• Title/Summary/Keyword: Selineae

Search Result 2, Processing Time 0.015 seconds

Phylotranscriptomics of the Subfamily Apioideae (Apiaceae) (전사체 데이터에 의한 산형아과 (Apioideae)의 계통과 적응진화)

  • Eun Mi Lee;SeonJoo Park
    • Proceedings of the Plant Resources Society of Korea Conference
    • /
    • 2023.04a
    • /
    • pp.11-11
    • /
    • 2023
  • Due to the abundance of information in Nuclear DNA, it has a magnificent phylogenetic resolution. Moreover, because they show biparental inheritance, it has proven to be superior to organelle DNA, which has a limited number of genes and only shows maternal lineage. In particular, the transcriptome, which includes much nuclear DNA but is relatively inexpensive to analyze, can provide valuable insights into evolution through selection analysis and enable gene function research. This study's dataset includes 45 transcriptomes (16 generated for this study). It aims to explore the evolutionary history of Apioideae by comparing the results of the phylogenetic analysis with gene tree discordance and chloroplast phylogeny. The results confirmed the taxonomic positions of Peucedanum terebinthaceum, Ligusticum tachiroei, and Cymopterus melanotilingia and proposed a genus change for Glehnia littoralis. High gene tree discordances were identified in recently diverged clades, suggesting frequent hybridization and introgression. In the most recently diverged tribe of Selineae, the highest number of PSGs (positively selected genes) has been confirmed, which is inferred to be due to the geological and climatic diversity of their originated habitat, Central Asia. These genes include those related to responses to growth and drought, oxidative, and salt stress. In particular, the CYP97A gene confirmed as PSGs in Bupleurum latissimum is inferred to be a result of adaptation to the light-limited environment of Ulleungdo Island, as it is associated with the efficiency of photosynthesis.

  • PDF

A comparative study about the origins of Apiaceae (Umbelliferae) taxa in the Pharmacopoeias of five Northeast-Asian countries based on the taxonomic concepts (분류학적 개념을 기반으로 한 동북아 5개국 공정서 미나리과(산형과) 기원종 비교 연구)

  • Song, Jun-Ho;Yang, Sungyu;Kim, Hong Bin;Choi, Goya
    • The Korea Journal of Herbology
    • /
    • v.36 no.3
    • /
    • pp.25-37
    • /
    • 2021
  • Objectives : Herbal medicines have been used a lot traditionally in Northeast Asia. In particular, various Apiaceae plants (Umbelliferae) are widely used for medicinal purposes among countries. However, the original species designated in each pharmacopoeia standards, are sometimes different and confuse. In this study, herbal medicines in the pharmacopoeia were analyzed for Apiaceae taxa to compare the taxonomic identity and different taxonomic opinions for each country based on their local flora and recent taxonomic studies. Methods : The scientific names of herbal medicines were analyzed origins from Pharmacopoeias of Republic of Korea, Democratic People's Republic of Korea, People's Republic of China, Taiwan, and Japan. Especially, we compared their local floras, international plant scientific name database, and recently published taxonomic studies to confirm the correct scientific name. Results : The analyzed apiaceous herbal medicines in pharmacopoeias were all 21 items and 39 taxa; the highest percentage, genus Angelica (21%) and roots including rhizomes (62%) the registered genera and medicinal parts, respectively. Eleven items were in all five country's pharmacopoeias. Four items were in more than two countries' pharmacopoeias. Six items were registered in only one pharmacopoeia. Conclusions : Our research provides necessary information, e.g., corrected scientific names of original species based on taxonomic species concepts, taxonomic reviews, and figures of medicines. These results will help in the understanding of the apiaceous taxa among the five countries' pharmacopoeias. Moreover, these extensive nomenclatural reviews of authentic apiaceous taxa will help for the next revision of Korea Pharmacopoeia.