• Title/Summary/Keyword: Secondary resonance

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Backbone 1H, 15N, and 13C resonance assignments and secondary structure prediction of NifU-like protein, HP1492 from Helicobacter Pylori

  • Lee, Ki-Young;Kang, Su-Jin;Bae, Ye-Ji;Lee, Kyu-Yeon;Kim, Ji-Hun;Lee, Ingyun;Lee, Bong-Jin
    • Journal of the Korean Magnetic Resonance Society
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    • v.17 no.2
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    • pp.105-110
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    • 2013
  • HP1492 is a NifU-like protein of Helicobacter pylori (H. pylori) and plays a role as a scaffold which transfer Fe-S cluster to Fe-S proteins like Ferredoxin. To understand how to bind to iron ion or iron-sulfur cluster, HP1492 was expressed and purified in Escherichia coli (E. coli). From the NMR measurement, we could carry out the sequence specific backbone resonance assignment of HP1492. Approximately 91% of all resonances could be assigned unambiguously. By analyzing results of CSI and TALOS from NMR data, we could predict the secondary structure of HP1492, which consists of three ${\alpha}$-helices and three ${\beta}$-sheets. This study is an essential step towards the structural characterization of HP1492.

Wernicke's Encephalopathy with Intracranial Hemorrhage

  • Jeon, Sunghee;Kang, Hyunkoo
    • Investigative Magnetic Resonance Imaging
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    • v.20 no.1
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    • pp.71-74
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    • 2016
  • Wernicke's encephalopathy (WE) is an acute neurological disorder resulting from thiamine deficiency. Early diagnosis and treatment of WE is important to avoid persistent brain damage. Although histopathologic examination usually demonstrates pin-point hemorrhages in affected brain parenchyma, secondary hemorrhage is a rare but serious complication of WE. We experienced a rare case of intracranial hemorrhage related to WE in a 56-year-old male patient with malnourishment.

Backbone 1H, 15N, and 13C Resonance Assignment and Secondary Structure Prediction of HP0495 from Helicobacter pylori

  • Seo, Min-Duk;Park, Sung-Jean;Kim, Hyun-Jung;Seok, Seung-Hyeon;Lee, Bong-Jin
    • BMB Reports
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    • v.40 no.5
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    • pp.839-843
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    • 2007
  • HP0495 (Swiss-Prot ID; Y495_HELPY) is an 86-residue hypothetical protein from Helicobacter pylori strain 26695. The function of HP0495 cannot be identified based on sequence homology, and HP0495 is included in a fairly unique sequence family. Here, we report the sequencespecific backbone resonance assignments of HP0495. About 97% of all the $^1HN$, $^{15}N$, $^{13}C{\alpha}$, $^{13}C{\beta}$, and $^{13}CO$ resonances were assigned unambiguously. We could predict the secondary structure of HP0495, by analyzing the deviation of the $^{13}C{\alpha}$ and $^{13}C{\beta}$ shemical shifts from their respective random coil values. Secondary structure prediction shows that HP0495 consists of two $\alpha$-helices and four $\beta$-strands. This study is a prerequisite for determining the solution structure of HP0495 and investigating the protein-protein interaction between HP0495 and other Helicobacter pylori proteins.

EMI Noise Source Reduction of Single-Ended Isolated Converters Using Secondary Resonance Technique

  • Chen, Zhangyong;Chen, Yong;Chen, Qiang;Jiang, Wei;Zhong, Rongqiang
    • Journal of Power Electronics
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    • v.19 no.2
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    • pp.403-412
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    • 2019
  • Aiming at the problems of large dv/dt and di/dt in traditional single-ended converters and high electromagnetic interference (EMI) noise levels, a single-ended isolated converter using the secondary resonance technique is proposed in this paper. In the proposed converter, the voltage stress of the main power switch can be reduced and the voltage across the output diode is clamped to the output voltage when compared to the conventional flyback converter. In addition, the peak current stress through the main power switch can be decreased and zero current switching (ZCS) of the output diode can be achieved through the resonance technique. Moreover, the EMI noise coupling path and an equivalent model of the proposed converter topology are presented through the operational principle of the proposed converter. Analysis results indicate that the common mode (CM) EMI noise and the differential mode (DM) EMI noise of such a converter are deduced since the frequency spectra of the equivalent controlled voltage sources and controlled current source are decreased when compared with the traditional flyback converter. Furthermore, appropriate parameter selection of the resonant circuit network can increase the equivalent impedance in the EMI coupling path in the low frequency range, which further reduces the common mode interference. Finally, a simulation model and a 60W experimental prototype of the proposed converter are built and tested. Experimental results verify the theoretical analysis.

Secondary Intracranial Tumor Associated with Nasal Adenocarcinoma in a Dog: Clinical, Computed Tomography, Magnetic Resonance Imaging, Histopathologic Findings (개에서 발생한 비강샘암종으로부터 유래한 이차성 두개 내 종양 증례)

  • Lee, Jung-Ha;Yoon, Hun-Young;Im, Keum-Soon;Sur, Jung-Hyang;Jeong, Soon-Wuk
    • Journal of Veterinary Clinics
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    • v.30 no.3
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    • pp.206-209
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    • 2013
  • A 12-year-old castrated male Miniature Schnauzer dog was presented with an acute seizure. On computed tomography, a mass was observed in the left nasal cavity and the lysis of the left cribriform plate was identified. Post-contrast magnetic resonance imaging showed a hyperintense mass in the left frontal lobe and hyperintense lesions in the left frontal sinus. The mass was tentatively diagnosed with a brain tumor secondary to a nasal tumor. Histopathology revealed that the mass was a nasal adenocarcinoma with invasion into the brain. This case report describes clinical, computed tomography, magnetic resonance imaging and histopathological findings of secondary intracranial tumor caused by extension of nasal adenocarcinoma in a dog. These findings may contribute to enhance the knowledge on secondary intracranial tumors in dogs.

Free vibration of primary-secondary structures with multiple connections (다중 지지된 주-부 구조물의 자유진동)

  • 민경원
    • Proceedings of the Computational Structural Engineering Institute Conference
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    • 1991.10a
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    • pp.63-68
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    • 1991
  • The frequency window method has been extended to include strong coupling and multiple connections between the primary structure and the secondary structures. The rational polynomial expansion of the eigenvalue problem and the analytical methods for its solution are novel and distinguish this work from other eigenvalue analysis methods. The key results are the identification of parameters which quantify the resonance and coupling characteristics; the derivation of analytical dosed-form expressions describing the fundamental modal properties of the frequency windows; and the development of an iterative procedure which yields accurate convergent results for strongly-coupled primary-secondary structures.

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Application of multi dimensional NMR experiments to VBS RNAs of Yeast Saccaromyces cerevisiae virus

  • Chaejoon Cheong;Cheong, Hae-Kap;Yoo, Jun-Seok
    • Journal of the Korean Magnetic Resonance Society
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    • v.5 no.1
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    • pp.29-36
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    • 2001
  • The structures of two VBS (viral binding site) RNAs, SL1 and SL2, of Yeast Saccharomyces cerevisiae vims have been studied by 2D and 3D NMR experiments. VBSs play a crucial role in viral particle binding to the plus strand and packaging of the RNA. The secondary structures of the two VBS RNAs share a common feature of the stem-internal loop-stem-hairpin loop structure although the size of the internal loops of SL1 and SL2 differs. 2D experiments were sufficient for fill assignments of SL1. However, isotope labeling of the sample and multidimensional experiments were required for 28-nucleotide-long SL2 due to the spectral overlap. Several 3D HCCH experiments have accomplished full assignment of SL2 RNA.

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Measurement and Control of the Resonance Frequency for the Transcutaneous Energy Transmission System (TET) Using the Phase Locked Loop Circuit (PLL) (PLL을 이용한 무선 전력전송 장치의 공진 주파수의 계측 및 주파수 제어)

  • Choi, S.W.;Shim, E.B.
    • Proceedings of the KSME Conference
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    • 2008.11a
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    • pp.1613-1616
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    • 2008
  • A Transcutaneous Energy Transmission System (TET) has been developed for the wireless energy transmission with two magnetically coupled coils. A resonance circuit is used to raise the induced voltage and current of the secondary coil. Its resonance frequency depends on the internal resistance of circuit and the transferred energy. Because the transferred energy usually changes in wide range, the output voltage is unstable and the energy transferring efficiency decrease. A push-pull class E amplifier is usedto generate high frequency AC voltage. To maintain proper resonance frequency, the voltage output of the amplifier was continuously monitored and adjusted to the optimized resonance frequency. Because of its high frequency (370 kHz), a phase lockedloop circuit and a comparator are used to monitor the output waveform. The results of experimentaldata show that the PLL circuit can increase the transmission efficiency and stabilize the output voltage of TET.

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Experimental study on moonpool resonance of offshore floating structure

  • Yang, Seung-Ho;Kwon, Sun-Hong
    • International Journal of Naval Architecture and Ocean Engineering
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    • v.5 no.2
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    • pp.313-323
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    • 2013
  • Offshore floating structures have so-called moonpool in the centre area for the purpose of drilling, installation of subsea structures, recovery of Remotely-Operated Vehicle (ROV) and divers. However, this vertical opening has an effect on the operating performance of floating offshore structure in the vicinity of moonpool resonance frequency; piston mode and sloshing mode. Experimental study based on model test was carried out. Moonpool resonance of floating offshore structure on fixed condition and motion free condition were investigated. And, the effect of cofferdam which is representative inner structure inside moonpool was examined. Model test results showed that Molin's theoretical formula can predict moonpool resonance on fixed condition quite accurately. However, motion free condition has higher resonance frequency when it is compared with that of motion fixed. The installation of cofferdam moves resonance frequency to higher region and also generates secondary resonance at lower frequency. Furthermore, it was found that cofferdam was the cause of generating waves in the longitudinal direction when the vessel was in beam sea.

Backbone 1H, 15N, and 13C Resonance Assignments and Secondary Structure of a Novel Protein OGL-20PT-358 from Hyperthermophile Thermococcus thioreducens sp. nov.

  • Wilson, Randall C.;Hughes, Ronny C.;Curto, Ernest V.;Ng, Joseph D.;Twigg, Pamela D.
    • Molecules and Cells
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    • v.24 no.3
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    • pp.437-440
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    • 2007
  • $OGL-20P^T$-358 is a novel 66 amino acid residue protein from the hyperthermophile Thermococcus thioreducens sp. nov., strain $OGL-20P^T$, which was collected from the wall of the hydrothermal black smoker in the Rainbow Vent along the mid-Atlantic ridge. This protein, which has no detectable sequence homology with proteins or domains of known function, has a calculated pI of 4.76 and a molecular mass of 8.2 kDa. We report here the backbone $^1H$, $^{15}N$, and $^{13}C$ resonance assignments of $OGL-20P^T$-358. Assignments are 97.5% (316/324) complete. Chemical shift index was used to determine the secondary structure of the protein, which appears to consist of primarily ${\alpha}$-helical regions. This work is the foundation for future studies to determine the three-dimensional solution structure of the protein.