    • pp.105-109
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    • 2018
  • Biodiversity (or biological diversity) is defined as the variability of living organisms, the "diversity of life on Earth," and the complex relationships that make up ecosystems. This study aimed to investigate the spatial and temporal patterns in animal species composition and diversity at the Deukjin River, located in Hapcheon Province, Korea. The fauna community at the Deukjin River during 2016 season was identified with a total of 55 taxa, representing the following six classes: Mammalia (mammals), Actinopterygii (bony fish), Chondrichthyes (cartilaginous fish), Aves (birds), Amphibia (amphibians), Reptilia (reptiles), and invertebrates. The Berger - Parker index (BPI) for mammals varied from 0.233 (Station A) to 0.333 (Station D). The Shannon - Weaver index (H') and two diversity indexes (N1 and N2) for mammals and birds in the upper region were higher than those in the lower region. The values of ${\beta}$-diversity for animals varied from 0.229 for fish to 0.339 for invertebrates. The richness indices for animal taxa also varied among the stations and seasons. Station A showed considerably high richness in mammals, birds, and reptiles/amphibians. Although the richness indices (R1 and R2) for six animal kingdoms during the seasons were different from each other, the difference was not significant (p<0.05). The evenness indices for five animal kingdoms were different from each other, but again, the difference was not significant (p<0.05).

Species Composition and Diversity in Mid-altitudinal Moist Temperate Forests of the Western Himalaya

  • Gairola, Sumeet;Sharma, C.M.;Suyal, Sarvesh;Ghildiya, S.K.
    • Journal of Forest and Environmental Science
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    • v.27 no.1
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    • pp.1-15
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    • 2011
  • The present study was undertaken in middle altitudinal (1500 to 2500 masl) moist temperate forest of Mandal-Chopta area in the Garhwal region of Uttarakhand, India. The aim of the present study was to assess the variation in species composition and diversity in different vegetation layers viz. herb, shrub and tree, at different altitudes. Shannon-Wiener diversity index ($\bar{H}$), $Nha^{-1}$, total basal cover per hectare (G), Simpson concentration of dominance, Pielou Equitability, species richness (SR), Margalef index, Menheink index of species richness and ${\beta}$-diversity were calculated to understand community composition. Tree G ranged from 84.25 to 35.08 $m^2ha^{-1}$ and total stem density varied from 990 to 1470 Nha-1. Total SR (herb, shrub and trees) among different forest types ranged between 31 and 58. Maximum G of herb and shrub layers was recorded at lower altitudes between 1500 and 1650 masl. ${\beta}$-diversity was higher in herb layers as compared to tree and shrub layers. Dominance-diversity curves were also drawn to ascertain resource apportionment among various species in different forest types. Values of species diversity, $\bar{H}$, $Nha^{-1}$ and G were higher in the study area as compared to similar forests growing in other parts of Uttarakhand Himalaya.

Multi-metric Index Assessments of Fish Model and Comparative Analysis of Community (남한강 상류 수계에서 어류의 다변수 모델 지수 산정 및 군집지수와의 비교평가)

  • Lee, Jae-Hoon;Hong, Young-Pyo;An, Kwang-Guk
    • Korean Journal of Ecology and Environment
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    • v.40 no.2
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    • pp.327-336
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    • 2007
  • This study assessed ecological health using a multi-metric fish model from 15 sites in the headwater watershed of southern Han River during June${\sim}$August 1999 and then compared the health with conventional community diversity index to figure out differences between health and diversity index. For the analysis, we adopted 10 metric IBI model for regional applications. During this survey, total number of species sampled were 24 (6 families) and varied depending on magnitude of ecological disturbance and stream order. In the mountainous streams, mean proportion of sensitive and insectivore species was composed of 91% and 56%, respectively, indicating a potential healthy conditions. However, tolerant species with 66% and omnivore species with 76% were sampled from the 2nd order stream, which was shown deterioration in the physical habitat quality. In the overall watershed, mean IBI value was 38, judging as "fair" condition by the health criteria. Values of Individual IBI were closely associated with stream order and this pattern was similar to other mountainous streams showing low chemical pollutions and disturbance. Our comparison between IBI and diversity index over the stream order showed a distinct difference; Shannon-Weaver diversity index overestimated the actual community conditions and the variation range in the 2nd order stream was greater in the diversity index. Overall data suggest that the multi-metric approach may to a useful tool for stream ecosystem management and the conventional diversity index may not effective unless the stream order is considered for the stream evaluation.

Phylogenetic Analysis and Diversity of Marine Bacteria Isolated from Rhizosphere Soils of Halophyte in Suncheon Bay (순천만에 자생하는 염생식물 근권에서 유래한 해양세균의 계통학적 분석 및 다양성)

  • You, Young-Hyun;Park, Jong Myong;Lee, Myung-Chul;Kim, Jong-Guk
    • Microbiology and Biotechnology Letters
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    • v.43 no.1
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    • pp.65-78
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    • 2015
  • The bacterial diversity of the rhizosphere soil of S. japonica native to Suncheon bay was analyzed. Ninety two strains showing different morphological characteristics were isolated from the soils around the community of S. japonica. Bacterial diversity and distributions were studied by phylogenetic analysis of the partial 16S rDNA sequences. Ninety two strains were partially sequenced and analyzed phylogenetically. These strains were composed of 5 phyla firmicutes (56.5%), gamma-proteobacteria (29.3%), alpha-proteobacteria (5.4%), actinobacteria (5.4%), bacteroidetes (3.3%) and Shannon’s diversity index (H') were different from each of sampling sites (1.675, 1.924 and 2.04). Eleven isolates were presumed to be novel species candidates based on similarity analysis of the 16s rRNA gene sequences. Overall, Firmicutes and gamma-proteobacteria of the rhizosphere soil of S. japonica showed a high diversity.

Topic Modeling based Interdisciplinarity Measurement in the Informatics Related Journals (토픽 모델링 기반 정보학 분야 학술지의 학제성 측정 연구)

  • Jin, Seol A;Song, Min
    • Journal of the Korean Society for information Management
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    • v.33 no.1
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    • pp.7-32
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    • 2016
  • This study has measured interdisciplinarity using a topic modeling, which automatically extracts sub-topics based on term information appeared in documents group unlike the traditional top-down approach employing the references and classification system as a basis. We used titles and abstracts of the articles published in top 20 journals for the past five years by the 5-year impact factor under the category of 'Information & Library Science' in JCR 2013. We applied 'Discipline Diversity' and 'Network Coherence' as factors in measuring interdisciplinarity; 'Shannon Entropy Index' and 'Stirling Diversity Index' were used as indices to gauge diversity of fields while topic network's average path length was employed as an index representing network cohesion. After classifying the types of interdisciplinarity with the diversity and cohesion indices produced, we compared the topic networks of journals that represent each type. As a result, we found that the text-based diversity index showed different ranking when compared to the reference-based diversity index. This signifies that those two indices can be utilized complimentarily. It was also confirmed that the characteristics and interconnectedness of the sub-topics dealt with in each journal can be intuitively understood through the topic networks classified by considering both the diversity and cohesion. In conclusion, the topic modeling-based measurement of interdisciplinarity that this study proposed was confirmed to be applicable serving multiple roles in showing the interdisciplinarity of the journals.

Analysis of energy security by the diversity indices: A case study of South Korea (다양성지수를 통한 에너지안보수준 분석: 한국사례를 중심으로)

  • Jang, Yong-Chul;Bang, Ki-Yual;Lee, Kwan-Young;Kim, Kyung Nam
    • Journal of Energy Engineering
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    • v.23 no.2
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    • pp.93-101
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    • 2014
  • How to determine the extent of national energy security? In this paper, we estimate it by comparative analysis of South Korea and other OECD countries in terms of energy diversity (fuel diversity). Energy security consists of 4 key factors such as availability, accessibility, acceptability, affordability. Especially the importance of accessibility can grow as local imbalance of supply and demand increases. As a proxy of the accessibility, fuel diversity can be a significant indicator to estimate a measure of energy security. In this paper, we use Shannon-Wiener index to measure energy diversity. If fuel diversity increases, the stability of energy security also should increase, because of the smoothing effect to lessen dependence on key energy sources. In 2012 Korean growth rate of H-index (energy diversity) is 18.38%, which is higher than other OECD countries. However, Korean H-index itself is 1.93, lesser than other countries. Shift from oil to coals/gas within fossil fuels has more impact on H-index than weight transition from fossil fuels to renewable energies in Korea. We conclude that more renewable energy is an effective solution to achieve higher energy diversity and ultimately higher energy security as the same as the German case.

Comparison of Bacterial Diversity in the Water Columns of Goseong Deep Seawaters (고성 심해에서 수심에 따른 해양미생물의 다양성 비교)

  • Khang, Yongho
    • Korean Journal of Microbiology
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    • v.49 no.3
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    • pp.282-285
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    • 2013
  • Microbial diversities in the 300 m and 500 m deep seawaters near Goseong, Gangwon Province (South Korea), were investigated. Pyrosequencing of 16S rRNA genes of marine microbes resulted in 19,474 reads from the 300 m deep seawaters, which consisted of Alphaproteobacteria (57.41%) and Gammaproteobacteria (38.85%), and 82,806 reads from the 500 m deep seawaters, which consisted of Gammaproteobacteria (99.64%) mostly. Rhodobacterales (57.31%) were dominant in the 300 m deep seawaters, but Alteromonadales (45.65%) and Oceanospirillales (34.61%) were dominant in the 500 m deep seawaters. On the bases of operational taxonomic units and diversity indexes (Shannon and Simpson), biodiversity of marine bacteria in the 500 m deep seawaters was shown to be higher than that in the 300 m deep seawaters.